RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
TRAPPC4-201ENST00000359005 SPINK1P00995 79 aa6.32□□□□□ -1.4
TRAPPC4-201ENST00000359005 COX7CP15954 63 aa6.32□□□□□ -1.4
TRAPPC4-201ENST00000359005 PRR15Q8IV56 129 aa6.32□□□□□ -1.4
TRAPPC4-201ENST00000359005 K7EQZ3 153 aa6.31□□□□□ -1.4
TRAPPC4-201ENST00000359005 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
TRAPPC4-201ENST00000359005 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
TRAPPC4-201ENST00000359005 A0A087X002 238 aa6.3□□□□□ -1.4
TRAPPC4-201ENST00000359005 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
TRAPPC4-201ENST00000359005 Q8N9L7 120 aa6.3□□□□□ -1.4
TRAPPC4-201ENST00000359005 DEFB116Q30KQ4 102 aa6.29□□□□□ -1.4
TRAPPC4-201ENST00000359005 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
TRAPPC4-201ENST00000359005 OXTP01178 125 aa6.28□□□□□ -1.4
TRAPPC4-201ENST00000359005 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
TRAPPC4-201ENST00000359005 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
TRAPPC4-201ENST00000359005 LRP2P98164 4655 aa6.26□□□□□ -1.41
TRAPPC4-201ENST00000359005 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
TRAPPC4-201ENST00000359005 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
TRAPPC4-201ENST00000359005 Q96NJ1 140 aa6.25□□□□□ -1.41
TRAPPC4-201ENST00000359005 hDV103S1A0JD37 113 aa6.23□□□□□ -1.41
TRAPPC4-201ENST00000359005 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
TRAPPC4-201ENST00000359005 TP53AIP1Q9HCN2 124 aa6.23□□□□□ -1.41
TRAPPC4-201ENST00000359005 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
TRAPPC4-201ENST00000359005 C5orf47Q569G3 176 aa6.22□□□□□ -1.41
TRAPPC4-201ENST00000359005 WFDC13Q8IUB5 93 aa6.22□□□□□ -1.41
TRAPPC4-201ENST00000359005 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
TRAPPC4-201ENST00000359005 NDUFC1O43677 76 aa6.21□□□□□ -1.42
TRAPPC4-201ENST00000359005 OCR1Q9BZK8 76 aa6.21□□□□□ -1.42
TRAPPC4-201ENST00000359005 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.42
TRAPPC4-201ENST00000359005 MP68P56378 58 aa6.2□□□□□ -1.42
TRAPPC4-201ENST00000359005 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
TRAPPC4-201ENST00000359005 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
TRAPPC4-201ENST00000359005 H3BPC8 53 aa6.18□□□□□ -1.42
TRAPPC4-201ENST00000359005 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
TRAPPC4-201ENST00000359005 LINC00313P59037 77 aa6.17□□□□□ -1.42
TRAPPC4-201ENST00000359005 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
TRAPPC4-201ENST00000359005 C20orf197Q8N268 126 aa6.17□□□□□ -1.42
TRAPPC4-201ENST00000359005 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
TRAPPC4-201ENST00000359005 KRTAP10-8P60410 259 aa6.16□□□□□ -1.42
TRAPPC4-201ENST00000359005 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
TRAPPC4-201ENST00000359005 LPAP08519 4548 aa6.15□□□□□ -1.42
TRAPPC4-201ENST00000359005 NDUFS5O43920 106 aa6.15□□□□□ -1.42
TRAPPC4-201ENST00000359005 TMEM258P61165 79 aa6.13□□□□□ -1.43
TRAPPC4-201ENST00000359005 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
TRAPPC4-201ENST00000359005 H0Y9P7 68 aa6.1□□□□□ -1.43
TRAPPC4-201ENST00000359005 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC4-201ENST00000359005 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
TRAPPC4-201ENST00000359005 SNURFQ9Y675 71 aa6.07□□□□□ -1.44
TRAPPC4-201ENST00000359005 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC4-201ENST00000359005 C1orf64Q8NEQ6 169 aa6.05□□□□□ -1.44
TRAPPC4-201ENST00000359005 LINC00208Q96KT6 92 aa6.05□□□□□ -1.44
TRAPPC4-201ENST00000359005 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC4-201ENST00000359005 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
TRAPPC4-201ENST00000359005 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
TRAPPC4-201ENST00000359005 H7BZZ5 65 aa6.02□□□□□ -1.45
TRAPPC4-201ENST00000359005 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
TRAPPC4-201ENST00000359005 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
TRAPPC4-201ENST00000359005 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
TRAPPC4-201ENST00000359005 MUC2Q02817 5179 aa5.99□□□□□ -1.45
TRAPPC4-201ENST00000359005 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
TRAPPC4-201ENST00000359005 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
TRAPPC4-201ENST00000359005 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.46
TRAPPC4-201ENST00000359005 CYSTM1Q9H1C7 97 aa5.95□□□□□ -1.46
TRAPPC4-201ENST00000359005 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
TRAPPC4-201ENST00000359005 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
TRAPPC4-201ENST00000359005 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
TRAPPC4-201ENST00000359005 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
TRAPPC4-201ENST00000359005 C9orf92A6NGG3 77 aa5.92□□□□□ -1.46
TRAPPC4-201ENST00000359005 A8MUU9 505 aa5.92□□□□□ -1.46
TRAPPC4-201ENST00000359005 Q5W150 140 aa5.9□□□□□ -1.46
TRAPPC4-201ENST00000359005 Q75L30 129 aa5.9□□□□□ -1.46
TRAPPC4-201ENST00000359005 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
TRAPPC4-201ENST00000359005 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
TRAPPC4-201ENST00000359005 IGKV2-30P06310 120 aa5.88□□□□□ -1.47
TRAPPC4-201ENST00000359005 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
TRAPPC4-201ENST00000359005 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
TRAPPC4-201ENST00000359005 C7orf65Q6ZTY9 151 aa5.87□□□□□ -1.47
TRAPPC4-201ENST00000359005 PRR4Q16378 134 aa5.86□□□□□ -1.47
TRAPPC4-201ENST00000359005 PCOTHQ58A44 107 aa5.86□□□□□ -1.47
TRAPPC4-201ENST00000359005 IGKV2D-30A0A075B6S6 120 aa5.84□□□□□ -1.47
TRAPPC4-201ENST00000359005 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
TRAPPC4-201ENST00000359005 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
TRAPPC4-201ENST00000359005 ACYP2P14621 99 aa5.81□□□□□ -1.48
TRAPPC4-201ENST00000359005 SMIM26A0A096LP01 95 aa5.8□□□□□ -1.48
TRAPPC4-201ENST00000359005 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
TRAPPC4-201ENST00000359005 A8MUN3 132 aa5.78□□□□□ -1.48
TRAPPC4-201ENST00000359005 HRES1P13985 223 aa5.78□□□□□ -1.48
TRAPPC4-201ENST00000359005 XP32Q5T750 250 aa5.77□□□□□ -1.49
TRAPPC4-201ENST00000359005 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
TRAPPC4-201ENST00000359005 V9GYY9 64 aa5.75□□□□□ -1.49
TRAPPC4-201ENST00000359005 SPINK7P58062 85 aa5.74□□□□□ -1.49
TRAPPC4-201ENST00000359005 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
TRAPPC4-201ENST00000359005 COA5Q86WW8 74 aa5.72□□□□□ -1.49
TRAPPC4-201ENST00000359005 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
TRAPPC4-201ENST00000359005 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
TRAPPC4-201ENST00000359005 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
TRAPPC4-201ENST00000359005 Q1T7F1 81 aa5.64□□□□□ -1.51
TRAPPC4-201ENST00000359005 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
TRAPPC4-201ENST00000359005 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC4-201ENST00000359005 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms