RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 UQCRQO14949 82 aa7.6□□□□□ -1.19
SEC13-209ENST00000397117 CXCL6P80162 114 aa7.59□□□□□ -1.19
SEC13-209ENST00000397117 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
SEC13-209ENST00000397117 A0A087WVE0 104 aa7.57□□□□□ -1.2
SEC13-209ENST00000397117 COX7CP15954 63 aa7.57□□□□□ -1.2
SEC13-209ENST00000397117 Q5XG85 94 aa7.57□□□□□ -1.2
SEC13-209ENST00000397117 BPY2O14599 106 aa7.56□□□□□ -1.2
SEC13-209ENST00000397117 ASB16-AS1Q495Z4 193 aa7.56□□□□□ -1.2
SEC13-209ENST00000397117 DEFB116Q30KQ4 102 aa7.55□□□□□ -1.2
SEC13-209ENST00000397117 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
SEC13-209ENST00000397117 PRR4Q16378 134 aa7.54□□□□□ -1.2
SEC13-209ENST00000397117 SERP2Q8N6R1 65 aa7.54□□□□□ -1.2
SEC13-209ENST00000397117 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
SEC13-209ENST00000397117 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
SEC13-209ENST00000397117 J3KT08 172 aa7.52□□□□□ -1.2
SEC13-209ENST00000397117 Q96NJ1 140 aa7.52□□□□□ -1.2
SEC13-209ENST00000397117 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
SEC13-209ENST00000397117 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
SEC13-209ENST00000397117 C1orf195Q5TG92 126 aa7.5□□□□□ -1.21
SEC13-209ENST00000397117 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
SEC13-209ENST00000397117 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
SEC13-209ENST00000397117 NDUFB1O75438 58 aa7.48□□□□□ -1.21
SEC13-209ENST00000397117 DSCR10P59022 87 aa7.47□□□□□ -1.21
SEC13-209ENST00000397117 A8MWP4 228 aa7.46□□□□□ -1.21
SEC13-209ENST00000397117 Q8N9L7 120 aa7.45□□□□□ -1.22
SEC13-209ENST00000397117 K7EQZ3 153 aa7.44□□□□□ -1.22
SEC13-209ENST00000397117 RETNLBQ9BQ08 111 aa7.44□□□□□ -1.22
SEC13-209ENST00000397117 PRR15Q8IV56 129 aa7.43□□□□□ -1.22
SEC13-209ENST00000397117 TRAV7A0A075B6U4 112 aa7.42□□□□□ -1.22
SEC13-209ENST00000397117 IGHV6-1A0A0B4J1U7 121 aa7.41□□□□□ -1.22
SEC13-209ENST00000397117 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
SEC13-209ENST00000397117 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
SEC13-209ENST00000397117 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
SEC13-209ENST00000397117 TMEM258P61165 79 aa7.38□□□□□ -1.23
SEC13-209ENST00000397117 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
SEC13-209ENST00000397117 HCG22E2RYF7 251 aa7.35□□□□□ -1.23
SEC13-209ENST00000397117 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
SEC13-209ENST00000397117 C8orf17Q9NRJ1 99 aa7.35□□□□□ -1.23
SEC13-209ENST00000397117 LINC00313P59037 77 aa7.34□□□□□ -1.23
SEC13-209ENST00000397117 KLKP1Q107X0 134 aa7.34□□□□□ -1.24
SEC13-209ENST00000397117 IGLV7-46A0A075B6I9 117 aa7.33□□□□□ -1.24
SEC13-209ENST00000397117 NDUFC1O43677 76 aa7.33□□□□□ -1.24
SEC13-209ENST00000397117 WFDC13Q8IUB5 93 aa7.33□□□□□ -1.24
SEC13-209ENST00000397117 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
SEC13-209ENST00000397117 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
SEC13-209ENST00000397117 CASC2Q6XLA1 102 aa7.32□□□□□ -1.24
SEC13-209ENST00000397117 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
SEC13-209ENST00000397117 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
SEC13-209ENST00000397117 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
SEC13-209ENST00000397117 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
SEC13-209ENST00000397117 C9orf92A6NGG3 77 aa7.29□□□□□ -1.24
SEC13-209ENST00000397117 TPRXLQ17RH7 258 aa7.29□□□□□ -1.24
SEC13-209ENST00000397117 H7BZZ5 65 aa7.28□□□□□ -1.24
SEC13-209ENST00000397117 TMEM254Q8TBM7 123 aa7.27□□□□□ -1.25
SEC13-209ENST00000397117 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
SEC13-209ENST00000397117 NDUFS5O43920 106 aa7.23□□□□□ -1.25
SEC13-209ENST00000397117 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
SEC13-209ENST00000397117 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
SEC13-209ENST00000397117 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
SEC13-209ENST00000397117 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
SEC13-209ENST00000397117 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
SEC13-209ENST00000397117 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
SEC13-209ENST00000397117 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
SEC13-209ENST00000397117 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
SEC13-209ENST00000397117 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
SEC13-209ENST00000397117 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
SEC13-209ENST00000397117 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
SEC13-209ENST00000397117 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
SEC13-209ENST00000397117 XP32Q5T750 250 aa7.15□□□□□ -1.27
SEC13-209ENST00000397117 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.27
SEC13-209ENST00000397117 A8MUU9 505 aa7.14□□□□□ -1.27
SEC13-209ENST00000397117 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
SEC13-209ENST00000397117 Q75L30 129 aa7.13□□□□□ -1.27
SEC13-209ENST00000397117 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
SEC13-209ENST00000397117 H3BPC8 53 aa7.12□□□□□ -1.27
SEC13-209ENST00000397117 MP68P56378 58 aa7.1□□□□□ -1.27
SEC13-209ENST00000397117 RPL37P61927 97 aaKnown RBP7.09□□□□□ -1.27
SEC13-209ENST00000397117 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
SEC13-209ENST00000397117 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
SEC13-209ENST00000397117 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
SEC13-209ENST00000397117 H0Y9P7 68 aa7.06□□□□□ -1.28
SEC13-209ENST00000397117 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
SEC13-209ENST00000397117 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
SEC13-209ENST00000397117 Q5W150 140 aa7.05□□□□□ -1.28
SEC13-209ENST00000397117 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
SEC13-209ENST00000397117 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
SEC13-209ENST00000397117 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
SEC13-209ENST00000397117 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
SEC13-209ENST00000397117 PCOTHQ58A44 107 aa6.98□□□□□ -1.29
SEC13-209ENST00000397117 LOC101927531A0A1B0GV80 90 aa6.98□□□□□ -1.29
SEC13-209ENST00000397117 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
SEC13-209ENST00000397117 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
SEC13-209ENST00000397117 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
SEC13-209ENST00000397117 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
SEC13-209ENST00000397117 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
SEC13-209ENST00000397117 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
SEC13-209ENST00000397117 MT1HP80294 61 aa6.94□□□□□ -1.3
SEC13-209ENST00000397117 C7orf65Q6ZTY9 151 aa6.93□□□□□ -1.3
SEC13-209ENST00000397117 SPINK7P58062 85 aa6.91□□□□□ -1.3
SEC13-209ENST00000397117 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms