RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
CCT4-201ENST00000394440 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
CCT4-201ENST00000394440 HSPG2P98160 4391 aa8.65□□□□□ -1.02
CCT4-201ENST00000394440 NDUFB1O75438 58 aa8.64□□□□□ -1.03
CCT4-201ENST00000394440 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
CCT4-201ENST00000394440 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
CCT4-201ENST00000394440 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
CCT4-201ENST00000394440 WFDC13Q8IUB5 93 aa8.63□□□□□ -1.03
CCT4-201ENST00000394440 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
CCT4-201ENST00000394440 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
CCT4-201ENST00000394440 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
CCT4-201ENST00000394440 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
CCT4-201ENST00000394440 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
CCT4-201ENST00000394440 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
CCT4-201ENST00000394440 C20orf197Q8N268 126 aa8.59□□□□□ -1.03
CCT4-201ENST00000394440 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
CCT4-201ENST00000394440 C8orf17Q9NRJ1 99 aa8.58□□□□□ -1.04
CCT4-201ENST00000394440 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
CCT4-201ENST00000394440 H3BS24 57 aa8.57□□□□□ -1.04
CCT4-201ENST00000394440 SPINK1P00995 79 aa8.57□□□□□ -1.04
CCT4-201ENST00000394440 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
CCT4-201ENST00000394440 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
CCT4-201ENST00000394440 BRK1Q8WUW1 75 aa8.56□□□□□ -1.04
CCT4-201ENST00000394440 hDV103S1A0JD37 113 aa8.56□□□□□ -1.04
CCT4-201ENST00000394440 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
CCT4-201ENST00000394440 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
CCT4-201ENST00000394440 LINC00304Q8N9R0 145 aa8.54□□□□□ -1.04
CCT4-201ENST00000394440 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
CCT4-201ENST00000394440 NOTCH2NLQ7Z3S9 236 aa8.54□□□□□ -1.04
CCT4-201ENST00000394440 Q8N1X5 172 aa8.54□□□□□ -1.04
CCT4-201ENST00000394440 Q5VSD8 79 aa8.53□□□□□ -1.04
CCT4-201ENST00000394440 SPAG11AQ6PDA7 123 aa8.52□□□□□ -1.05
CCT4-201ENST00000394440 SNURFQ9Y675 71 aa8.51□□□□□ -1.05
CCT4-201ENST00000394440 PMAIP1Q13794 54 aa8.51□□□□□ -1.05
CCT4-201ENST00000394440 TMEM258P61165 79 aa8.48□□□□□ -1.05
CCT4-201ENST00000394440 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
CCT4-201ENST00000394440 H7BZZ5 65 aa8.48□□□□□ -1.05
CCT4-201ENST00000394440 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
CCT4-201ENST00000394440 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
CCT4-201ENST00000394440 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
CCT4-201ENST00000394440 NDUFC1O43677 76 aa8.43□□□□□ -1.06
CCT4-201ENST00000394440 LINC00313P59037 77 aa8.42□□□□□ -1.06
CCT4-201ENST00000394440 LRP1Q07954 4544 aaKnown RBP8.42□□□□□ -1.06
CCT4-201ENST00000394440 H0Y9P7 68 aa8.4□□□□□ -1.06
CCT4-201ENST00000394440 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.07
CCT4-201ENST00000394440 MP68P56378 58 aa8.4□□□□□ -1.07
CCT4-201ENST00000394440 TNXBP22105 4242 aa8.39□□□□□ -1.07
CCT4-201ENST00000394440 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
CCT4-201ENST00000394440 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
CCT4-201ENST00000394440 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
CCT4-201ENST00000394440 H3BPC8 53 aa8.38□□□□□ -1.07
CCT4-201ENST00000394440 NDUFS5O43920 106 aa8.38□□□□□ -1.07
CCT4-201ENST00000394440 FAT3Q8TDW7 4589 aa8.37□□□□□ -1.07
CCT4-201ENST00000394440 Q8N9P0 234 aaPredicted RBP8.37□□□□□ -1.07
CCT4-201ENST00000394440 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
CCT4-201ENST00000394440 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
CCT4-201ENST00000394440 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
CCT4-201ENST00000394440 C1orf64Q8NEQ6 169 aa8.31□□□□□ -1.08
CCT4-201ENST00000394440 Q5W150 140 aa8.31□□□□□ -1.08
CCT4-201ENST00000394440 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
CCT4-201ENST00000394440 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
CCT4-201ENST00000394440 HERC1Q15751 4861 aa8.27□□□□□ -1.08
CCT4-201ENST00000394440 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.09
CCT4-201ENST00000394440 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
CCT4-201ENST00000394440 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
CCT4-201ENST00000394440 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
CCT4-201ENST00000394440 SERP1Q9Y6X1 66 aa8.24□□□□□ -1.09
CCT4-201ENST00000394440 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
CCT4-201ENST00000394440 LOC101927531A0A1B0GV80 90 aa8.21□□□□□ -1.1
CCT4-201ENST00000394440 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
CCT4-201ENST00000394440 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CCT4-201ENST00000394440 J3QL48 77 aa8.19□□□□□ -1.1
CCT4-201ENST00000394440 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
CCT4-201ENST00000394440 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
CCT4-201ENST00000394440 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
CCT4-201ENST00000394440 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
CCT4-201ENST00000394440 A8MUU9 505 aa8.16□□□□□ -1.1
CCT4-201ENST00000394440 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
CCT4-201ENST00000394440 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
CCT4-201ENST00000394440 PRR4Q16378 134 aa8.13□□□□□ -1.11
CCT4-201ENST00000394440 Q75L30 129 aa8.07□□□□□ -1.12
CCT4-201ENST00000394440 IGKV2D-30A0A075B6S6 120 aa8.04□□□□□ -1.12
CCT4-201ENST00000394440 KTN1-AS1Q86SY8 53 aa8.04□□□□□ -1.12
CCT4-201ENST00000394440 HRES1P13985 223 aa8.03□□□□□ -1.12
CCT4-201ENST00000394440 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
CCT4-201ENST00000394440 A8MU10 97 aa7.99□□□□□ -1.13
CCT4-201ENST00000394440 XP32Q5T750 250 aa7.99□□□□□ -1.13
CCT4-201ENST00000394440 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.13
CCT4-201ENST00000394440 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
CCT4-201ENST00000394440 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
CCT4-201ENST00000394440 COA5Q86WW8 74 aa7.95□□□□□ -1.14
CCT4-201ENST00000394440 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
CCT4-201ENST00000394440 A0A0A0MQY5 61 aa7.9□□□□□ -1.14
CCT4-201ENST00000394440 A8MUN3 132 aa7.9□□□□□ -1.14
CCT4-201ENST00000394440 SPINK7P58062 85 aa7.9□□□□□ -1.15
CCT4-201ENST00000394440 ATP11AUNQ6ZP68 121 aa7.9□□□□□ -1.15
CCT4-201ENST00000394440 ACYP2P14621 99 aa7.88□□□□□ -1.15
CCT4-201ENST00000394440 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
CCT4-201ENST00000394440 PSPHP1O15172 72 aa7.85□□□□□ -1.15
CCT4-201ENST00000394440 LRP2P98164 4655 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms