RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 STARD9Q9P2P6 4700 aa5.05□□□□□ -1.6
UBR4-202ENST00000375224 H0Y9P7 68 aa5.04□□□□□ -1.6
UBR4-202ENST00000375224 H3BPC8 53 aa5.04□□□□□ -1.6
UBR4-202ENST00000375224 DEFB116Q30KQ4 102 aa5.03□□□□□ -1.6
UBR4-202ENST00000375224 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
UBR4-202ENST00000375224 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
UBR4-202ENST00000375224 RPL37AP61513 92 aaKnown RBP5.02□□□□□ -1.61
UBR4-202ENST00000375224 K7EQZ3 153 aa5.02□□□□□ -1.61
UBR4-202ENST00000375224 A0A087WSZ3 146 aa5.02□□□□□ -1.61
UBR4-202ENST00000375224 PSORS1C2Q9UIG4 136 aa5.01□□□□□ -1.61
UBR4-202ENST00000375224 LINC00483Q53H64 154 aa5□□□□□ -1.61
UBR4-202ENST00000375224 DSCR10P59022 87 aa5□□□□□ -1.61
UBR4-202ENST00000375224 ZNF861PO60384 105 aa5□□□□□ -1.61
UBR4-202ENST00000375224 CSAG1Q6PB30 78 aa5□□□□□ -1.61
UBR4-202ENST00000375224 IGHV6-1A0A0B4J1U7 121 aa4.99□□□□□ -1.61
UBR4-202ENST00000375224 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
UBR4-202ENST00000375224 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
UBR4-202ENST00000375224 FBN3Q75N90 2809 aa4.98□□□□□ -1.61
UBR4-202ENST00000375224 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
UBR4-202ENST00000375224 IGLV9-49A0A0B4J1Y8 123 aa4.96□□□□□ -1.62
UBR4-202ENST00000375224 HECTD4Q9Y4D8 3996 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 IGLV7-46A0A075B6I9 117 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 PCOTHQ58A44 107 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 DNAH2Q9P225 4427 aa4.95□□□□□ -1.62
UBR4-202ENST00000375224 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
UBR4-202ENST00000375224 A0A087X002 238 aa4.94□□□□□ -1.62
UBR4-202ENST00000375224 A8MWP4 228 aa4.93□□□□□ -1.62
UBR4-202ENST00000375224 KRTAP10-2P60368 255 aa4.93□□□□□ -1.62
UBR4-202ENST00000375224 CIRBP-AS1Q8TBR5 109 aa4.92□□□□□ -1.62
UBR4-202ENST00000375224 Q6ZSA8 131 aa4.91□□□□□ -1.62
UBR4-202ENST00000375224 ROMO1P60602 79 aa4.89□□□□□ -1.63
UBR4-202ENST00000375224 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
UBR4-202ENST00000375224 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
UBR4-202ENST00000375224 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
UBR4-202ENST00000375224 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
UBR4-202ENST00000375224 CDK2AP2O75956 126 aa4.88□□□□□ -1.63
UBR4-202ENST00000375224 ANAPC11Q9NYG5 84 aa4.88□□□□□ -1.63
UBR4-202ENST00000375224 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
UBR4-202ENST00000375224 Q96NJ1 140 aa4.87□□□□□ -1.63
UBR4-202ENST00000375224 A0A1B0GU69 56 aa4.87□□□□□ -1.63
UBR4-202ENST00000375224 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
UBR4-202ENST00000375224 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
UBR4-202ENST00000375224 FRAS1Q86XX4 4008 aa4.84□□□□□ -1.63
UBR4-202ENST00000375224 UQCR11O14957 56 aa4.84□□□□□ -1.63
UBR4-202ENST00000375224 HRES1P13985 223 aa4.84□□□□□ -1.63
UBR4-202ENST00000375224 A0A1B0GVX0 72 aa4.84□□□□□ -1.64
UBR4-202ENST00000375224 C8orf17Q9NRJ1 99 aa4.83□□□□□ -1.64
UBR4-202ENST00000375224 TP53AIP1Q9HCN2 124 aa4.83□□□□□ -1.64
UBR4-202ENST00000375224 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
UBR4-202ENST00000375224 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
UBR4-202ENST00000375224 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
UBR4-202ENST00000375224 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
UBR4-202ENST00000375224 PKD1P98161 4303 aa4.78□□□□□ -1.64
UBR4-202ENST00000375224 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
UBR4-202ENST00000375224 ACYP2P14621 99 aa4.78□□□□□ -1.64
UBR4-202ENST00000375224 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
UBR4-202ENST00000375224 KRTAP13-2Q52LG2 175 aa4.77□□□□□ -1.65
UBR4-202ENST00000375224 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
UBR4-202ENST00000375224 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
UBR4-202ENST00000375224 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
UBR4-202ENST00000375224 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
UBR4-202ENST00000375224 TYMSOSQ8TAI1 123 aa4.74□□□□□ -1.65
UBR4-202ENST00000375224 A0A1B0GVY2 172 aa4.73□□□□□ -1.65
UBR4-202ENST00000375224 SPINK1P00995 79 aa4.73□□□□□ -1.65
UBR4-202ENST00000375224 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
UBR4-202ENST00000375224 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
UBR4-202ENST00000375224 LRP1BQ9NZR2 4599 aa4.71□□□□□ -1.66
UBR4-202ENST00000375224 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
UBR4-202ENST00000375224 SACSQ9NZJ4 4579 aa4.7□□□□□ -1.66
UBR4-202ENST00000375224 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
UBR4-202ENST00000375224 LINC00304Q8N9R0 145 aa4.67□□□□□ -1.66
UBR4-202ENST00000375224 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
UBR4-202ENST00000375224 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
UBR4-202ENST00000375224 P0C880 135 aa4.67□□□□□ -1.66
UBR4-202ENST00000375224 FAM229AH3BQW9 127 aa4.67□□□□□ -1.66
UBR4-202ENST00000375224 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
UBR4-202ENST00000375224 A8MUU9 505 aa4.65□□□□□ -1.66
UBR4-202ENST00000375224 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
UBR4-202ENST00000375224 K7ERS5 55 aa4.63□□□□□ -1.67
UBR4-202ENST00000375224 Q5W150 140 aa4.63□□□□□ -1.67
UBR4-202ENST00000375224 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
UBR4-202ENST00000375224 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
UBR4-202ENST00000375224 DYNC1H1Q14204 4646 aaKnown RBP4.62□□□□□ -1.67
UBR4-202ENST00000375224 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
UBR4-202ENST00000375224 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
UBR4-202ENST00000375224 RYR3Q15413 4870 aa4.61□□□□□ -1.67
UBR4-202ENST00000375224 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
UBR4-202ENST00000375224 CRIPTQ9P021 101 aa4.59□□□□□ -1.68
UBR4-202ENST00000375224 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
UBR4-202ENST00000375224 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
UBR4-202ENST00000375224 J3QL48 77 aa4.57□□□□□ -1.68
UBR4-202ENST00000375224 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
UBR4-202ENST00000375224 RYR2Q92736 4967 aa4.56□□□□□ -1.68
UBR4-202ENST00000375224 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
UBR4-202ENST00000375224 DMBT1Q9UGM3 2413 aaPredicted RBP4.54□□□□□ -1.68
UBR4-202ENST00000375224 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
UBR4-202ENST00000375224 Q5VSD8 79 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms