RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TJP1Q07157 1748 aa-1□□□□□ -2.57
RNU6-28P-201ENST00000362378 MRPL33O75394 65 aaKnown RBP-1□□□□□ -2.57
RNU6-28P-201ENST00000362378 MYO15AQ9UKN7 3530 aa-1□□□□□ -2.57
RNU6-28P-201ENST00000362378 ITPR3Q14573 2671 aa-1.01□□□□□ -2.57
RNU6-28P-201ENST00000362378 MTORP42345 2549 aa-1.01□□□□□ -2.57
RNU6-28P-201ENST00000362378 KCNQ1DNQ9H478 68 aa-1.01□□□□□ -2.57
RNU6-28P-201ENST00000362378 HFM1A2PYH4 1435 aa-1.01□□□□□ -2.57
RNU6-28P-201ENST00000362378 KALRNO60229 2985 aa-1.02□□□□□ -2.57
RNU6-28P-201ENST00000362378 RALGAPBQ86X10 1494 aa-1.02□□□□□ -2.57
RNU6-28P-201ENST00000362378 SACSQ9NZJ4 4579 aa-1.02□□□□□ -2.57
RNU6-28P-201ENST00000362378 MT1HL1P0DM35 61 aa-1.03□□□□□ -2.57
RNU6-28P-201ENST00000362378 C18orf32Q8TCD1 76 aa-1.03□□□□□ -2.57
RNU6-28P-201ENST00000362378 ITPR2Q14571 2701 aa-1.04□□□□□ -2.58
RNU6-28P-201ENST00000362378 CEP290O15078 2479 aa-1.05□□□□□ -2.58
RNU6-28P-201ENST00000362378 UBL5Q9BZL1 73 aa-1.05□□□□□ -2.58
RNU6-28P-201ENST00000362378 S4R3F8 94 aa-1.05□□□□□ -2.58
RNU6-28P-201ENST00000362378 KIAA0586Q9BVV6 1533 aa-1.05□□□□□ -2.58
RNU6-28P-201ENST00000362378 MT1BP07438 61 aa-1.06□□□□□ -2.58
RNU6-28P-201ENST00000362378 DEFB106AQ8N104 65 aa-1.06□□□□□ -2.58
RNU6-28P-201ENST00000362378 MGAM2Q2M2H8 2515 aa-1.06□□□□□ -2.58
RNU6-28P-201ENST00000362378 DNAH1Q9P2D7 4330 aa-1.06□□□□□ -2.58
RNU6-28P-201ENST00000362378 ANKARQ7Z5J8 1434 aa-1.06□□□□□ -2.58
RNU6-28P-201ENST00000362378 RRBP1Q9P2E9 1410 aaKnown RBP-1.06□□□□□ -2.58
RNU6-28P-201ENST00000362378 ITPR1Q14643 2758 aa-1.07□□□□□ -2.58
RNU6-28P-201ENST00000362378 PKD1L2Q7Z442 2459 aa-1.07□□□□□ -2.58
RNU6-28P-201ENST00000362378 ABCA8O94911 1581 aa-1.07□□□□□ -2.58
RNU6-28P-201ENST00000362378 LMTK2Q8IWU2 1503 aa-1.07□□□□□ -2.58
RNU6-28P-201ENST00000362378 DNAH2Q9P225 4427 aa-1.07□□□□□ -2.58
RNU6-28P-201ENST00000362378 LRRK2Q5S007 2527 aa-1.08□□□□□ -2.58
RNU6-28P-201ENST00000362378 INO80Q9ULG1 1556 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-28P-201ENST00000362378 UTP20O75691 2785 aaKnown RBP-1.08□□□□□ -2.58
RNU6-28P-201ENST00000362378 CRIP1P50238 77 aa-1.08□□□□□ -2.58
RNU6-28P-201ENST00000362378 NBEAQ8NFP9 2946 aa-1.08□□□□□ -2.58
RNU6-28P-201ENST00000362378 ITSN2Q9NZM3 1697 aa-1.1□□□□□ -2.58
RNU6-28P-201ENST00000362378 NHSQ6T4R5 1651 aa-1.1□□□□□ -2.59
RNU6-28P-201ENST00000362378 CCDC168Q8NDH2 2452 aa-1.11□□□□□ -2.59
RNU6-28P-201ENST00000362378 ENHOQ6UWT2 76 aa-1.11□□□□□ -2.59
RNU6-28P-201ENST00000362378 NRAPQ86VF7 1730 aa-1.12□□□□□ -2.59
RNU6-28P-201ENST00000362378 PARP4Q9UKK3 1724 aaKnown RBP-1.12□□□□□ -2.59
RNU6-28P-201ENST00000362378 FAM186AA6NE01 2351 aa-1.12□□□□□ -2.59
RNU6-28P-201ENST00000362378 DNAH8Q96JB1 4490 aa-1.12□□□□□ -2.59
RNU6-28P-201ENST00000362378 ANKRD36CQ5JPF3 1778 aa-1.13□□□□□ -2.59
RNU6-28P-201ENST00000362378 ACACAQ13085 2346 aa-1.13□□□□□ -2.59
RNU6-28P-201ENST00000362378 CHD7Q9P2D1 2997 aa-1.13□□□□□ -2.59
RNU6-28P-201ENST00000362378 ETDCA0A1B0GVM5 59 aa-1.15□□□□□ -2.59
RNU6-28P-201ENST00000362378 WT1-ASQ06250 92 aa-1.15□□□□□ -2.59
RNU6-28P-201ENST00000362378 DEFB110Q30KQ9 67 aa-1.15□□□□□ -2.59
RNU6-28P-201ENST00000362378 LRRIQ1Q96JM4 1722 aa-1.15□□□□□ -2.59
RNU6-28P-201ENST00000362378 BPTFQ12830 3046 aa-1.15□□□□□ -2.59
RNU6-28P-201ENST00000362378 EYSQ5T1H1 3165 aa-1.16□□□□□ -2.59
RNU6-28P-201ENST00000362378 H3BVH4 76 aa-1.16□□□□□ -2.6
RNU6-28P-201ENST00000362378 TRIOO75962 3097 aa-1.16□□□□□ -2.6
RNU6-28P-201ENST00000362378 TEX15Q9BXT5 2789 aa-1.17□□□□□ -2.6
RNU6-28P-201ENST00000362378 ACACBO00763 2458 aa-1.17□□□□□ -2.6
RNU6-28P-201ENST00000362378 CFAP46Q8IYW2 2715 aa-1.17□□□□□ -2.6
RNU6-28P-201ENST00000362378 RANBP2P49792 3224 aaKnown RBP-1.18□□□□□ -2.6
RNU6-28P-201ENST00000362378 KIF1AQ12756 1690 aa-1.18□□□□□ -2.6
RNU6-28P-201ENST00000362378 CSMD2Q7Z408 3487 aa-1.18□□□□□ -2.6
RNU6-28P-201ENST00000362378 DIP2AQ14689 1571 aa-1.18□□□□□ -2.6
RNU6-28P-201ENST00000362378 TOGARAM1Q9Y4F4 1720 aa-1.18□□□□□ -2.6
RNU6-28P-201ENST00000362378 RPS27P42677 84 aaKnown RBP-1.19□□□□□ -2.6
RNU6-28P-201ENST00000362378 RPS27LQ71UM5 84 aaKnown RBP-1.19□□□□□ -2.6
RNU6-28P-201ENST00000362378 CDC42BPGQ6DT37 1551 aa-1.2□□□□□ -2.6
RNU6-28P-201ENST00000362378 MT1HP80294 61 aa-1.2□□□□□ -2.6
RNU6-28P-201ENST00000362378 MINOS1Q5TGZ0 78 aa-1.2□□□□□ -2.6
RNU6-28P-201ENST00000362378 DEFB114Q30KQ6 69 aa-1.21□□□□□ -2.6
RNU6-28P-201ENST00000362378 MT1MQ8N339 61 aa-1.21□□□□□ -2.6
RNU6-28P-201ENST00000362378 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-28P-201ENST00000362378 MYO5CQ9NQX4 1742 aa-1.21□□□□□ -2.6
RNU6-28P-201ENST00000362378 MT1XP80297 61 aa-1.22□□□□□ -2.6
RNU6-28P-201ENST00000362378 SRCAPQ6ZRS2 3230 aa-1.22□□□□□ -2.6
RNU6-28P-201ENST00000362378 DMXL2Q8TDJ6 3036 aa-1.22□□□□□ -2.61
RNU6-28P-201ENST00000362378 CEP295Q9C0D2 2601 aa-1.23□□□□□ -2.61
RNU6-28P-201ENST00000362378 MT2AP02795 61 aa-1.23□□□□□ -2.61
RNU6-28P-201ENST00000362378 PLECQ15149 4684 aaKnown RBP-1.23□□□□□ -2.61
RNU6-28P-201ENST00000362378 C3P01024 1663 aa-1.23□□□□□ -2.61
RNU6-28P-201ENST00000362378 ATXN8Q156A1 80 aa-1.24□□□□□ -2.61
RNU6-28P-201ENST00000362378 KRTAP8-1Q8IUC2 63 aa-1.24□□□□□ -2.61
RNU6-28P-201ENST00000362378 A0A0C4DFX4 3053 aa-1.24□□□□□ -2.61
RNU6-28P-201ENST00000362378 IQGAP3Q86VI3 1631 aa-1.25□□□□□ -2.61
RNU6-28P-201ENST00000362378 KRTAP19-5Q3LI72 72 aa-1.25□□□□□ -2.61
RNU6-28P-201ENST00000362378 IGLV5-48A0A075B6I7 105 aa-1.26□□□□□ -2.61
RNU6-28P-201ENST00000362378 ABCC6O95255 1503 aa-1.27□□□□□ -2.61
RNU6-28P-201ENST00000362378 DNAH7Q8WXX0 4024 aa-1.27□□□□□ -2.61
RNU6-28P-201ENST00000362378 SCRIBQ14160 1630 aa-1.28□□□□□ -2.61
RNU6-28P-201ENST00000362378 UGGT2Q9NYU1 1516 aa-1.28□□□□□ -2.61
RNU6-28P-201ENST00000362378 MT1GP13640 62 aa-1.28□□□□□ -2.61
RNU6-28P-201ENST00000362378 C6orf48Q9UBA6 75 aa-1.28□□□□□ -2.61
RNU6-28P-201ENST00000362378 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.28□□□□□ -2.61
RNU6-28P-201ENST00000362378 ZFHX4Q86UP3 3567 aa-1.28□□□□□ -2.61
RNU6-28P-201ENST00000362378 RELNP78509 3460 aa-1.29□□□□□ -2.62
RNU6-28P-201ENST00000362378 HILPDAQ9Y5L2 63 aa-1.29□□□□□ -2.62
RNU6-28P-201ENST00000362378 ABCA9Q8IUA7 1624 aa-1.29□□□□□ -2.62
RNU6-28P-201ENST00000362378 CMYA5Q8N3K9 4069 aa-1.3□□□□□ -2.62
RNU6-28P-201ENST00000362378 MYO9AB2RTY4 2548 aa-1.3□□□□□ -2.62
RNU6-28P-201ENST00000362378 MT1FP04733 61 aa-1.3□□□□□ -2.62
RNU6-28P-201ENST00000362378 NCBP2-AS2Q69YL0 99 aa-1.3□□□□□ -2.62
RNU6-28P-201ENST00000362378 DNMBPQ6XZF7 1577 aa-1.3□□□□□ -2.62
RNU6-28P-201ENST00000362378 MMP24-AS1A0A0U1RRL7 71 aa-1.31□□□□□ -2.62
RNU6-28P-201ENST00000362378 H3BUA1 57 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms