RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
NELFE-202ENST00000375429 A0A1B0GVX0 72 aa11.32□□□□□ -0.6
NELFE-202ENST00000375429 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
NELFE-202ENST00000375429 NDUFB1O75438 58 aa11.3□□□□□ -0.6
NELFE-202ENST00000375429 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
NELFE-202ENST00000375429 CDIP1Q9H305 208 aa11.29□□□□□ -0.6
NELFE-202ENST00000375429 PRR15Q8IV56 129 aa11.28□□□□□ -0.6
NELFE-202ENST00000375429 K7EQZ3 153 aa11.27□□□□□ -0.61
NELFE-202ENST00000375429 LINC00313P59037 77 aa11.26□□□□□ -0.61
NELFE-202ENST00000375429 LRP2P98164 4655 aa11.26□□□□□ -0.61
NELFE-202ENST00000375429 Q8N9L7 120 aa11.25□□□□□ -0.61
NELFE-202ENST00000375429 XP32Q5T750 250 aa11.24□□□□□ -0.61
NELFE-202ENST00000375429 CXCL6P80162 114 aa11.24□□□□□ -0.61
NELFE-202ENST00000375429 C8orf87E5RJ46 101 aa11.22□□□□□ -0.61
NELFE-202ENST00000375429 LINC00643Q86TS7 51 aa11.21□□□□□ -0.61
NELFE-202ENST00000375429 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.61
NELFE-202ENST00000375429 KRTAP16-1A8MUX0 517 aa11.19□□□□□ -0.62
NELFE-202ENST00000375429 ATP5EP2Q5VTU8 51 aa11.19□□□□□ -0.62
NELFE-202ENST00000375429 MMP24-AS1A0A0U1RRL7 71 aa11.16□□□□□ -0.62
NELFE-202ENST00000375429 C20orf166-AS1Q96NR2 134 aa11.11□□□□□ -0.63
NELFE-202ENST00000375429 RPL37P61927 97 aaKnown RBP11.1□□□□□ -0.63
NELFE-202ENST00000375429 A8MUU9 505 aa11.09□□□□□ -0.63
NELFE-202ENST00000375429 Q75L30 129 aa11.09□□□□□ -0.63
NELFE-202ENST00000375429 hDV103S1A0JD37 113 aa11.08□□□□□ -0.64
NELFE-202ENST00000375429 WFDC13Q8IUB5 93 aa11.07□□□□□ -0.64
NELFE-202ENST00000375429 HIST1H4AP62805 103 aaKnown RBP11.06□□□□□ -0.64
NELFE-202ENST00000375429 TMEM254Q8TBM7 123 aa11.06□□□□□ -0.64
NELFE-202ENST00000375429 HCG22E2RYF7 251 aa11.05□□□□□ -0.64
NELFE-202ENST00000375429 CASC2Q6XLA1 102 aa11.05□□□□□ -0.64
NELFE-202ENST00000375429 MRPL34Q9BQ48 92 aaKnown RBP11.05□□□□□ -0.64
NELFE-202ENST00000375429 MUC17Q685J3 4493 aa11.05□□□□□ -0.64
NELFE-202ENST00000375429 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
NELFE-202ENST00000375429 SEC61BP60468 96 aaKnown RBP11.01□□□□□ -0.65
NELFE-202ENST00000375429 UBR4Q5T4S7 5183 aa11□□□□□ -0.65
NELFE-202ENST00000375429 A0A087WVE0 104 aa10.99□□□□□ -0.65
NELFE-202ENST00000375429 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
NELFE-202ENST00000375429 PCOTHQ58A44 107 aa10.99□□□□□ -0.65
NELFE-202ENST00000375429 IMUPQ9GZP8 106 aa10.97□□□□□ -0.65
NELFE-202ENST00000375429 ATP11AUNQ6ZP68 121 aa10.96□□□□□ -0.65
NELFE-202ENST00000375429 NDUFS5O43920 106 aa10.94□□□□□ -0.66
NELFE-202ENST00000375429 ZCCHC13Q8WW36 166 aaKnown RBP10.88□□□□□ -0.67
NELFE-202ENST00000375429 KRTAP4-1Q9BYQ7 146 aa10.87□□□□□ -0.67
NELFE-202ENST00000375429 RNF213Q63HN8 5207 aa10.85□□□□□ -0.67
NELFE-202ENST00000375429 Q5W150 140 aa10.82□□□□□ -0.68
NELFE-202ENST00000375429 TP53AIP1Q9HCN2 124 aa10.79□□□□□ -0.68
NELFE-202ENST00000375429 MUC2Q02817 5179 aa10.76□□□□□ -0.69
NELFE-202ENST00000375429 SCGB1A1P11684 91 aa10.72□□□□□ -0.69
NELFE-202ENST00000375429 FAM236AA0A1B0GUQ0 79 aa10.71□□□□□ -0.69
NELFE-202ENST00000375429 FAM236BA0A1B0GV22 79 aa10.71□□□□□ -0.69
NELFE-202ENST00000375429 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
NELFE-202ENST00000375429 UQCRQO14949 82 aa10.68□□□□□ -0.7
NELFE-202ENST00000375429 SPINK7P58062 85 aa10.68□□□□□ -0.7
NELFE-202ENST00000375429 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
NELFE-202ENST00000375429 SMIM20Q8N5G0 67 aa10.62□□□□□ -0.71
NELFE-202ENST00000375429 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
NELFE-202ENST00000375429 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
NELFE-202ENST00000375429 ATOX1O00244 68 aa10.6□□□□□ -0.71
NELFE-202ENST00000375429 H0Y9P7 68 aa10.58□□□□□ -0.72
NELFE-202ENST00000375429 HRES1P13985 223 aa10.57□□□□□ -0.72
NELFE-202ENST00000375429 C7orf65Q6ZTY9 151 aa10.57□□□□□ -0.72
NELFE-202ENST00000375429 C5orf47Q569G3 176 aa10.54□□□□□ -0.72
NELFE-202ENST00000375429 TRAV7A0A075B6U4 112 aa10.52□□□□□ -0.72
NELFE-202ENST00000375429 KRTAP19-2Q3LHN2 52 aa10.52□□□□□ -0.73
NELFE-202ENST00000375429 PCP4P48539 62 aa10.5□□□□□ -0.73
NELFE-202ENST00000375429 MP68P56378 58 aa10.5□□□□□ -0.73
NELFE-202ENST00000375429 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
NELFE-202ENST00000375429 LOC101927531A0A1B0GV80 90 aa10.49□□□□□ -0.73
NELFE-202ENST00000375429 LINC00208Q96KT6 92 aa10.49□□□□□ -0.73
NELFE-202ENST00000375429 CYP4F30PQ9H0H9 118 aa10.49□□□□□ -0.73
NELFE-202ENST00000375429 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
NELFE-202ENST00000375429 C1orf64Q8NEQ6 169 aa10.48□□□□□ -0.73
NELFE-202ENST00000375429 H3BPC8 53 aa10.44□□□□□ -0.74
NELFE-202ENST00000375429 SERP2Q8N6R1 65 aa10.44□□□□□ -0.74
NELFE-202ENST00000375429 LCE2CQ5TA81 110 aa10.43□□□□□ -0.74
NELFE-202ENST00000375429 RBM12B-AS1Q9P1G2 102 aa10.43□□□□□ -0.74
NELFE-202ENST00000375429 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
NELFE-202ENST00000375429 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
NELFE-202ENST00000375429 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
NELFE-202ENST00000375429 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
NELFE-202ENST00000375429 FAM236DA0A1B0GTK5 79 aa10.36□□□□□ -0.75
NELFE-202ENST00000375429 FAM236CP0DP71 79 aa10.36□□□□□ -0.75
NELFE-202ENST00000375429 KLKP1Q107X0 134 aa10.35□□□□□ -0.75
NELFE-202ENST00000375429 ANAPC13Q9BS18 74 aa10.34□□□□□ -0.75
NELFE-202ENST00000375429 COX7CP15954 63 aa10.32□□□□□ -0.76
NELFE-202ENST00000375429 C20orf197Q8N268 126 aa10.28□□□□□ -0.76
NELFE-202ENST00000375429 SNURFQ9Y675 71 aa10.28□□□□□ -0.76
NELFE-202ENST00000375429 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
NELFE-202ENST00000375429 MT1HP80294 61 aa10.25□□□□□ -0.77
NELFE-202ENST00000375429 FLGP20930 4061 aaPredicted RBP10.24□□□□□ -0.77
NELFE-202ENST00000375429 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.78
NELFE-202ENST00000375429 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.78
NELFE-202ENST00000375429 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
NELFE-202ENST00000375429 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
NELFE-202ENST00000375429 NDUFC1O43677 76 aa10.09□□□□□ -0.79
NELFE-202ENST00000375429 M0R2T5 61 aa10.09□□□□□ -0.79
NELFE-202ENST00000375429 CCDC179H3BU77 68 aa10.08□□□□□ -0.8
NELFE-202ENST00000375429 CYSTM1Q9H1C7 97 aa10.08□□□□□ -0.8
NELFE-202ENST00000375429 A8MUN3 132 aa10.06□□□□□ -0.8
NELFE-202ENST00000375429 DMAC1Q96GE9 116 aa10.03□□□□□ -0.8
NELFE-202ENST00000375429 SPANXA2-OT1Q8N9U9 137 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms