RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 C9orf92A6NGG3 77 aa10.13□□□□□ -0.79
FAM3A-204ENST00000369643 TPRXLQ17RH7 258 aa10.13□□□□□ -0.79
FAM3A-204ENST00000369643 UBL5Q9BZL1 73 aa10.12□□□□□ -0.79
FAM3A-204ENST00000369643 RNF213Q63HN8 5207 aa10.12□□□□□ -0.79
FAM3A-204ENST00000369643 IGKV4-1P06312 121 aa10.08□□□□□ -0.8
FAM3A-204ENST00000369643 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
FAM3A-204ENST00000369643 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
FAM3A-204ENST00000369643 XP32Q5T750 250 aa10.06□□□□□ -0.8
FAM3A-204ENST00000369643 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
FAM3A-204ENST00000369643 IGKV3D-7A0A0C4DH55 119 aa10.03□□□□□ -0.8
FAM3A-204ENST00000369643 A0A1B0GW54 56 aa10.03□□□□□ -0.8
FAM3A-204ENST00000369643 HIST1H4AP62805 103 aaKnown RBP10.02□□□□□ -0.8
FAM3A-204ENST00000369643 Q6ZVQ6 151 aa10.02□□□□□ -0.8
FAM3A-204ENST00000369643 DSCR10P59022 87 aa10.02□□□□□ -0.81
FAM3A-204ENST00000369643 NREPQ16612 68 aa10□□□□□ -0.81
FAM3A-204ENST00000369643 ATOX1O00244 68 aa9.99□□□□□ -0.81
FAM3A-204ENST00000369643 CXCL6P80162 114 aa9.98□□□□□ -0.81
FAM3A-204ENST00000369643 MUC2Q02817 5179 aa9.96□□□□□ -0.81
FAM3A-204ENST00000369643 IGHV6-1A0A0B4J1U7 121 aa9.96□□□□□ -0.82
FAM3A-204ENST00000369643 KRTAP16-1A8MUX0 517 aa9.95□□□□□ -0.82
FAM3A-204ENST00000369643 A0A1B0GVX0 72 aa9.94□□□□□ -0.82
FAM3A-204ENST00000369643 Q8N9L7 120 aa9.93□□□□□ -0.82
FAM3A-204ENST00000369643 K7EQZ3 153 aa9.92□□□□□ -0.82
FAM3A-204ENST00000369643 A8MWP4 228 aa9.91□□□□□ -0.82
FAM3A-204ENST00000369643 J3KT08 172 aa9.91□□□□□ -0.82
FAM3A-204ENST00000369643 UQCRQO14949 82 aa9.9□□□□□ -0.82
FAM3A-204ENST00000369643 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
FAM3A-204ENST00000369643 KRTAP4-1Q9BYQ7 146 aa9.89□□□□□ -0.83
FAM3A-204ENST00000369643 A0A087WVE0 104 aa9.88□□□□□ -0.83
FAM3A-204ENST00000369643 BPY2O14599 106 aa9.88□□□□□ -0.83
FAM3A-204ENST00000369643 COX7CP15954 63 aa9.87□□□□□ -0.83
FAM3A-204ENST00000369643 LINC00313P59037 77 aa9.87□□□□□ -0.83
FAM3A-204ENST00000369643 PRR15Q8IV56 129 aa9.87□□□□□ -0.83
FAM3A-204ENST00000369643 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
FAM3A-204ENST00000369643 SERP2Q8N6R1 65 aa9.85□□□□□ -0.83
FAM3A-204ENST00000369643 MMP24-AS1A0A0U1RRL7 71 aa9.84□□□□□ -0.83
FAM3A-204ENST00000369643 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
FAM3A-204ENST00000369643 SMIM20Q8N5G0 67 aa9.83□□□□□ -0.84
FAM3A-204ENST00000369643 C20orf166-AS1Q96NR2 134 aa9.82□□□□□ -0.84
FAM3A-204ENST00000369643 A8MUU9 505 aa9.82□□□□□ -0.84
FAM3A-204ENST00000369643 PCOTHQ58A44 107 aa9.82□□□□□ -0.84
FAM3A-204ENST00000369643 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
FAM3A-204ENST00000369643 NDUFB1O75438 58 aa9.79□□□□□ -0.84
FAM3A-204ENST00000369643 Q75L30 129 aa9.79□□□□□ -0.84
FAM3A-204ENST00000369643 TRAV7A0A075B6U4 112 aa9.74□□□□□ -0.85
FAM3A-204ENST00000369643 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
FAM3A-204ENST00000369643 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
FAM3A-204ENST00000369643 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.86
FAM3A-204ENST00000369643 FAT4Q6V0I7 4981 aa9.69□□□□□ -0.86
FAM3A-204ENST00000369643 hDV103S1A0JD37 113 aa9.68□□□□□ -0.86
FAM3A-204ENST00000369643 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
FAM3A-204ENST00000369643 MRPL34Q9BQ48 92 aaKnown RBP9.67□□□□□ -0.86
FAM3A-204ENST00000369643 CASC2Q6XLA1 102 aa9.65□□□□□ -0.86
FAM3A-204ENST00000369643 HCG22E2RYF7 251 aa9.64□□□□□ -0.87
FAM3A-204ENST00000369643 ATP11AUNQ6ZP68 121 aa9.62□□□□□ -0.87
FAM3A-204ENST00000369643 TMEM258P61165 79 aa9.6□□□□□ -0.87
FAM3A-204ENST00000369643 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
FAM3A-204ENST00000369643 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
FAM3A-204ENST00000369643 C20orf197Q8N268 126 aa9.57□□□□□ -0.88
FAM3A-204ENST00000369643 Q5W150 140 aa9.56□□□□□ -0.88
FAM3A-204ENST00000369643 NDUFS5O43920 106 aa9.56□□□□□ -0.88
FAM3A-204ENST00000369643 KRTAP19-2Q3LHN2 52 aa9.56□□□□□ -0.88
FAM3A-204ENST00000369643 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
FAM3A-204ENST00000369643 NDUFC1O43677 76 aa9.53□□□□□ -0.88
FAM3A-204ENST00000369643 CYSTM1Q9H1C7 97 aa9.51□□□□□ -0.89
FAM3A-204ENST00000369643 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
FAM3A-204ENST00000369643 FLGP20930 4061 aaPredicted RBP9.46□□□□□ -0.89
FAM3A-204ENST00000369643 H7BZZ5 65 aa9.45□□□□□ -0.9
FAM3A-204ENST00000369643 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
FAM3A-204ENST00000369643 A0A0U1RQV1 116 aa9.43□□□□□ -0.9
FAM3A-204ENST00000369643 HRES1P13985 223 aa9.43□□□□□ -0.9
FAM3A-204ENST00000369643 SNURFQ9Y675 71 aa9.43□□□□□ -0.9
FAM3A-204ENST00000369643 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
FAM3A-204ENST00000369643 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
FAM3A-204ENST00000369643 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
FAM3A-204ENST00000369643 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
FAM3A-204ENST00000369643 SPINK7P58062 85 aa9.41□□□□□ -0.9
FAM3A-204ENST00000369643 MPLKIPQ8TAP9 179 aa9.36□□□□□ -0.91
FAM3A-204ENST00000369643 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
FAM3A-204ENST00000369643 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
FAM3A-204ENST00000369643 H3BPC8 53 aa9.33□□□□□ -0.92
FAM3A-204ENST00000369643 MP68P56378 58 aa9.33□□□□□ -0.92
FAM3A-204ENST00000369643 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
FAM3A-204ENST00000369643 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
FAM3A-204ENST00000369643 SERP1Q9Y6X1 66 aa9.3□□□□□ -0.92
FAM3A-204ENST00000369643 MT1HP80294 61 aa9.26□□□□□ -0.93
FAM3A-204ENST00000369643 TRAV22A0A0B4J277 110 aa9.26□□□□□ -0.93
FAM3A-204ENST00000369643 C7orf65Q6ZTY9 151 aa9.26□□□□□ -0.93
FAM3A-204ENST00000369643 H0Y9P7 68 aa9.23□□□□□ -0.93
FAM3A-204ENST00000369643 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.93
FAM3A-204ENST00000369643 LINC00208Q96KT6 92 aa9.19□□□□□ -0.94
FAM3A-204ENST00000369643 CYP4F30PQ9H0H9 118 aa9.17□□□□□ -0.94
FAM3A-204ENST00000369643 C4orf26Q17RF5 130 aa9.16□□□□□ -0.94
FAM3A-204ENST00000369643 RBM12B-AS1Q9P1G2 102 aa9.15□□□□□ -0.95
FAM3A-204ENST00000369643 C1orf64Q8NEQ6 169 aa9.14□□□□□ -0.95
FAM3A-204ENST00000369643 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
FAM3A-204ENST00000369643 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
FAM3A-204ENST00000369643 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
FAM3A-204ENST00000369643 LOC101927531A0A1B0GV80 90 aa9.1□□□□□ -0.95
FAM3A-204ENST00000369643 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms