RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 DSCR10P59022 87 aa11.58□□□□□ -0.56
SHISA4-201ENST00000362011 FP248Q71RG6 208 aaPredicted RBP11.57□□□□□ -0.56
SHISA4-201ENST00000362011 A8MWP4 228 aa11.56□□□□□ -0.56
SHISA4-201ENST00000362011 NDUFB1O75438 58 aa11.55□□□□□ -0.56
SHISA4-201ENST00000362011 A0A1B0GVX0 72 aa11.51□□□□□ -0.57
SHISA4-201ENST00000362011 K7EQZ3 153 aa11.51□□□□□ -0.57
SHISA4-201ENST00000362011 PRR4Q16378 134 aa11.5□□□□□ -0.57
SHISA4-201ENST00000362011 Q8N9L7 120 aa11.5□□□□□ -0.57
SHISA4-201ENST00000362011 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
SHISA4-201ENST00000362011 IGLV7-46A0A075B6I9 117 aa11.48□□□□□ -0.57
SHISA4-201ENST00000362011 IGHV6-1A0A0B4J1U7 121 aa11.48□□□□□ -0.57
SHISA4-201ENST00000362011 MT-ATP8P03928 68 aa11.46□□□□□ -0.57
SHISA4-201ENST00000362011 C8orf87E5RJ46 101 aa11.44□□□□□ -0.58
SHISA4-201ENST00000362011 HIST1H4AP62805 103 aaKnown RBP11.44□□□□□ -0.58
SHISA4-201ENST00000362011 C8orf17Q9NRJ1 99 aa11.41□□□□□ -0.58
SHISA4-201ENST00000362011 LINC00313P59037 77 aa11.4□□□□□ -0.58
SHISA4-201ENST00000362011 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
SHISA4-201ENST00000362011 MUC2Q02817 5179 aa11.38□□□□□ -0.59
SHISA4-201ENST00000362011 MMP24-AS1A0A0U1RRL7 71 aa11.37□□□□□ -0.59
SHISA4-201ENST00000362011 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
SHISA4-201ENST00000362011 NOTCH2NLQ7Z3S9 236 aa11.37□□□□□ -0.59
SHISA4-201ENST00000362011 A0A087WVE0 104 aa11.35□□□□□ -0.59
SHISA4-201ENST00000362011 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
SHISA4-201ENST00000362011 KRTAP13-3Q3SY46 172 aa11.35□□□□□ -0.59
SHISA4-201ENST00000362011 TPRXLQ17RH7 258 aa11.34□□□□□ -0.59
SHISA4-201ENST00000362011 WFDC13Q8IUB5 93 aa11.33□□□□□ -0.6
SHISA4-201ENST00000362011 hDV103S1A0JD37 113 aa11.32□□□□□ -0.6
SHISA4-201ENST00000362011 CASC2Q6XLA1 102 aa11.32□□□□□ -0.6
SHISA4-201ENST00000362011 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
SHISA4-201ENST00000362011 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
SHISA4-201ENST00000362011 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.61
SHISA4-201ENST00000362011 KRTAP9-2Q9BYQ4 174 aa11.26□□□□□ -0.61
SHISA4-201ENST00000362011 XP32Q5T750 250 aa11.21□□□□□ -0.61
SHISA4-201ENST00000362011 A0A0U1RQV1 116 aa11.18□□□□□ -0.62
SHISA4-201ENST00000362011 FAM236AA0A1B0GUQ0 79 aa11.18□□□□□ -0.62
SHISA4-201ENST00000362011 FAM236BA0A1B0GV22 79 aa11.18□□□□□ -0.62
SHISA4-201ENST00000362011 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
SHISA4-201ENST00000362011 Q8N9P0 234 aaPredicted RBP11.18□□□□□ -0.62
SHISA4-201ENST00000362011 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
SHISA4-201ENST00000362011 NDUFS5O43920 106 aa11.17□□□□□ -0.62
SHISA4-201ENST00000362011 A8MUU9 505 aa11.16□□□□□ -0.62
SHISA4-201ENST00000362011 Q75L30 129 aa11.15□□□□□ -0.62
SHISA4-201ENST00000362011 FAT4Q6V0I7 4981 aa11.13□□□□□ -0.63
SHISA4-201ENST00000362011 SCGB1A1P11684 91 aa11.13□□□□□ -0.63
SHISA4-201ENST00000362011 RPL37P61927 97 aaKnown RBP11.11□□□□□ -0.63
SHISA4-201ENST00000362011 TP53AIP1Q9HCN2 124 aa11.08□□□□□ -0.64
SHISA4-201ENST00000362011 ATOX1O00244 68 aa11.06□□□□□ -0.64
SHISA4-201ENST00000362011 KRTAP9-6A0A140TA67 174 aa11.03□□□□□ -0.64
SHISA4-201ENST00000362011 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
SHISA4-201ENST00000362011 ATP11AUNQ6ZP68 121 aa11.02□□□□□ -0.65
SHISA4-201ENST00000362011 SMIM20Q8N5G0 67 aa11.02□□□□□ -0.65
SHISA4-201ENST00000362011 ZCCHC13Q8WW36 166 aaKnown RBP11.02□□□□□ -0.65
SHISA4-201ENST00000362011 MUC17Q685J3 4493 aa11.01□□□□□ -0.65
SHISA4-201ENST00000362011 UQCRQO14949 82 aa11.01□□□□□ -0.65
SHISA4-201ENST00000362011 TRAV7A0A075B6U4 112 aa10.97□□□□□ -0.65
SHISA4-201ENST00000362011 SEC61BP60468 96 aaKnown RBP10.97□□□□□ -0.65
SHISA4-201ENST00000362011 Q5W150 140 aa10.95□□□□□ -0.66
SHISA4-201ENST00000362011 PCOTHQ58A44 107 aa10.94□□□□□ -0.66
SHISA4-201ENST00000362011 TRAV22A0A0B4J277 110 aa10.93□□□□□ -0.66
SHISA4-201ENST00000362011 H0Y9P7 68 aa10.9□□□□□ -0.66
SHISA4-201ENST00000362011 SERP2Q8N6R1 65 aa10.89□□□□□ -0.67
SHISA4-201ENST00000362011 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
SHISA4-201ENST00000362011 MP68P56378 58 aa10.85□□□□□ -0.67
SHISA4-201ENST00000362011 ANAPC13Q9BS18 74 aa10.85□□□□□ -0.67
SHISA4-201ENST00000362011 H3BPC8 53 aa10.8□□□□□ -0.68
SHISA4-201ENST00000362011 COX7CP15954 63 aa10.8□□□□□ -0.68
SHISA4-201ENST00000362011 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
SHISA4-201ENST00000362011 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
SHISA4-201ENST00000362011 IGKV2D-30A0A075B6S6 120 aa10.78□□□□□ -0.68
SHISA4-201ENST00000362011 C7orf65Q6ZTY9 151 aa10.78□□□□□ -0.68
SHISA4-201ENST00000362011 LOC101927531A0A1B0GV80 90 aa10.77□□□□□ -0.69
SHISA4-201ENST00000362011 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.69
SHISA4-201ENST00000362011 SPINK7P58062 85 aa10.75□□□□□ -0.69
SHISA4-201ENST00000362011 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
SHISA4-201ENST00000362011 C20orf197Q8N268 126 aa10.71□□□□□ -0.69
SHISA4-201ENST00000362011 CYP4F30PQ9H0H9 118 aa10.7□□□□□ -0.7
SHISA4-201ENST00000362011 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
SHISA4-201ENST00000362011 SNURFQ9Y675 71 aa10.66□□□□□ -0.7
SHISA4-201ENST00000362011 KLKP1Q107X0 134 aa10.61□□□□□ -0.71
SHISA4-201ENST00000362011 CCDC179H3BU77 68 aa10.59□□□□□ -0.71
SHISA4-201ENST00000362011 HRES1P13985 223 aa10.59□□□□□ -0.71
SHISA4-201ENST00000362011 CRCT1Q9UGL9 99 aa10.57□□□□□ -0.72
SHISA4-201ENST00000362011 FSIP2Q5CZC0 6907 aa10.53□□□□□ -0.72
SHISA4-201ENST00000362011 RBM12B-AS1Q9P1G2 102 aa10.51□□□□□ -0.73
SHISA4-201ENST00000362011 NDUFC1O43677 76 aa10.5□□□□□ -0.73
SHISA4-201ENST00000362011 PCP4P48539 62 aa10.5□□□□□ -0.73
SHISA4-201ENST00000362011 C4orf26Q17RF5 130 aa10.5□□□□□ -0.73
SHISA4-201ENST00000362011 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
SHISA4-201ENST00000362011 CYSTM1Q9H1C7 97 aa10.48□□□□□ -0.73
SHISA4-201ENST00000362011 LCE2CQ5TA81 110 aa10.47□□□□□ -0.73
SHISA4-201ENST00000362011 COX6B2Q6YFQ2 88 aa10.44□□□□□ -0.74
SHISA4-201ENST00000362011 H7BZZ5 65 aa10.43□□□□□ -0.74
SHISA4-201ENST00000362011 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
SHISA4-201ENST00000362011 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
SHISA4-201ENST00000362011 KRTAP19-2Q3LHN2 52 aa10.4□□□□□ -0.74
SHISA4-201ENST00000362011 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
SHISA4-201ENST00000362011 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
SHISA4-201ENST00000362011 MT1HP80294 61 aa10.33□□□□□ -0.76
SHISA4-201ENST00000362011 A8MUN3 132 aa10.32□□□□□ -0.76
SHISA4-201ENST00000362011 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms