RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 P0C880 135 aa3.04□□□□□ -1.92
GAPVD1-206ENST00000394104 KRTAP3-3Q9BYR6 98 aa3.04□□□□□ -1.92
GAPVD1-206ENST00000394104 KRTAP3-2Q9BYR7 98 aa3.04□□□□□ -1.92
GAPVD1-206ENST00000394104 MAST4O15021 2626 aa3.04□□□□□ -1.92
GAPVD1-206ENST00000394104 BSNQ9UPA5 3926 aa3.04□□□□□ -1.92
GAPVD1-206ENST00000394104 ATRQ13535 2644 aa3.03□□□□□ -1.92
GAPVD1-206ENST00000394104 H0YAA0 97 aa3.02□□□□□ -1.93
GAPVD1-206ENST00000394104 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
GAPVD1-206ENST00000394104 BAHCC1Q9P281 2608 aa3.02□□□□□ -1.93
GAPVD1-206ENST00000394104 TRANK1O15050 2925 aa3.02□□□□□ -1.93
GAPVD1-206ENST00000394104 FLNAP21333 2647 aaKnown RBP3.01□□□□□ -1.93
GAPVD1-206ENST00000394104 CENPEQ02224 2701 aa3.01□□□□□ -1.93
GAPVD1-206ENST00000394104 ITPR3Q14573 2671 aa3.01□□□□□ -1.93
GAPVD1-206ENST00000394104 DMBT1Q9UGM3 2413 aaPredicted RBP3.01□□□□□ -1.93
GAPVD1-206ENST00000394104 XP32Q5T750 250 aa3.01□□□□□ -1.93
GAPVD1-206ENST00000394104 DMXL1Q9Y485 3027 aa3□□□□□ -1.93
GAPVD1-206ENST00000394104 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
GAPVD1-206ENST00000394104 MGAM2Q2M2H8 2515 aa2.99□□□□□ -1.93
GAPVD1-206ENST00000394104 TNRC18O15417 2968 aaPredicted RBP2.99□□□□□ -1.93
GAPVD1-206ENST00000394104 CFAP46Q8IYW2 2715 aa2.97□□□□□ -1.93
GAPVD1-206ENST00000394104 ATMQ13315 3056 aa2.97□□□□□ -1.93
GAPVD1-206ENST00000394104 GCN1Q92616 2671 aaKnown RBP2.96□□□□□ -1.94
GAPVD1-206ENST00000394104 NBPF19A0A087WUL8 3843 aa2.95□□□□□ -1.94
GAPVD1-206ENST00000394104 SETXQ7Z333 2677 aaKnown RBP2.94□□□□□ -1.94
GAPVD1-206ENST00000394104 AKAP9Q99996 3911 aa2.94□□□□□ -1.94
GAPVD1-206ENST00000394104 CUBNO60494 3623 aa2.93□□□□□ -1.94
GAPVD1-206ENST00000394104 DMXL2Q8TDJ6 3036 aa2.93□□□□□ -1.94
GAPVD1-206ENST00000394104 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
GAPVD1-206ENST00000394104 MGAQ8IWI9 3026 aa2.9□□□□□ -1.95
GAPVD1-206ENST00000394104 TPRXLQ17RH7 258 aa2.9□□□□□ -1.95
GAPVD1-206ENST00000394104 NBEAL1Q6ZS30 2694 aa2.9□□□□□ -1.95
GAPVD1-206ENST00000394104 KALRNO60229 2985 aa2.9□□□□□ -1.95
GAPVD1-206ENST00000394104 COL12A1Q99715 3063 aa2.88□□□□□ -1.95
GAPVD1-206ENST00000394104 DSPP15924 2871 aaKnown RBP2.88□□□□□ -1.95
GAPVD1-206ENST00000394104 IGSF10Q6WRI0 2623 aa2.88□□□□□ -1.95
GAPVD1-206ENST00000394104 FLNCQ14315 2725 aa2.88□□□□□ -1.95
GAPVD1-206ENST00000394104 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
GAPVD1-206ENST00000394104 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
GAPVD1-206ENST00000394104 NBEAQ8NFP9 2946 aa2.87□□□□□ -1.95
GAPVD1-206ENST00000394104 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
GAPVD1-206ENST00000394104 COL6A5A8TX70 2615 aa2.85□□□□□ -1.95
GAPVD1-206ENST00000394104 KMT2BQ9UMN6 2715 aaPredicted RBP2.84□□□□□ -1.95
GAPVD1-206ENST00000394104 ADGRG4Q8IZF6 3080 aa2.83□□□□□ -1.96
GAPVD1-206ENST00000394104 MAP1AP78559 2803 aaPredicted RBP2.83□□□□□ -1.96
GAPVD1-206ENST00000394104 STAB2Q8WWQ8 2551 aa2.83□□□□□ -1.96
GAPVD1-206ENST00000394104 TEP1Q99973 2627 aaKnown RBP2.83□□□□□ -1.96
GAPVD1-206ENST00000394104 NOTCH1P46531 2555 aa2.83□□□□□ -1.96
GAPVD1-206ENST00000394104 CELSR1Q9NYQ6 3014 aa2.83□□□□□ -1.96
GAPVD1-206ENST00000394104 TEX15Q9BXT5 2789 aa2.82□□□□□ -1.96
GAPVD1-206ENST00000394104 NSD1Q96L73 2696 aaPredicted RBP2.82□□□□□ -1.96
GAPVD1-206ENST00000394104 ITPR1Q14643 2758 aa2.81□□□□□ -1.96
GAPVD1-206ENST00000394104 ASH1LQ9NR48 2969 aaKnown RBP2.81□□□□□ -1.96
GAPVD1-206ENST00000394104 UBR5O95071 2799 aaPredicted RBP2.81□□□□□ -1.96
GAPVD1-206ENST00000394104 KRTAP15-1Q3LI76 137 aa2.81□□□□□ -1.96
GAPVD1-206ENST00000394104 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
GAPVD1-206ENST00000394104 NIPBLQ6KC79 2804 aaeCLIP2.8□□□□□ -1.965e-8■□□□□ 8.6
GAPVD1-206ENST00000394104 DCHS2Q6V1P9 2916 aa2.79□□□□□ -1.96
GAPVD1-206ENST00000394104 NBEAL2Q6ZNJ1 2754 aa2.78□□□□□ -1.96
GAPVD1-206ENST00000394104 ITPR2Q14571 2701 aa2.77□□□□□ -1.97
GAPVD1-206ENST00000394104 KRTAP12-1P59990 96 aa2.76□□□□□ -1.97
GAPVD1-206ENST00000394104 CRYBG3Q68DQ2 2970 aa2.76□□□□□ -1.97
GAPVD1-206ENST00000394104 APCP25054 2843 aa2.75□□□□□ -1.97
GAPVD1-206ENST00000394104 ZNF469Q96JG9 3925 aaPredicted RBP2.75□□□□□ -1.97
GAPVD1-206ENST00000394104 TACC2O95359 2948 aa2.75□□□□□ -1.97
GAPVD1-206ENST00000394104 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
GAPVD1-206ENST00000394104 ZZEF1O43149 2961 aa2.71□□□□□ -1.98
GAPVD1-206ENST00000394104 LRBAP50851 2863 aa2.71□□□□□ -1.98
GAPVD1-206ENST00000394104 HIVEP1P15822 2718 aa2.69□□□□□ -1.98
GAPVD1-206ENST00000394104 UTP20O75691 2785 aaKnown RBP2.68□□□□□ -1.98
GAPVD1-206ENST00000394104 CSMD3Q7Z407 3707 aa2.67□□□□□ -1.98
GAPVD1-206ENST00000394104 ZANQ9Y493 2812 aa2.67□□□□□ -1.98
GAPVD1-206ENST00000394104 TENM3Q9P273 2699 aa2.67□□□□□ -1.98
GAPVD1-206ENST00000394104 KRTAP17-1Q9BYP8 105 aa2.67□□□□□ -1.98
GAPVD1-206ENST00000394104 LCE2BO14633 110 aa2.66□□□□□ -1.98
GAPVD1-206ENST00000394104 CELSR2Q9HCU4 2923 aa2.65□□□□□ -1.98
GAPVD1-206ENST00000394104 KRTAP3-1Q9BYR8 98 aa2.65□□□□□ -1.99
GAPVD1-206ENST00000394104 TENM4Q6N022 2769 aa2.65□□□□□ -1.99
GAPVD1-206ENST00000394104 INE1O15225 51 aa2.64□□□□□ -1.99
GAPVD1-206ENST00000394104 HRNRQ86YZ3 2850 aaPredicted RBP2.6□□□□□ -1.99
GAPVD1-206ENST00000394104 ANK2Q01484 3957 aa2.59□□□□□ -1.99
GAPVD1-206ENST00000394104 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
GAPVD1-206ENST00000394104 NF1P21359 2839 aa2.58□□□□□ -2
GAPVD1-206ENST00000394104 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
GAPVD1-206ENST00000394104 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
GAPVD1-206ENST00000394104 TGP01266 2768 aa2.54□□□□□ -2
GAPVD1-206ENST00000394104 MXRA5Q9NR99 2828 aa2.54□□□□□ -2
GAPVD1-206ENST00000394104 LYSTQ99698 3801 aa2.53□□□□□ -2
GAPVD1-206ENST00000394104 FBN2P35556 2912 aa2.51□□□□□ -2.01
GAPVD1-206ENST00000394104 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
GAPVD1-206ENST00000394104 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
GAPVD1-206ENST00000394104 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
GAPVD1-206ENST00000394104 TENM1Q9UKZ4 2725 aa2.5□□□□□ -2.01
GAPVD1-206ENST00000394104 LCE2CQ5TA81 110 aa2.48□□□□□ -2.01
GAPVD1-206ENST00000394104 ANK3Q12955 4377 aaKnown RBP2.46□□□□□ -2.02
GAPVD1-206ENST00000394104 TENM2Q9NT68 2774 aa2.46□□□□□ -2.02
GAPVD1-206ENST00000394104 VWFP04275 2813 aa2.45□□□□□ -2.02
GAPVD1-206ENST00000394104 PDZD2O15018 2839 aa2.44□□□□□ -2.02
GAPVD1-206ENST00000394104 CMYA5Q8N3K9 4069 aa2.44□□□□□ -2.02
GAPVD1-206ENST00000394104 OTOGQ6ZRI0 2925 aa2.43□□□□□ -2.02
GAPVD1-206ENST00000394104 MT1HL1P0DM35 61 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms