RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ST20-AS1Q8NBB2 130 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 KMT2AQ03164 3969 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 IGKV2-24A0A0C4DH68 120 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 A0A1W2PNN7 141 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 LRCOL1A6NCL2 159 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 C3orf84H3BNL1 204 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 BPY2O14599 106 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 KLKP1Q107X0 134 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 Q6ZRN7 208 aaPredicted RBP2.94□□□□□ -1.94
USP48-202ENST00000374730 C9orf163Q8N9P6 203 aa2.94□□□□□ -1.94
USP48-202ENST00000374730 RYR2Q92736 4967 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 F8WEM9 126 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 J3KT08 172 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 SPRR1BP22528 89 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
USP48-202ENST00000374730 C20orf197Q8N268 126 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 LINC00474Q9P2X8 69 aa2.93□□□□□ -1.94
USP48-202ENST00000374730 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.92□□□□□ -1.94
USP48-202ENST00000374730 NDUFC1O43677 76 aa2.92□□□□□ -1.94
USP48-202ENST00000374730 PRLHP81277 87 aa2.92□□□□□ -1.94
USP48-202ENST00000374730 IGFL1Q6UW32 110 aa2.92□□□□□ -1.94
USP48-202ENST00000374730 PHF5AQ7RTV0 110 aaKnown RBP2.92□□□□□ -1.94
USP48-202ENST00000374730 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
USP48-202ENST00000374730 SACSQ9NZJ4 4579 aa2.92□□□□□ -1.94
USP48-202ENST00000374730 H7BZZ5 65 aa2.91□□□□□ -1.94
USP48-202ENST00000374730 CHTF8P0CG12 524 aa2.91□□□□□ -1.94
USP48-202ENST00000374730 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
USP48-202ENST00000374730 Q8N9L7 120 aa2.91□□□□□ -1.94
USP48-202ENST00000374730 HIGD2AQ9BW72 106 aa2.91□□□□□ -1.94
USP48-202ENST00000374730 PKD1P98161 4303 aa2.9□□□□□ -1.94
USP48-202ENST00000374730 FAM236DA0A1B0GTK5 79 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 FAM236CP0DP71 79 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 UBE2AP49459 152 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 ATP5EP56381 51 aaPredicted RBP2.9□□□□□ -1.95
USP48-202ENST00000374730 KRTAP11-1Q8IUC1 163 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 SPACA4Q8TDM5 124 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 DPH3Q96FX2 82 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.95
USP48-202ENST00000374730 HERC2O95714 4834 aa2.9□□□□□ -1.95
USP48-202ENST00000374730 A0A087WTM6 91 aa2.89□□□□□ -1.95
USP48-202ENST00000374730 LCE6AA0A183 80 aa2.89□□□□□ -1.95
USP48-202ENST00000374730 CD164Q04900 197 aa2.89□□□□□ -1.95
USP48-202ENST00000374730 TMEM254Q8TBM7 123 aa2.89□□□□□ -1.95
USP48-202ENST00000374730 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
USP48-202ENST00000374730 A0A0U1RQV1 116 aa2.88□□□□□ -1.95
USP48-202ENST00000374730 PANO1I0J062 215 aa2.88□□□□□ -1.95
USP48-202ENST00000374730 K7EQZ3 153 aa2.88□□□□□ -1.95
USP48-202ENST00000374730 RPL37AP61513 92 aaKnown RBP2.88□□□□□ -1.95
USP48-202ENST00000374730 SNURFQ9Y675 71 aa2.88□□□□□ -1.95
USP48-202ENST00000374730 LRP1BQ9NZR2 4599 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 A0A087WSZ3 146 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 TYMSOSQ8TAI1 123 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
USP48-202ENST00000374730 DYNC1H1Q14204 4646 aaKnown RBP2.86□□□□□ -1.95
USP48-202ENST00000374730 RTL8CO15255 209 aa2.86□□□□□ -1.95
USP48-202ENST00000374730 LINC00472Q9H8W2 130 aa2.86□□□□□ -1.95
USP48-202ENST00000374730 PLAC8Q9NZF1 115 aa2.86□□□□□ -1.95
USP48-202ENST00000374730 ZNF706Q9Y5V0 76 aaPredicted RBP2.86□□□□□ -1.95
USP48-202ENST00000374730 A0A0G2JQZ4 141 aa2.85□□□□□ -1.95
USP48-202ENST00000374730 A8MWP4 228 aa2.85□□□□□ -1.95
USP48-202ENST00000374730 ZCCHC13Q8WW36 166 aaKnown RBP2.85□□□□□ -1.95
USP48-202ENST00000374730 PRR15Q8IV56 129 aa2.84□□□□□ -1.95
USP48-202ENST00000374730 VPS13BQ7Z7G8 4022 aa2.83□□□□□ -1.96
USP48-202ENST00000374730 ZNF861PO60384 105 aa2.83□□□□□ -1.96
USP48-202ENST00000374730 C1orf134Q5TEV5 83 aa2.83□□□□□ -1.96
USP48-202ENST00000374730 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
USP48-202ENST00000374730 APOBP04114 4563 aaKnown RBP2.82□□□□□ -1.96
USP48-202ENST00000374730 H3BPC8 53 aa2.82□□□□□ -1.96
USP48-202ENST00000374730 DEFB116Q30KQ4 102 aa2.82□□□□□ -1.96
USP48-202ENST00000374730 Q5XG85 94 aa2.82□□□□□ -1.96
USP48-202ENST00000374730 CASC2Q6XLA1 102 aa2.82□□□□□ -1.96
USP48-202ENST00000374730 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
USP48-202ENST00000374730 WFDC13Q8IUB5 93 aa2.82□□□□□ -1.96
USP48-202ENST00000374730 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 PSPHP1O15172 72 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 NDUFB1O75438 58 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 MP68P56378 58 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 MOBPQ13875 183 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 Q96NJ1 140 aa2.81□□□□□ -1.96
USP48-202ENST00000374730 IGLV7-43P04211 117 aa2.8□□□□□ -1.96
USP48-202ENST00000374730 ASB16-AS1Q495Z4 193 aa2.8□□□□□ -1.96
USP48-202ENST00000374730 CYP4F30PQ9H0H9 118 aa2.8□□□□□ -1.96
USP48-202ENST00000374730 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
USP48-202ENST00000374730 TRAV22A0A0B4J277 110 aa2.79□□□□□ -1.96
USP48-202ENST00000374730 hDV103S1A0JD37 113 aa2.79□□□□□ -1.96
USP48-202ENST00000374730 H0Y9P7 68 aa2.79□□□□□ -1.96
USP48-202ENST00000374730 FP248Q71RG6 208 aaPredicted RBP2.79□□□□□ -1.96
USP48-202ENST00000374730 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
USP48-202ENST00000374730 A0A1B0GVX0 72 aa2.78□□□□□ -1.96
USP48-202ENST00000374730 LY6G6CO95867 125 aa2.78□□□□□ -1.96
USP48-202ENST00000374730 Q6ZSA8 131 aa2.78□□□□□ -1.96
USP48-202ENST00000374730 SPANXA2-OT1Q8N9U9 137 aa2.78□□□□□ -1.96
USP48-202ENST00000374730 TP53AIP1Q9HCN2 124 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms