RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 BPY2O14599 106 aa6.54□□□□□ -1.36
CSNK1E-202ENST00000366216 CD164Q04900 197 aa6.54□□□□□ -1.36
CSNK1E-202ENST00000366216 A0A087X002 238 aa6.53□□□□□ -1.36
CSNK1E-202ENST00000366216 PRR26Q8N8Z3 221 aa6.53□□□□□ -1.36
CSNK1E-202ENST00000366216 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
CSNK1E-202ENST00000366216 HIST1H4AP62805 103 aaKnown RBP6.51□□□□□ -1.37
CSNK1E-202ENST00000366216 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
CSNK1E-202ENST00000366216 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
CSNK1E-202ENST00000366216 A0A087WVE0 104 aa6.48□□□□□ -1.37
CSNK1E-202ENST00000366216 FAM236AA0A1B0GUQ0 79 aa6.48□□□□□ -1.37
CSNK1E-202ENST00000366216 FAM236BA0A1B0GV22 79 aa6.48□□□□□ -1.37
CSNK1E-202ENST00000366216 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
CSNK1E-202ENST00000366216 DSCR10P59022 87 aa6.48□□□□□ -1.37
CSNK1E-202ENST00000366216 HRCT1Q6UXD1 115 aa6.48□□□□□ -1.37
CSNK1E-202ENST00000366216 J3KT08 172 aa6.47□□□□□ -1.37
CSNK1E-202ENST00000366216 PCP4P48539 62 aa6.47□□□□□ -1.37
CSNK1E-202ENST00000366216 Q5XG85 94 aa6.46□□□□□ -1.38
CSNK1E-202ENST00000366216 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
CSNK1E-202ENST00000366216 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
CSNK1E-202ENST00000366216 Q96NJ1 140 aa6.45□□□□□ -1.38
CSNK1E-202ENST00000366216 ATOX1O00244 68 aa6.44□□□□□ -1.38
CSNK1E-202ENST00000366216 Q8N9L7 120 aa6.44□□□□□ -1.38
CSNK1E-202ENST00000366216 A8MWP4 228 aa6.43□□□□□ -1.38
CSNK1E-202ENST00000366216 DEFB116Q30KQ4 102 aa6.43□□□□□ -1.38
CSNK1E-202ENST00000366216 K7EQZ3 153 aa6.42□□□□□ -1.38
CSNK1E-202ENST00000366216 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
CSNK1E-202ENST00000366216 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
CSNK1E-202ENST00000366216 LIMD2Q9BT23 127 aa6.41□□□□□ -1.38
CSNK1E-202ENST00000366216 SPINK1P00995 79 aa6.4□□□□□ -1.38
CSNK1E-202ENST00000366216 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.38
CSNK1E-202ENST00000366216 PRR15Q8IV56 129 aa6.4□□□□□ -1.38
CSNK1E-202ENST00000366216 NDUFB1O75438 58 aa6.39□□□□□ -1.39
CSNK1E-202ENST00000366216 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
CSNK1E-202ENST00000366216 XP32Q5T750 250 aa6.38□□□□□ -1.39
CSNK1E-202ENST00000366216 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
CSNK1E-202ENST00000366216 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
CSNK1E-202ENST00000366216 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
CSNK1E-202ENST00000366216 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
CSNK1E-202ENST00000366216 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
CSNK1E-202ENST00000366216 SERP2Q8N6R1 65 aa6.35□□□□□ -1.39
CSNK1E-202ENST00000366216 C1orf195Q5TG92 126 aa6.34□□□□□ -1.39
CSNK1E-202ENST00000366216 TRAV7A0A075B6U4 112 aa6.33□□□□□ -1.4
CSNK1E-202ENST00000366216 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
CSNK1E-202ENST00000366216 COX7CP15954 63 aa6.32□□□□□ -1.4
CSNK1E-202ENST00000366216 UQCRQO14949 82 aa6.31□□□□□ -1.4
CSNK1E-202ENST00000366216 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
CSNK1E-202ENST00000366216 C8orf17Q9NRJ1 99 aa6.31□□□□□ -1.4
CSNK1E-202ENST00000366216 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
CSNK1E-202ENST00000366216 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
CSNK1E-202ENST00000366216 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
CSNK1E-202ENST00000366216 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
CSNK1E-202ENST00000366216 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
CSNK1E-202ENST00000366216 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
CSNK1E-202ENST00000366216 CCDC179H3BU77 68 aa6.27□□□□□ -1.41
CSNK1E-202ENST00000366216 RETNLBQ9BQ08 111 aa6.27□□□□□ -1.41
CSNK1E-202ENST00000366216 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.41
CSNK1E-202ENST00000366216 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
CSNK1E-202ENST00000366216 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
CSNK1E-202ENST00000366216 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
CSNK1E-202ENST00000366216 LINC00313P59037 77 aa6.24□□□□□ -1.41
CSNK1E-202ENST00000366216 MRPL34Q9BQ48 92 aaKnown RBP6.24□□□□□ -1.41
CSNK1E-202ENST00000366216 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
CSNK1E-202ENST00000366216 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
CSNK1E-202ENST00000366216 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
CSNK1E-202ENST00000366216 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
CSNK1E-202ENST00000366216 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
CSNK1E-202ENST00000366216 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
CSNK1E-202ENST00000366216 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
CSNK1E-202ENST00000366216 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
CSNK1E-202ENST00000366216 H3BPC8 53 aa6.16□□□□□ -1.42
CSNK1E-202ENST00000366216 NDUFS5O43920 106 aa6.15□□□□□ -1.42
CSNK1E-202ENST00000366216 MP68P56378 58 aa6.15□□□□□ -1.42
CSNK1E-202ENST00000366216 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.42
CSNK1E-202ENST00000366216 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
CSNK1E-202ENST00000366216 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
CSNK1E-202ENST00000366216 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
CSNK1E-202ENST00000366216 H0Y9P7 68 aa6.13□□□□□ -1.43
CSNK1E-202ENST00000366216 NDUFC1O43677 76 aa6.13□□□□□ -1.43
CSNK1E-202ENST00000366216 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
CSNK1E-202ENST00000366216 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
CSNK1E-202ENST00000366216 SNURFQ9Y675 71 aa6.13□□□□□ -1.43
CSNK1E-202ENST00000366216 ZCCHC13Q8WW36 166 aaKnown RBP6.12□□□□□ -1.43
CSNK1E-202ENST00000366216 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
CSNK1E-202ENST00000366216 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
CSNK1E-202ENST00000366216 H7BZZ5 65 aa6.09□□□□□ -1.43
CSNK1E-202ENST00000366216 KRTAP13-3Q3SY46 172 aa6.09□□□□□ -1.43
CSNK1E-202ENST00000366216 LINC00208Q96KT6 92 aa6.09□□□□□ -1.43
CSNK1E-202ENST00000366216 MT1HP80294 61 aa6.08□□□□□ -1.44
CSNK1E-202ENST00000366216 TMEM258P61165 79 aa6.07□□□□□ -1.44
CSNK1E-202ENST00000366216 Q5W150 140 aa6.07□□□□□ -1.44
CSNK1E-202ENST00000366216 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
CSNK1E-202ENST00000366216 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
CSNK1E-202ENST00000366216 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
CSNK1E-202ENST00000366216 A8MUU9 505 aa6.06□□□□□ -1.44
CSNK1E-202ENST00000366216 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
CSNK1E-202ENST00000366216 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
CSNK1E-202ENST00000366216 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
CSNK1E-202ENST00000366216 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
CSNK1E-202ENST00000366216 Q75L30 129 aa6.02□□□□□ -1.45
CSNK1E-202ENST00000366216 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 572.3 ms