RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 GTF2H5Q6ZYL4 71 aa9.26□□□□□ -0.93
TRAPPC3-202ENST00000373162 DSCR8Q96T75 97 aa9.25□□□□□ -0.93
TRAPPC3-202ENST00000373162 DSCR10P59022 87 aa9.24□□□□□ -0.93
TRAPPC3-202ENST00000373162 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
TRAPPC3-202ENST00000373162 CCKP06307 115 aa9.21□□□□□ -0.94
TRAPPC3-202ENST00000373162 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC3-202ENST00000373162 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
TRAPPC3-202ENST00000373162 M0R2T5 61 aa9.19□□□□□ -0.94
TRAPPC3-202ENST00000373162 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
TRAPPC3-202ENST00000373162 SIGMAR1Q99720 223 aa9.19□□□□□ -0.94
TRAPPC3-202ENST00000373162 C14orf132Q9NPU4 83 aa9.19□□□□□ -0.94
TRAPPC3-202ENST00000373162 LOC110117498A0A087WWA1 95 aa9.18□□□□□ -0.94
TRAPPC3-202ENST00000373162 VPS25Q9BRG1 176 aa9.18□□□□□ -0.94
TRAPPC3-202ENST00000373162 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
TRAPPC3-202ENST00000373162 PDE6GP18545 87 aa9.17□□□□□ -0.94
TRAPPC3-202ENST00000373162 Q6ZQT0 140 aa9.17□□□□□ -0.94
TRAPPC3-202ENST00000373162 LINC00313P59037 77 aa9.15□□□□□ -0.94
TRAPPC3-202ENST00000373162 F8W1H4 67 aa9.14□□□□□ -0.95
TRAPPC3-202ENST00000373162 A0A1B0GV90 55 aa9.13□□□□□ -0.95
TRAPPC3-202ENST00000373162 DEFB116Q30KQ4 102 aa9.12□□□□□ -0.95
TRAPPC3-202ENST00000373162 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
TRAPPC3-202ENST00000373162 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
TRAPPC3-202ENST00000373162 KRTAP9-8Q9BYQ0 159 aa9.09□□□□□ -0.95
TRAPPC3-202ENST00000373162 A0A1B0GW54 56 aa9.08□□□□□ -0.96
TRAPPC3-202ENST00000373162 HRES1P13985 223 aa9.07□□□□□ -0.96
TRAPPC3-202ENST00000373162 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
TRAPPC3-202ENST00000373162 ETDBQ3ZM63 59 aa9.05□□□□□ -0.96
TRAPPC3-202ENST00000373162 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
TRAPPC3-202ENST00000373162 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
TRAPPC3-202ENST00000373162 J3KT08 172 aa8.97□□□□□ -0.97
TRAPPC3-202ENST00000373162 NREPQ16612 68 aa8.96□□□□□ -0.98
TRAPPC3-202ENST00000373162 Q8N9P0 234 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC3-202ENST00000373162 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
TRAPPC3-202ENST00000373162 MT2AP02795 61 aa8.93□□□□□ -0.98
TRAPPC3-202ENST00000373162 ZCCHC13Q8WW36 166 aaKnown RBP8.93□□□□□ -0.98
TRAPPC3-202ENST00000373162 USH2AO75445 5202 aa8.93□□□□□ -0.98
TRAPPC3-202ENST00000373162 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC3-202ENST00000373162 LINC00846Q9NV44 126 aa8.9□□□□□ -0.98
TRAPPC3-202ENST00000373162 KRTAP9-7A8MTY7 169 aa8.89□□□□□ -0.99
TRAPPC3-202ENST00000373162 A8MWP4 228 aa8.89□□□□□ -0.99
TRAPPC3-202ENST00000373162 Q6ZVQ6 151 aa8.89□□□□□ -0.99
TRAPPC3-202ENST00000373162 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
TRAPPC3-202ENST00000373162 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
TRAPPC3-202ENST00000373162 C8orf17Q9NRJ1 99 aa8.88□□□□□ -0.99
TRAPPC3-202ENST00000373162 FAM236DA0A1B0GTK5 79 aa8.86□□□□□ -0.99
TRAPPC3-202ENST00000373162 MT1FP04733 61 aa8.86□□□□□ -0.99
TRAPPC3-202ENST00000373162 FAM236CP0DP71 79 aa8.86□□□□□ -0.99
TRAPPC3-202ENST00000373162 UBL5Q9BZL1 73 aa8.86□□□□□ -0.99
TRAPPC3-202ENST00000373162 NDUFB1O75438 58 aa8.85□□□□□ -0.99
TRAPPC3-202ENST00000373162 SPINK7P58062 85 aa8.84□□□□□ -0.99
TRAPPC3-202ENST00000373162 BPY2O14599 106 aa8.83□□□□□ -1
TRAPPC3-202ENST00000373162 ACYP1P07311 99 aa8.81□□□□□ -1
TRAPPC3-202ENST00000373162 PRR15Q8IV56 129 aa8.81□□□□□ -1
TRAPPC3-202ENST00000373162 FAM240AA0A1B0GVK7 77 aa8.8□□□□□ -1
TRAPPC3-202ENST00000373162 KRTAP9-3Q9BYQ3 159 aa8.8□□□□□ -1
TRAPPC3-202ENST00000373162 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
TRAPPC3-202ENST00000373162 MMP24-AS1A0A0U1RRL7 71 aa8.78□□□□□ -1
TRAPPC3-202ENST00000373162 LCE2BO14633 110 aa8.78□□□□□ -1
TRAPPC3-202ENST00000373162 K7EQZ3 153 aa8.77□□□□□ -1.01
TRAPPC3-202ENST00000373162 Q8N9L7 120 aa8.73□□□□□ -1.01
TRAPPC3-202ENST00000373162 TMEM254Q8TBM7 123 aa8.73□□□□□ -1.01
TRAPPC3-202ENST00000373162 J3QR89 54 aa8.72□□□□□ -1.01
TRAPPC3-202ENST00000373162 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.02
TRAPPC3-202ENST00000373162 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.02
TRAPPC3-202ENST00000373162 CXCL6P80162 114 aa8.7□□□□□ -1.02
TRAPPC3-202ENST00000373162 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
TRAPPC3-202ENST00000373162 hDV103S1A0JD37 113 aa8.65□□□□□ -1.02
TRAPPC3-202ENST00000373162 ATP5EP2Q5VTU8 51 aa8.65□□□□□ -1.02
TRAPPC3-202ENST00000373162 LINC00643Q86TS7 51 aa8.63□□□□□ -1.03
TRAPPC3-202ENST00000373162 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
TRAPPC3-202ENST00000373162 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
TRAPPC3-202ENST00000373162 HCG22E2RYF7 251 aa8.6□□□□□ -1.03
TRAPPC3-202ENST00000373162 Q5W150 140 aa8.6□□□□□ -1.03
TRAPPC3-202ENST00000373162 K7ERU9 68 aa8.59□□□□□ -1.03
TRAPPC3-202ENST00000373162 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
TRAPPC3-202ENST00000373162 MACF1Q9UPN3 7388 aaKnown RBP8.57□□□□□ -1.04
TRAPPC3-202ENST00000373162 NDUFS5O43920 106 aa8.56□□□□□ -1.04
TRAPPC3-202ENST00000373162 HIST1H4AP62805 103 aaKnown RBP8.54□□□□□ -1.04
TRAPPC3-202ENST00000373162 H1FX-AS1Q4G0G2 97 aa8.53□□□□□ -1.04
TRAPPC3-202ENST00000373162 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
TRAPPC3-202ENST00000373162 KRTAP19-6Q3LI70 58 aa8.48□□□□□ -1.05
TRAPPC3-202ENST00000373162 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
TRAPPC3-202ENST00000373162 A0A087WVE0 104 aa8.47□□□□□ -1.05
TRAPPC3-202ENST00000373162 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
TRAPPC3-202ENST00000373162 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
TRAPPC3-202ENST00000373162 MT-ATP8P03928 68 aa8.39□□□□□ -1.07
TRAPPC3-202ENST00000373162 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
TRAPPC3-202ENST00000373162 KRTAP3-1Q9BYR8 98 aa8.37□□□□□ -1.07
TRAPPC3-202ENST00000373162 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
TRAPPC3-202ENST00000373162 UQCRQO14949 82 aa8.29□□□□□ -1.08
TRAPPC3-202ENST00000373162 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
TRAPPC3-202ENST00000373162 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
TRAPPC3-202ENST00000373162 SCGB1A1P11684 91 aa8.25□□□□□ -1.09
TRAPPC3-202ENST00000373162 FAM236AA0A1B0GUQ0 79 aa8.22□□□□□ -1.09
TRAPPC3-202ENST00000373162 FAM236BA0A1B0GV22 79 aa8.22□□□□□ -1.09
TRAPPC3-202ENST00000373162 H0Y9P7 68 aa8.22□□□□□ -1.09
TRAPPC3-202ENST00000373162 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
TRAPPC3-202ENST00000373162 ATOX1O00244 68 aa8.2□□□□□ -1.1
TRAPPC3-202ENST00000373162 KRTAP6-3Q3LI67 103 aa8.2□□□□□ -1.1
TRAPPC3-202ENST00000373162 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms