RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 H3BQ85 93 aa7.27□□□□□ -1.25
CLCN6-204ENST00000376491 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
CLCN6-204ENST00000376491 C8orf87E5RJ46 101 aa7.26□□□□□ -1.25
CLCN6-204ENST00000376491 S100A1P23297 94 aa7.26□□□□□ -1.25
CLCN6-204ENST00000376491 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
CLCN6-204ENST00000376491 K7ERJ3 54 aa7.25□□□□□ -1.25
CLCN6-204ENST00000376491 ZCCHC13Q8WW36 166 aaKnown RBP7.25□□□□□ -1.25
CLCN6-204ENST00000376491 PSMB2P49721 201 aa7.24□□□□□ -1.25
CLCN6-204ENST00000376491 UBE2V1Q13404 147 aa7.24□□□□□ -1.25
CLCN6-204ENST00000376491 SPINK7P58062 85 aa7.23□□□□□ -1.25
CLCN6-204ENST00000376491 MTURNQ8N3F0 131 aa7.23□□□□□ -1.25
CLCN6-204ENST00000376491 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
CLCN6-204ENST00000376491 VPS25Q9BRG1 176 aa7.22□□□□□ -1.25
CLCN6-204ENST00000376491 COX6CP09669 75 aa7.2□□□□□ -1.26
CLCN6-204ENST00000376491 HSD52Q0P140 79 aa7.19□□□□□ -1.26
CLCN6-204ENST00000376491 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
CLCN6-204ENST00000376491 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
CLCN6-204ENST00000376491 A8MWP4 228 aa7.15□□□□□ -1.26
CLCN6-204ENST00000376491 J3KT08 172 aa7.15□□□□□ -1.26
CLCN6-204ENST00000376491 DSCR8Q96T75 97 aa7.15□□□□□ -1.26
CLCN6-204ENST00000376491 LINC00846Q9NV44 126 aa7.15□□□□□ -1.26
CLCN6-204ENST00000376491 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
CLCN6-204ENST00000376491 Q6ZQT0 140 aa7.13□□□□□ -1.27
CLCN6-204ENST00000376491 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
CLCN6-204ENST00000376491 C9JAW5 83 aa7.1□□□□□ -1.27
CLCN6-204ENST00000376491 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
CLCN6-204ENST00000376491 NDUFB1O75438 58 aa7.09□□□□□ -1.27
CLCN6-204ENST00000376491 BAALC-AS2P0C853 105 aa7.09□□□□□ -1.27
CLCN6-204ENST00000376491 SCGB1C2P0DMR2 95 aa7.09□□□□□ -1.27
CLCN6-204ENST00000376491 IGKV3D-7A0A0C4DH55 119 aa7.07□□□□□ -1.28
CLCN6-204ENST00000376491 LYRM7Q5U5X0 104 aa7.06□□□□□ -1.28
CLCN6-204ENST00000376491 UQCR10Q9UDW1 63 aa7.04□□□□□ -1.28
CLCN6-204ENST00000376491 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
CLCN6-204ENST00000376491 Q6ZVQ6 151 aa7.03□□□□□ -1.28
CLCN6-204ENST00000376491 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
CLCN6-204ENST00000376491 LOC110117498A0A087WWA1 95 aa6.99□□□□□ -1.29
CLCN6-204ENST00000376491 A0A1B0GW54 56 aa6.99□□□□□ -1.29
CLCN6-204ENST00000376491 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
CLCN6-204ENST00000376491 JMJD7-PLA2G4BH0Y9G9 81 aa6.98□□□□□ -1.29
CLCN6-204ENST00000376491 PCP4P48539 62 aa6.98□□□□□ -1.29
CLCN6-204ENST00000376491 MMP24-AS1A0A0U1RRL7 71 aa6.97□□□□□ -1.29
CLCN6-204ENST00000376491 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
CLCN6-204ENST00000376491 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
CLCN6-204ENST00000376491 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
CLCN6-204ENST00000376491 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
CLCN6-204ENST00000376491 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
CLCN6-204ENST00000376491 ATXN8Q156A1 80 aa6.94□□□□□ -1.3
CLCN6-204ENST00000376491 PDE6GP18545 87 aa6.93□□□□□ -1.3
CLCN6-204ENST00000376491 NREPQ16612 68 aa6.91□□□□□ -1.3
CLCN6-204ENST00000376491 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
CLCN6-204ENST00000376491 K7EQZ3 153 aa6.89□□□□□ -1.31
CLCN6-204ENST00000376491 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
CLCN6-204ENST00000376491 NDUFS5O43920 106 aa6.88□□□□□ -1.31
CLCN6-204ENST00000376491 IGKV2-30P06310 120 aa6.88□□□□□ -1.31
CLCN6-204ENST00000376491 Q5W150 140 aa6.88□□□□□ -1.31
CLCN6-204ENST00000376491 C7orf65Q6ZTY9 151 aa6.84□□□□□ -1.31
CLCN6-204ENST00000376491 NEBP20929 6669 aa6.83□□□□□ -1.32
CLCN6-204ENST00000376491 M0R143 59 aa6.82□□□□□ -1.32
CLCN6-204ENST00000376491 MT1BP07438 61 aa6.8□□□□□ -1.32
CLCN6-204ENST00000376491 C4orf26Q17RF5 130 aa6.8□□□□□ -1.32
CLCN6-204ENST00000376491 A6NN06 94 aa6.77□□□□□ -1.33
CLCN6-204ENST00000376491 BPY2O14599 106 aa6.77□□□□□ -1.33
CLCN6-204ENST00000376491 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
CLCN6-204ENST00000376491 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
CLCN6-204ENST00000376491 Q8N9L7 120 aa6.75□□□□□ -1.33
CLCN6-204ENST00000376491 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
CLCN6-204ENST00000376491 FAM236AA0A1B0GUQ0 79 aa6.73□□□□□ -1.33
CLCN6-204ENST00000376491 FAM236BA0A1B0GV22 79 aa6.73□□□□□ -1.33
CLCN6-204ENST00000376491 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
CLCN6-204ENST00000376491 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
CLCN6-204ENST00000376491 H3BT86 120 aa6.71□□□□□ -1.34
CLCN6-204ENST00000376491 Q5VV11 94 aa6.71□□□□□ -1.34
CLCN6-204ENST00000376491 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
CLCN6-204ENST00000376491 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
CLCN6-204ENST00000376491 CXCL6P80162 114 aa6.68□□□□□ -1.34
CLCN6-204ENST00000376491 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
CLCN6-204ENST00000376491 S4R3F8 94 aa6.67□□□□□ -1.34
CLCN6-204ENST00000376491 BATFQ16520 125 aa6.66□□□□□ -1.34
CLCN6-204ENST00000376491 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
CLCN6-204ENST00000376491 LCA10Q71F78 164 aa6.65□□□□□ -1.34
CLCN6-204ENST00000376491 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
CLCN6-204ENST00000376491 PCP4L1A6NKN8 68 aa6.64□□□□□ -1.35
CLCN6-204ENST00000376491 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
CLCN6-204ENST00000376491 TSTD3H0UI37 97 aa6.62□□□□□ -1.35
CLCN6-204ENST00000376491 A0A1W2PPM0 123 aa6.61□□□□□ -1.35
CLCN6-204ENST00000376491 TAX1BP3O14907 124 aa6.61□□□□□ -1.35
CLCN6-204ENST00000376491 KRTAP20-1Q3LI63 56 aa6.61□□□□□ -1.35
CLCN6-204ENST00000376491 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
CLCN6-204ENST00000376491 SMIM6P0DI80 62 aa6.59□□□□□ -1.35
CLCN6-204ENST00000376491 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
CLCN6-204ENST00000376491 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
CLCN6-204ENST00000376491 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
CLCN6-204ENST00000376491 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
CLCN6-204ENST00000376491 SPCS1Q9Y6A9 102 aa6.5□□□□□ -1.37
CLCN6-204ENST00000376491 KMT2DO14686 5537 aa6.5□□□□□ -1.37
CLCN6-204ENST00000376491 A0A087WVE0 104 aa6.48□□□□□ -1.37
CLCN6-204ENST00000376491 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
CLCN6-204ENST00000376491 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
CLCN6-204ENST00000376491 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
CLCN6-204ENST00000376491 PRO0461Q9UI25 63 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms