RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
ITGB1-202ENST00000396033 CASC2Q6XLA1 102 aa7.15□□□□□ -1.26
ITGB1-202ENST00000396033 DYNC1H1Q14204 4646 aaKnown RBP7.15□□□□□ -1.27
ITGB1-202ENST00000396033 RYR2Q92736 4967 aa7.15□□□□□ -1.27
ITGB1-202ENST00000396033 A0A087X002 238 aa7.15□□□□□ -1.27
ITGB1-202ENST00000396033 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-202ENST00000396033 A0A1B0GVY2 172 aa7.13□□□□□ -1.27
ITGB1-202ENST00000396033 CD164Q04900 197 aa7.13□□□□□ -1.27
ITGB1-202ENST00000396033 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
ITGB1-202ENST00000396033 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
ITGB1-202ENST00000396033 CDK2AP2O75956 126 aa7.12□□□□□ -1.27
ITGB1-202ENST00000396033 A8MUN3 132 aa7.11□□□□□ -1.27
ITGB1-202ENST00000396033 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
ITGB1-202ENST00000396033 Q5VV11 94 aa7.11□□□□□ -1.27
ITGB1-202ENST00000396033 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
ITGB1-202ENST00000396033 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
ITGB1-202ENST00000396033 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.27
ITGB1-202ENST00000396033 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
ITGB1-202ENST00000396033 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
ITGB1-202ENST00000396033 C8orf17Q9NRJ1 99 aa7.08□□□□□ -1.28
ITGB1-202ENST00000396033 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
ITGB1-202ENST00000396033 SMR3BP02814 79 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-202ENST00000396033 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
ITGB1-202ENST00000396033 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
ITGB1-202ENST00000396033 MP68P56378 58 aa7.04□□□□□ -1.28
ITGB1-202ENST00000396033 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
ITGB1-202ENST00000396033 LCA10Q71F78 164 aa7.03□□□□□ -1.28
ITGB1-202ENST00000396033 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.29
ITGB1-202ENST00000396033 H0Y9P7 68 aa7.02□□□□□ -1.29
ITGB1-202ENST00000396033 NOTCH2NLQ7Z3S9 236 aa7.02□□□□□ -1.29
ITGB1-202ENST00000396033 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
ITGB1-202ENST00000396033 FAT1Q14517 4588 aa7□□□□□ -1.29
ITGB1-202ENST00000396033 NDUFS5O43920 106 aa7□□□□□ -1.29
ITGB1-202ENST00000396033 LINC00208Q96KT6 92 aa7□□□□□ -1.29
ITGB1-202ENST00000396033 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
ITGB1-202ENST00000396033 LIMD2Q9BT23 127 aa7□□□□□ -1.29
ITGB1-202ENST00000396033 C4orf48Q5BLP8 95 aa6.99□□□□□ -1.29
ITGB1-202ENST00000396033 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
ITGB1-202ENST00000396033 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
ITGB1-202ENST00000396033 H3BPC8 53 aa6.97□□□□□ -1.29
ITGB1-202ENST00000396033 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
ITGB1-202ENST00000396033 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-202ENST00000396033 SPINK1P00995 79 aa6.95□□□□□ -1.3
ITGB1-202ENST00000396033 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
ITGB1-202ENST00000396033 A6NN06 94 aa6.92□□□□□ -1.3
ITGB1-202ENST00000396033 LINC00313P59037 77 aa6.92□□□□□ -1.3
ITGB1-202ENST00000396033 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
ITGB1-202ENST00000396033 RYR3Q15413 4870 aa6.91□□□□□ -1.3
ITGB1-202ENST00000396033 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
ITGB1-202ENST00000396033 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
ITGB1-202ENST00000396033 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
ITGB1-202ENST00000396033 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
ITGB1-202ENST00000396033 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
ITGB1-202ENST00000396033 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
ITGB1-202ENST00000396033 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
ITGB1-202ENST00000396033 Q75L30 129 aa6.86□□□□□ -1.31
ITGB1-202ENST00000396033 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
ITGB1-202ENST00000396033 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
ITGB1-202ENST00000396033 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
ITGB1-202ENST00000396033 Q5W150 140 aa6.84□□□□□ -1.31
ITGB1-202ENST00000396033 SPTSSBQ8NFR3 76 aa6.83□□□□□ -1.32
ITGB1-202ENST00000396033 KRTAP16-1A8MUX0 517 aa6.83□□□□□ -1.32
ITGB1-202ENST00000396033 COA5Q86WW8 74 aa6.83□□□□□ -1.32
ITGB1-202ENST00000396033 HSPG2P98160 4391 aa6.83□□□□□ -1.32
ITGB1-202ENST00000396033 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
ITGB1-202ENST00000396033 SPINK7P58062 85 aa6.81□□□□□ -1.32
ITGB1-202ENST00000396033 Q5VSD8 79 aa6.81□□□□□ -1.32
ITGB1-202ENST00000396033 RETNLBQ9BQ08 111 aa6.8□□□□□ -1.32
ITGB1-202ENST00000396033 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
ITGB1-202ENST00000396033 ATP11AUNQ6ZP68 121 aa6.79□□□□□ -1.32
ITGB1-202ENST00000396033 RYR1P21817 5038 aa6.78□□□□□ -1.32
ITGB1-202ENST00000396033 A6NED7 52 aa6.76□□□□□ -1.33
ITGB1-202ENST00000396033 CDC42SE1Q9NRR8 79 aa6.75□□□□□ -1.33
ITGB1-202ENST00000396033 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
ITGB1-202ENST00000396033 HRES1P13985 223 aa6.73□□□□□ -1.33
ITGB1-202ENST00000396033 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
ITGB1-202ENST00000396033 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
ITGB1-202ENST00000396033 TNXBP22105 4242 aa6.71□□□□□ -1.34
ITGB1-202ENST00000396033 C9orf92A6NGG3 77 aa6.71□□□□□ -1.34
ITGB1-202ENST00000396033 IGKV2-30P06310 120 aa6.7□□□□□ -1.34
ITGB1-202ENST00000396033 Q8N1X5 172 aa6.7□□□□□ -1.34
ITGB1-202ENST00000396033 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
ITGB1-202ENST00000396033 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
ITGB1-202ENST00000396033 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
ITGB1-202ENST00000396033 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-202ENST00000396033 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
ITGB1-202ENST00000396033 C7orf65Q6ZTY9 151 aa6.67□□□□□ -1.34
ITGB1-202ENST00000396033 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
ITGB1-202ENST00000396033 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
ITGB1-202ENST00000396033 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
ITGB1-202ENST00000396033 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
ITGB1-202ENST00000396033 A8MUU9 505 aa6.62□□□□□ -1.35
ITGB1-202ENST00000396033 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
ITGB1-202ENST00000396033 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
ITGB1-202ENST00000396033 ACYP2P14621 99 aa6.58□□□□□ -1.36
ITGB1-202ENST00000396033 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-202ENST00000396033 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
ITGB1-202ENST00000396033 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
ITGB1-202ENST00000396033 XP32Q5T750 250 aa6.45□□□□□ -1.38
ITGB1-202ENST00000396033 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms