RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LEAP2Q969E1 77 aa2.83□□□□□ -1.96
TRAV35-201ENST00000390462 LRP1Q07954 4544 aaKnown RBP2.82□□□□□ -1.96
TRAV35-201ENST00000390462 TRGV1A0A0A0MS02 117 aa2.82□□□□□ -1.96
TRAV35-201ENST00000390462 H3BUT2 72 aa2.82□□□□□ -1.96
TRAV35-201ENST00000390462 FXYD6P3P58550 94 aa2.82□□□□□ -1.96
TRAV35-201ENST00000390462 HEPN1Q6WQI6 88 aa2.82□□□□□ -1.96
TRAV35-201ENST00000390462 KRTAP10-10P60014 251 aa2.81□□□□□ -1.96
TRAV35-201ENST00000390462 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
TRAV35-201ENST00000390462 TRAV1-2A0A0B4J238 106 aa2.8□□□□□ -1.96
TRAV35-201ENST00000390462 TRBV30A0A0K0K1B3 111 aa2.8□□□□□ -1.96
TRAV35-201ENST00000390462 PDCD5O14737 125 aa2.8□□□□□ -1.96
TRAV35-201ENST00000390462 ZCCHC13Q8WW36 166 aaKnown RBP2.8□□□□□ -1.96
TRAV35-201ENST00000390462 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
TRAV35-201ENST00000390462 PSENENQ9NZ42 101 aa2.8□□□□□ -1.96
TRAV35-201ENST00000390462 DEFB4AO15263 64 aa2.79□□□□□ -1.96
TRAV35-201ENST00000390462 ACYP2P14621 99 aa2.79□□□□□ -1.96
TRAV35-201ENST00000390462 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
TRAV35-201ENST00000390462 C7orf77A4D0Y5 90 aa2.78□□□□□ -1.96
TRAV35-201ENST00000390462 M0R3E3 92 aa2.78□□□□□ -1.96
TRAV35-201ENST00000390462 NCR3O14931 201 aa2.78□□□□□ -1.96
TRAV35-201ENST00000390462 CFDP00746 253 aaPredicted RBP2.78□□□□□ -1.96
TRAV35-201ENST00000390462 HMGN3Q15651 99 aa2.78□□□□□ -1.96
TRAV35-201ENST00000390462 DEFB114Q30KQ6 69 aa2.78□□□□□ -1.96
TRAV35-201ENST00000390462 FAM103A1Q9BTL3 118 aaKnown RBP2.78□□□□□ -1.96
TRAV35-201ENST00000390462 PKHD1L1Q86WI1 4243 aa2.78□□□□□ -1.96
TRAV35-201ENST00000390462 MGPP08493 103 aa2.77□□□□□ -1.97
TRAV35-201ENST00000390462 ARMS2P0C7Q2 107 aa2.77□□□□□ -1.97
TRAV35-201ENST00000390462 ZNF137PP52743 207 aa2.77□□□□□ -1.97
TRAV35-201ENST00000390462 Q5BKY6 102 aa2.77□□□□□ -1.97
TRAV35-201ENST00000390462 UBE2DNLQ8IWF7 75 aa2.77□□□□□ -1.97
TRAV35-201ENST00000390462 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
TRAV35-201ENST00000390462 LINC00575Q6W349 94 aa2.76□□□□□ -1.97
TRAV35-201ENST00000390462 C18orf32Q8TCD1 76 aa2.76□□□□□ -1.97
TRAV35-201ENST00000390462 SMIM4Q8WVI0 70 aa2.76□□□□□ -1.97
TRAV35-201ENST00000390462 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
TRAV35-201ENST00000390462 NDUFA3O95167 84 aa2.75□□□□□ -1.97
TRAV35-201ENST00000390462 COX17Q14061 63 aa2.75□□□□□ -1.97
TRAV35-201ENST00000390462 LINC01590Q5TEZ4 76 aa2.75□□□□□ -1.97
TRAV35-201ENST00000390462 DEFB131BA0A096LNP1 70 aa2.74□□□□□ -1.97
TRAV35-201ENST00000390462 MYMXA0A1B0GTQ4 84 aa2.74□□□□□ -1.97
TRAV35-201ENST00000390462 HAMPP81172 84 aa2.74□□□□□ -1.97
TRAV35-201ENST00000390462 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
TRAV35-201ENST00000390462 H3BUA1 57 aa2.73□□□□□ -1.97
TRAV35-201ENST00000390462 LEPROTL1O95214 131 aa2.73□□□□□ -1.97
TRAV35-201ENST00000390462 KRTAP6-3Q3LI67 103 aa2.73□□□□□ -1.97
TRAV35-201ENST00000390462 TTTY10Q9BZA0 68 aa2.73□□□□□ -1.97
TRAV35-201ENST00000390462 TNXBP22105 4242 aa2.73□□□□□ -1.97
TRAV35-201ENST00000390462 A0A087WVE0 104 aa2.72□□□□□ -1.97
TRAV35-201ENST00000390462 PLGLAQ15195 96 aa2.72□□□□□ -1.97
TRAV35-201ENST00000390462 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
TRAV35-201ENST00000390462 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
TRAV35-201ENST00000390462 D6R8Y8 96 aa2.71□□□□□ -1.98
TRAV35-201ENST00000390462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.71□□□□□ -1.98
TRAV35-201ENST00000390462 MUSTN1Q8IVN3 82 aa2.71□□□□□ -1.98
TRAV35-201ENST00000390462 USMG5Q96IX5 58 aa2.71□□□□□ -1.98
TRAV35-201ENST00000390462 PRH1P02810 166 aa2.7□□□□□ -1.98
TRAV35-201ENST00000390462 APELAP0DMC3 54 aa2.7□□□□□ -1.98
TRAV35-201ENST00000390462 DEFB104AQ8WTQ1 72 aa2.69□□□□□ -1.98
TRAV35-201ENST00000390462 CMC2Q9NRP2 79 aa2.69□□□□□ -1.98
TRAV35-201ENST00000390462 LINC00846Q9NV44 126 aa2.69□□□□□ -1.98
TRAV35-201ENST00000390462 SPINK13Q1W4C9 94 aa2.68□□□□□ -1.98
TRAV35-201ENST00000390462 PIGYQ3MUY2 71 aa2.68□□□□□ -1.98
TRAV35-201ENST00000390462 RPL39P5Q59GN2 51 aa2.68□□□□□ -1.98
TRAV35-201ENST00000390462 SMIM11BQ8TCY0 68 aa2.68□□□□□ -1.98
TRAV35-201ENST00000390462 LINC00472Q9H8W2 130 aa2.68□□□□□ -1.98
TRAV35-201ENST00000390462 CEBPZOSA8MTT3 80 aa2.67□□□□□ -1.98
TRAV35-201ENST00000390462 LELP1Q5T871 98 aa2.67□□□□□ -1.98
TRAV35-201ENST00000390462 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
TRAV35-201ENST00000390462 GVQW2A0A096LPI5 108 aaPredicted RBP2.66□□□□□ -1.98
TRAV35-201ENST00000390462 HTN3P15516 51 aa2.66□□□□□ -1.98
TRAV35-201ENST00000390462 PLAC4Q8WY50 150 aa2.66□□□□□ -1.98
TRAV35-201ENST00000390462 SMIM13P0DJ93 91 aa2.65□□□□□ -1.99
TRAV35-201ENST00000390462 KRTAP10-4P60372 401 aaPredicted RBP2.65□□□□□ -1.99
TRAV35-201ENST00000390462 LPAP08519 4548 aa2.64□□□□□ -1.99
TRAV35-201ENST00000390462 SPART-AS1P0CW21 52 aa2.64□□□□□ -1.99
TRAV35-201ENST00000390462 MT1HL1P0DM35 61 aa2.64□□□□□ -1.99
TRAV35-201ENST00000390462 Q6ZRX8 168 aa2.64□□□□□ -1.99
TRAV35-201ENST00000390462 DEFB131AP59861 70 aa2.63□□□□□ -1.99
TRAV35-201ENST00000390462 DEFB107AQ8IZN7 70 aa2.63□□□□□ -1.99
TRAV35-201ENST00000390462 TMEM263Q8WUH6 116 aaKnown RBP2.63□□□□□ -1.99
TRAV35-201ENST00000390462 PLAC8Q9NZF1 115 aa2.63□□□□□ -1.99
TRAV35-201ENST00000390462 UBE2D4Q9Y2X8 147 aa2.63□□□□□ -1.99
TRAV35-201ENST00000390462 RPL37P61927 97 aaKnown RBP2.62□□□□□ -1.99
TRAV35-201ENST00000390462 GCHFRP30047 84 aa2.61□□□□□ -1.99
TRAV35-201ENST00000390462 C6orf201Q7Z4U5 140 aa2.61□□□□□ -1.99
TRAV35-201ENST00000390462 RHPN1-AS1Q9BWJ2 59 aa2.61□□□□□ -1.99
TRAV35-201ENST00000390462 H0Y9P7 68 aa2.6□□□□□ -1.99
TRAV35-201ENST00000390462 NDUFA4O00483 81 aa2.6□□□□□ -1.99
TRAV35-201ENST00000390462 KLK9Q2XQG4 91 aa2.6□□□□□ -1.99
TRAV35-201ENST00000390462 Q6JHZ5 121 aa2.6□□□□□ -1.99
TRAV35-201ENST00000390462 UMAD1C9J7I0 102 aa2.59□□□□□ -1.99
TRAV35-201ENST00000390462 C10orf113Q5VZT2 155 aa2.59□□□□□ -1.99
TRAV35-201ENST00000390462 Q6ZSA8 131 aa2.59□□□□□ -1.99
TRAV35-201ENST00000390462 SPATA8Q6RVD6 105 aa2.58□□□□□ -2
TRAV35-201ENST00000390462 KRTAP13-1Q8IUC0 172 aa2.58□□□□□ -2
TRAV35-201ENST00000390462 ABRACLQ9P1F3 81 aa2.58□□□□□ -2
TRAV35-201ENST00000390462 SPINK7P58062 85 aa2.57□□□□□ -2
TRAV35-201ENST00000390462 DEFB130BP0DP73 79 aa2.56□□□□□ -2
TRAV35-201ENST00000390462 DEFB130AP0DP74 79 aa2.56□□□□□ -2
TRAV35-201ENST00000390462 SNRPGP62308 76 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms