RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FAM236CP0DP71 79 aa8.81□□□□□ -1
EXOSC3-202ENST00000396521 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
EXOSC3-202ENST00000396521 LINC00846Q9NV44 126 aa8.79□□□□□ -1
EXOSC3-202ENST00000396521 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
EXOSC3-202ENST00000396521 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
EXOSC3-202ENST00000396521 MTURNQ8N3F0 131 aa8.77□□□□□ -1.01
EXOSC3-202ENST00000396521 DSCR8Q96T75 97 aa8.77□□□□□ -1.01
EXOSC3-202ENST00000396521 H3BT86 120 aa8.76□□□□□ -1.01
EXOSC3-202ENST00000396521 LCE2BO14633 110 aa8.76□□□□□ -1.01
EXOSC3-202ENST00000396521 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
EXOSC3-202ENST00000396521 JMJD7-PLA2G4BH0Y9G9 81 aa8.75□□□□□ -1.01
EXOSC3-202ENST00000396521 K7EP34 96 aa8.75□□□□□ -1.01
EXOSC3-202ENST00000396521 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
EXOSC3-202ENST00000396521 MT1FP04733 61 aa8.74□□□□□ -1.01
EXOSC3-202ENST00000396521 CCKP06307 115 aa8.74□□□□□ -1.01
EXOSC3-202ENST00000396521 VPS25Q9BRG1 176 aa8.74□□□□□ -1.01
EXOSC3-202ENST00000396521 A0A087WSZ3 146 aa8.73□□□□□ -1.01
EXOSC3-202ENST00000396521 LINC00313P59037 77 aa8.72□□□□□ -1.01
EXOSC3-202ENST00000396521 GTF2H5Q6ZYL4 71 aa8.72□□□□□ -1.01
EXOSC3-202ENST00000396521 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.02
EXOSC3-202ENST00000396521 A0A1W2PNM2 257 aa8.71□□□□□ -1.02
EXOSC3-202ENST00000396521 DSCR10P59022 87 aa8.71□□□□□ -1.02
EXOSC3-202ENST00000396521 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
EXOSC3-202ENST00000396521 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
EXOSC3-202ENST00000396521 C14orf132Q9NPU4 83 aa8.68□□□□□ -1.02
EXOSC3-202ENST00000396521 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
EXOSC3-202ENST00000396521 KRTAP16-1A8MUX0 517 aa8.66□□□□□ -1.02
EXOSC3-202ENST00000396521 HRES1P13985 223 aa8.66□□□□□ -1.02
EXOSC3-202ENST00000396521 PDE6GP18545 87 aa8.66□□□□□ -1.02
EXOSC3-202ENST00000396521 C21orf62-AS1Q17RA5 79 aa8.64□□□□□ -1.03
EXOSC3-202ENST00000396521 Q6ZQT0 140 aa8.64□□□□□ -1.03
EXOSC3-202ENST00000396521 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
EXOSC3-202ENST00000396521 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
EXOSC3-202ENST00000396521 MACF1Q9UPN3 7388 aaKnown RBP8.6□□□□□ -1.03
EXOSC3-202ENST00000396521 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
EXOSC3-202ENST00000396521 KRTAP19-6Q3LI70 58 aa8.6□□□□□ -1.03
EXOSC3-202ENST00000396521 PRO0461Q9UI25 63 aa8.6□□□□□ -1.03
EXOSC3-202ENST00000396521 A0A1B0GW54 56 aa8.56□□□□□ -1.04
EXOSC3-202ENST00000396521 F8W1H4 67 aa8.56□□□□□ -1.04
EXOSC3-202ENST00000396521 SYNE2Q8WXH0 6885 aaKnown RBP8.53□□□□□ -1.04
EXOSC3-202ENST00000396521 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
EXOSC3-202ENST00000396521 IGHV6-1A0A0B4J1U7 121 aa8.51□□□□□ -1.05
EXOSC3-202ENST00000396521 A8MWP4 228 aa8.51□□□□□ -1.05
EXOSC3-202ENST00000396521 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
EXOSC3-202ENST00000396521 A0A1B0GV90 55 aa8.5□□□□□ -1.05
EXOSC3-202ENST00000396521 DEFB116Q30KQ4 102 aa8.5□□□□□ -1.05
EXOSC3-202ENST00000396521 ETDBQ3ZM63 59 aa8.49□□□□□ -1.05
EXOSC3-202ENST00000396521 J3KT08 172 aa8.48□□□□□ -1.05
EXOSC3-202ENST00000396521 NREPQ16612 68 aa8.48□□□□□ -1.05
EXOSC3-202ENST00000396521 SPINK7P58062 85 aa8.46□□□□□ -1.06
EXOSC3-202ENST00000396521 KRTAP6-3Q3LI67 103 aa8.46□□□□□ -1.06
EXOSC3-202ENST00000396521 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
EXOSC3-202ENST00000396521 A0A1B0GVX0 72 aa8.43□□□□□ -1.06
EXOSC3-202ENST00000396521 NDUFB1O75438 58 aa8.42□□□□□ -1.06
EXOSC3-202ENST00000396521 Q6ZVQ6 151 aa8.39□□□□□ -1.07
EXOSC3-202ENST00000396521 UBL5Q9BZL1 73 aa8.39□□□□□ -1.07
EXOSC3-202ENST00000396521 BPY2O14599 106 aa8.37□□□□□ -1.07
EXOSC3-202ENST00000396521 Q8N9P0 234 aaPredicted RBP8.35□□□□□ -1.07
EXOSC3-202ENST00000396521 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
EXOSC3-202ENST00000396521 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
EXOSC3-202ENST00000396521 K7EQZ3 153 aa8.3□□□□□ -1.08
EXOSC3-202ENST00000396521 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
EXOSC3-202ENST00000396521 C8orf17Q9NRJ1 99 aa8.3□□□□□ -1.08
EXOSC3-202ENST00000396521 ACYP1P07311 99 aa8.29□□□□□ -1.08
EXOSC3-202ENST00000396521 FAM240AA0A1B0GVK7 77 aa8.28□□□□□ -1.08
EXOSC3-202ENST00000396521 Q8N9L7 120 aa8.24□□□□□ -1.09
EXOSC3-202ENST00000396521 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
EXOSC3-202ENST00000396521 H1FX-AS1Q4G0G2 97 aa8.23□□□□□ -1.09
EXOSC3-202ENST00000396521 J3QR89 54 aa8.22□□□□□ -1.09
EXOSC3-202ENST00000396521 CXCL6P80162 114 aa8.21□□□□□ -1.1
EXOSC3-202ENST00000396521 TMEM254Q8TBM7 123 aa8.21□□□□□ -1.1
EXOSC3-202ENST00000396521 hDV103S1A0JD37 113 aa8.2□□□□□ -1.1
EXOSC3-202ENST00000396521 ATP5EP2Q5VTU8 51 aa8.19□□□□□ -1.1
EXOSC3-202ENST00000396521 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
EXOSC3-202ENST00000396521 NDUFS5O43920 106 aa8.17□□□□□ -1.1
EXOSC3-202ENST00000396521 CASC2Q6XLA1 102 aa8.17□□□□□ -1.1
EXOSC3-202ENST00000396521 HCG22E2RYF7 251 aa8.15□□□□□ -1.1
EXOSC3-202ENST00000396521 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
EXOSC3-202ENST00000396521 HIST1H4AP62805 103 aaKnown RBP8.08□□□□□ -1.12
EXOSC3-202ENST00000396521 NEBP20929 6669 aa8.07□□□□□ -1.12
EXOSC3-202ENST00000396521 A6NN06 94 aa8.06□□□□□ -1.12
EXOSC3-202ENST00000396521 K7ERU9 68 aa8.05□□□□□ -1.12
EXOSC3-202ENST00000396521 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
EXOSC3-202ENST00000396521 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
EXOSC3-202ENST00000396521 KRTAP20-1Q3LI63 56 aa8□□□□□ -1.13
EXOSC3-202ENST00000396521 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
EXOSC3-202ENST00000396521 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
EXOSC3-202ENST00000396521 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
EXOSC3-202ENST00000396521 A0A087WVE0 104 aa7.97□□□□□ -1.13
EXOSC3-202ENST00000396521 Q5VV11 94 aa7.97□□□□□ -1.13
EXOSC3-202ENST00000396521 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
EXOSC3-202ENST00000396521 MUC12Q9UKN1 5478 aa7.95□□□□□ -1.14
EXOSC3-202ENST00000396521 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
EXOSC3-202ENST00000396521 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
EXOSC3-202ENST00000396521 MT1BP07438 61 aa7.92□□□□□ -1.14
EXOSC3-202ENST00000396521 Q5W150 140 aa7.92□□□□□ -1.14
EXOSC3-202ENST00000396521 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
EXOSC3-202ENST00000396521 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
EXOSC3-202ENST00000396521 KRTAP5-9P26371 169 aa7.89□□□□□ -1.15
EXOSC3-202ENST00000396521 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms