RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TSTD3H0UI37 97 aa10.59□□□□□ -0.71
SMNDC1-201ENST00000369592 VPS25Q9BRG1 176 aa10.58□□□□□ -0.72
SMNDC1-201ENST00000369592 KRTAP10-6P60371 365 aaPredicted RBP10.57□□□□□ -0.72
SMNDC1-201ENST00000369592 Q6ZQT0 140 aa10.57□□□□□ -0.72
SMNDC1-201ENST00000369592 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
SMNDC1-201ENST00000369592 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
SMNDC1-201ENST00000369592 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
SMNDC1-201ENST00000369592 COX6B2Q6YFQ2 88 aa10.55□□□□□ -0.72
SMNDC1-201ENST00000369592 TRBV20-1A0A075B6N2 111 aa10.53□□□□□ -0.72
SMNDC1-201ENST00000369592 IGHV6-1A0A0B4J1U7 121 aa10.52□□□□□ -0.73
SMNDC1-201ENST00000369592 A0A1B0GVX0 72 aa10.52□□□□□ -0.73
SMNDC1-201ENST00000369592 A0A1B0GW54 56 aa10.52□□□□□ -0.73
SMNDC1-201ENST00000369592 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.52□□□□□ -0.73
SMNDC1-201ENST00000369592 LYRM7Q5U5X0 104 aa10.51□□□□□ -0.73
SMNDC1-201ENST00000369592 C8orf87E5RJ46 101 aa10.5□□□□□ -0.73
SMNDC1-201ENST00000369592 J3KT08 172 aa10.49□□□□□ -0.73
SMNDC1-201ENST00000369592 PDE6GP18545 87 aa10.49□□□□□ -0.73
SMNDC1-201ENST00000369592 BATFQ16520 125 aa10.49□□□□□ -0.73
SMNDC1-201ENST00000369592 TAX1BP3O14907 124 aa10.48□□□□□ -0.73
SMNDC1-201ENST00000369592 C9orf118A6NHY6 69 aa10.47□□□□□ -0.73
SMNDC1-201ENST00000369592 C14orf132Q9NPU4 83 aa10.45□□□□□ -0.74
SMNDC1-201ENST00000369592 M0R2T5 61 aa10.43□□□□□ -0.74
SMNDC1-201ENST00000369592 A0A1W2PPM0 123 aa10.42□□□□□ -0.74
SMNDC1-201ENST00000369592 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
SMNDC1-201ENST00000369592 H3BT86 120 aa10.39□□□□□ -0.75
SMNDC1-201ENST00000369592 HRES1P13985 223 aa10.39□□□□□ -0.75
SMNDC1-201ENST00000369592 A8MWP4 228 aa10.38□□□□□ -0.75
SMNDC1-201ENST00000369592 Q8N9P0 234 aaPredicted RBP10.38□□□□□ -0.75
SMNDC1-201ENST00000369592 IGKV3D-7A0A0C4DH55 119 aa10.36□□□□□ -0.75
SMNDC1-201ENST00000369592 NDUFB1O75438 58 aa10.35□□□□□ -0.75
SMNDC1-201ENST00000369592 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
SMNDC1-201ENST00000369592 ZCCHC13Q8WW36 166 aaKnown RBP10.33□□□□□ -0.76
SMNDC1-201ENST00000369592 MTURNQ8N3F0 131 aa10.32□□□□□ -0.76
SMNDC1-201ENST00000369592 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
SMNDC1-201ENST00000369592 NREPQ16612 68 aa10.29□□□□□ -0.76
SMNDC1-201ENST00000369592 KRTAP9-8Q9BYQ0 159 aa10.26□□□□□ -0.77
SMNDC1-201ENST00000369592 Q6ZVQ6 151 aa10.24□□□□□ -0.77
SMNDC1-201ENST00000369592 SPCS1Q9Y6A9 102 aa10.24□□□□□ -0.77
SMNDC1-201ENST00000369592 MMP24-AS1A0A0U1RRL7 71 aa10.23□□□□□ -0.77
SMNDC1-201ENST00000369592 SPINK7P58062 85 aa10.22□□□□□ -0.77
SMNDC1-201ENST00000369592 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
SMNDC1-201ENST00000369592 SSPOA2VEC9 5147 aa10.21□□□□□ -0.77
SMNDC1-201ENST00000369592 PRO0461Q9UI25 63 aa10.2□□□□□ -0.78
SMNDC1-201ENST00000369592 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
SMNDC1-201ENST00000369592 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
SMNDC1-201ENST00000369592 KRTAP4-8Q9BYQ9 185 aa10.19□□□□□ -0.78
SMNDC1-201ENST00000369592 USH2AO75445 5202 aa10.19□□□□□ -0.78
SMNDC1-201ENST00000369592 FAM236DA0A1B0GTK5 79 aa10.18□□□□□ -0.78
SMNDC1-201ENST00000369592 K7EQZ3 153 aa10.18□□□□□ -0.78
SMNDC1-201ENST00000369592 FAM236CP0DP71 79 aa10.18□□□□□ -0.78
SMNDC1-201ENST00000369592 MRPL34Q9BQ48 92 aaKnown RBP10.16□□□□□ -0.78
SMNDC1-201ENST00000369592 BPY2O14599 106 aa10.12□□□□□ -0.79
SMNDC1-201ENST00000369592 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
SMNDC1-201ENST00000369592 K7EP34 96 aa10.11□□□□□ -0.79
SMNDC1-201ENST00000369592 MT2AP02795 61 aa10.09□□□□□ -0.79
SMNDC1-201ENST00000369592 FCGBPQ9Y6R7 5405 aaPredicted RBP10.07□□□□□ -0.8
SMNDC1-201ENST00000369592 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
SMNDC1-201ENST00000369592 Q8N9L7 120 aa10.03□□□□□ -0.8
SMNDC1-201ENST00000369592 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
SMNDC1-201ENST00000369592 MT1FP04733 61 aa10.01□□□□□ -0.81
SMNDC1-201ENST00000369592 Q5W150 140 aa10□□□□□ -0.81
SMNDC1-201ENST00000369592 NDUFS5O43920 106 aa9.96□□□□□ -0.82
SMNDC1-201ENST00000369592 CASC2Q6XLA1 102 aa9.96□□□□□ -0.82
SMNDC1-201ENST00000369592 GTF2H5Q6ZYL4 71 aa9.94□□□□□ -0.82
SMNDC1-201ENST00000369592 KRTAP9-3Q9BYQ3 159 aa9.94□□□□□ -0.82
SMNDC1-201ENST00000369592 UBL5Q9BZL1 73 aa9.94□□□□□ -0.82
SMNDC1-201ENST00000369592 F8W1H4 67 aa9.92□□□□□ -0.82
SMNDC1-201ENST00000369592 SYNE2Q8WXH0 6885 aaKnown RBP9.92□□□□□ -0.82
SMNDC1-201ENST00000369592 PCP4L1A6NKN8 68 aa9.91□□□□□ -0.82
SMNDC1-201ENST00000369592 HCG22E2RYF7 251 aa9.9□□□□□ -0.82
SMNDC1-201ENST00000369592 MACF1Q9UPN3 7388 aaKnown RBP9.89□□□□□ -0.83
SMNDC1-201ENST00000369592 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
SMNDC1-201ENST00000369592 ETDBQ3ZM63 59 aa9.87□□□□□ -0.83
SMNDC1-201ENST00000369592 C7orf65Q6ZTY9 151 aa9.87□□□□□ -0.83
SMNDC1-201ENST00000369592 KRTAP19-1Q8IUB9 90 aa9.87□□□□□ -0.83
SMNDC1-201ENST00000369592 CXCL6P80162 114 aa9.86□□□□□ -0.83
SMNDC1-201ENST00000369592 IGKV2D-30A0A075B6S6 120 aa9.85□□□□□ -0.83
SMNDC1-201ENST00000369592 IGKV2-30P06310 120 aa9.85□□□□□ -0.83
SMNDC1-201ENST00000369592 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
SMNDC1-201ENST00000369592 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
SMNDC1-201ENST00000369592 KRTAP4-12Q9BQ66 201 aa9.72□□□□□ -0.85
SMNDC1-201ENST00000369592 KRTAP3-1Q9BYR8 98 aa9.69□□□□□ -0.86
SMNDC1-201ENST00000369592 TP53AIP1Q9HCN2 124 aa9.68□□□□□ -0.86
SMNDC1-201ENST00000369592 LCE3BQ5TA77 95 aa9.67□□□□□ -0.86
SMNDC1-201ENST00000369592 ACYP1P07311 99 aa9.65□□□□□ -0.86
SMNDC1-201ENST00000369592 FAM240AA0A1B0GVK7 77 aa9.64□□□□□ -0.87
SMNDC1-201ENST00000369592 ATP5EP2Q5VTU8 51 aa9.55□□□□□ -0.88
SMNDC1-201ENST00000369592 C1orf64Q8NEQ6 169 aa9.55□□□□□ -0.88
SMNDC1-201ENST00000369592 KRTAP9-9Q9BYP9 154 aa9.54□□□□□ -0.88
SMNDC1-201ENST00000369592 KRTAP9-4Q9BYQ2 154 aa9.54□□□□□ -0.88
SMNDC1-201ENST00000369592 KRTAP6-3Q3LI67 103 aa9.52□□□□□ -0.89
SMNDC1-201ENST00000369592 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
SMNDC1-201ENST00000369592 KRTAP19-6Q3LI70 58 aa9.51□□□□□ -0.89
SMNDC1-201ENST00000369592 TRAV22A0A0B4J277 110 aa9.47□□□□□ -0.89
SMNDC1-201ENST00000369592 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
SMNDC1-201ENST00000369592 S4R3F8 94 aa9.47□□□□□ -0.89
SMNDC1-201ENST00000369592 LCA10Q71F78 164 aa9.46□□□□□ -0.9
SMNDC1-201ENST00000369592 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
SMNDC1-201ENST00000369592 A0A1B0GV90 55 aa9.43□□□□□ -0.9
SMNDC1-201ENST00000369592 HIST1H4AP62805 103 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms