RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
GTF2A2-202ENST00000396060 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
GTF2A2-202ENST00000396060 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
GTF2A2-202ENST00000396060 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
GTF2A2-202ENST00000396060 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
GTF2A2-202ENST00000396060 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
GTF2A2-202ENST00000396060 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
GTF2A2-202ENST00000396060 COX7CP15954 63 aa6.79□□□□□ -1.32
GTF2A2-202ENST00000396060 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
GTF2A2-202ENST00000396060 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
GTF2A2-202ENST00000396060 MMP24-AS1A0A0U1RRL7 71 aa6.78□□□□□ -1.32
GTF2A2-202ENST00000396060 UQCRQO14949 82 aa6.78□□□□□ -1.32
GTF2A2-202ENST00000396060 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
GTF2A2-202ENST00000396060 FAT3Q8TDW7 4589 aa6.76□□□□□ -1.33
GTF2A2-202ENST00000396060 TNXBP22105 4242 aa6.76□□□□□ -1.33
GTF2A2-202ENST00000396060 CASC2Q6XLA1 102 aa6.76□□□□□ -1.33
GTF2A2-202ENST00000396060 C8orf87E5RJ46 101 aa6.74□□□□□ -1.33
GTF2A2-202ENST00000396060 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
GTF2A2-202ENST00000396060 IGHV6-1A0A0B4J1U7 121 aa6.74□□□□□ -1.33
GTF2A2-202ENST00000396060 hDV103S1A0JD37 113 aa6.74□□□□□ -1.33
GTF2A2-202ENST00000396060 WFDC13Q8IUB5 93 aa6.74□□□□□ -1.33
GTF2A2-202ENST00000396060 CCDC179H3BU77 68 aa6.73□□□□□ -1.33
GTF2A2-202ENST00000396060 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
GTF2A2-202ENST00000396060 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
GTF2A2-202ENST00000396060 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
GTF2A2-202ENST00000396060 NOTCH2NLQ7Z3S9 236 aa6.7□□□□□ -1.34
GTF2A2-202ENST00000396060 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
GTF2A2-202ENST00000396060 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
GTF2A2-202ENST00000396060 LINC00313P59037 77 aa6.69□□□□□ -1.34
GTF2A2-202ENST00000396060 MRPL34Q9BQ48 92 aaKnown RBP6.69□□□□□ -1.34
GTF2A2-202ENST00000396060 OXTP01178 125 aa6.67□□□□□ -1.34
GTF2A2-202ENST00000396060 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
GTF2A2-202ENST00000396060 TP53AIP1Q9HCN2 124 aa6.67□□□□□ -1.34
GTF2A2-202ENST00000396060 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
GTF2A2-202ENST00000396060 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
GTF2A2-202ENST00000396060 KLKP1Q107X0 134 aa6.65□□□□□ -1.34
GTF2A2-202ENST00000396060 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
GTF2A2-202ENST00000396060 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
GTF2A2-202ENST00000396060 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
GTF2A2-202ENST00000396060 HERC2O95714 4834 aa6.62□□□□□ -1.35
GTF2A2-202ENST00000396060 A0A0U1RQV1 116 aa6.62□□□□□ -1.35
GTF2A2-202ENST00000396060 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
GTF2A2-202ENST00000396060 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
GTF2A2-202ENST00000396060 H3BPC8 53 aa6.61□□□□□ -1.35
GTF2A2-202ENST00000396060 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
GTF2A2-202ENST00000396060 XP32Q5T750 250 aa6.6□□□□□ -1.35
GTF2A2-202ENST00000396060 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
GTF2A2-202ENST00000396060 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
GTF2A2-202ENST00000396060 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
GTF2A2-202ENST00000396060 MP68P56378 58 aa6.59□□□□□ -1.35
GTF2A2-202ENST00000396060 NDUFC1O43677 76 aa6.58□□□□□ -1.36
GTF2A2-202ENST00000396060 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
GTF2A2-202ENST00000396060 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
GTF2A2-202ENST00000396060 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
GTF2A2-202ENST00000396060 NDUFS5O43920 106 aa6.57□□□□□ -1.36
GTF2A2-202ENST00000396060 H0Y9P7 68 aa6.56□□□□□ -1.36
GTF2A2-202ENST00000396060 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
GTF2A2-202ENST00000396060 SNURFQ9Y675 71 aa6.56□□□□□ -1.36
GTF2A2-202ENST00000396060 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
GTF2A2-202ENST00000396060 H7BZZ5 65 aa6.54□□□□□ -1.36
GTF2A2-202ENST00000396060 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
GTF2A2-202ENST00000396060 Q5W150 140 aa6.52□□□□□ -1.36
GTF2A2-202ENST00000396060 LINC00208Q96KT6 92 aa6.52□□□□□ -1.36
GTF2A2-202ENST00000396060 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
GTF2A2-202ENST00000396060 TMEM258P61165 79 aa6.52□□□□□ -1.37
GTF2A2-202ENST00000396060 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
GTF2A2-202ENST00000396060 A8MUU9 505 aa6.51□□□□□ -1.37
GTF2A2-202ENST00000396060 C1orf64Q8NEQ6 169 aa6.51□□□□□ -1.37
GTF2A2-202ENST00000396060 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
GTF2A2-202ENST00000396060 LOC101927531A0A1B0GV80 90 aa6.48□□□□□ -1.37
GTF2A2-202ENST00000396060 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
GTF2A2-202ENST00000396060 Q75L30 129 aa6.45□□□□□ -1.38
GTF2A2-202ENST00000396060 ATP5EP56381 51 aaPredicted RBP6.44□□□□□ -1.38
GTF2A2-202ENST00000396060 SPANXA2-OT1Q8N9U9 137 aa6.43□□□□□ -1.38
GTF2A2-202ENST00000396060 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
GTF2A2-202ENST00000396060 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
GTF2A2-202ENST00000396060 FAM236DA0A1B0GTK5 79 aa6.41□□□□□ -1.38
GTF2A2-202ENST00000396060 FAM236CP0DP71 79 aa6.41□□□□□ -1.38
GTF2A2-202ENST00000396060 TPRXLQ17RH7 258 aa6.4□□□□□ -1.39
GTF2A2-202ENST00000396060 PRR4Q16378 134 aa6.38□□□□□ -1.39
GTF2A2-202ENST00000396060 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
GTF2A2-202ENST00000396060 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
GTF2A2-202ENST00000396060 PCOTHQ58A44 107 aa6.34□□□□□ -1.39
GTF2A2-202ENST00000396060 ATP11AUNQ6ZP68 121 aa6.32□□□□□ -1.4
GTF2A2-202ENST00000396060 C7orf65Q6ZTY9 151 aa6.32□□□□□ -1.4
GTF2A2-202ENST00000396060 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
GTF2A2-202ENST00000396060 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
GTF2A2-202ENST00000396060 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
GTF2A2-202ENST00000396060 HRES1P13985 223 aa6.3□□□□□ -1.4
GTF2A2-202ENST00000396060 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
GTF2A2-202ENST00000396060 SPINK7P58062 85 aa6.27□□□□□ -1.41
GTF2A2-202ENST00000396060 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
GTF2A2-202ENST00000396060 LRP2P98164 4655 aa6.24□□□□□ -1.41
GTF2A2-202ENST00000396060 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
GTF2A2-202ENST00000396060 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
GTF2A2-202ENST00000396060 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
GTF2A2-202ENST00000396060 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
GTF2A2-202ENST00000396060 ACYP2P14621 99 aa6.2□□□□□ -1.42
GTF2A2-202ENST00000396060 LPAP08519 4548 aa6.2□□□□□ -1.42
GTF2A2-202ENST00000396060 A8MUN3 132 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms