RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 Q6ZVQ6 151 aa8.41□□□□□ -1.06
TPM1-206ENST00000358278 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
TPM1-206ENST00000358278 J3QR89 54 aa8.39□□□□□ -1.07
TPM1-206ENST00000358278 ACYP1P07311 99 aa8.37□□□□□ -1.07
TPM1-206ENST00000358278 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
TPM1-206ENST00000358278 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
TPM1-206ENST00000358278 BPY2O14599 106 aa8.37□□□□□ -1.07
TPM1-206ENST00000358278 NDUFB1O75438 58 aa8.37□□□□□ -1.07
TPM1-206ENST00000358278 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
TPM1-206ENST00000358278 A8MWP4 228 aa8.34□□□□□ -1.07
TPM1-206ENST00000358278 DSCR10P59022 87 aa8.34□□□□□ -1.07
TPM1-206ENST00000358278 XP32Q5T750 250 aa8.34□□□□□ -1.07
TPM1-206ENST00000358278 LINC00313P59037 77 aa8.32□□□□□ -1.08
TPM1-206ENST00000358278 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
TPM1-206ENST00000358278 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
TPM1-206ENST00000358278 K7EQZ3 153 aa8.29□□□□□ -1.08
TPM1-206ENST00000358278 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
TPM1-206ENST00000358278 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
TPM1-206ENST00000358278 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
TPM1-206ENST00000358278 Q8N9L7 120 aa8.26□□□□□ -1.09
TPM1-206ENST00000358278 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
TPM1-206ENST00000358278 CXCL6P80162 114 aa8.25□□□□□ -1.09
TPM1-206ENST00000358278 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
TPM1-206ENST00000358278 RPL37P61927 97 aaKnown RBP8.23□□□□□ -1.09
TPM1-206ENST00000358278 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
TPM1-206ENST00000358278 SEC61BP60468 96 aaKnown RBP8.22□□□□□ -1.09
TPM1-206ENST00000358278 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.09
TPM1-206ENST00000358278 Q75L30 129 aa8.21□□□□□ -1.09
TPM1-206ENST00000358278 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
TPM1-206ENST00000358278 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
TPM1-206ENST00000358278 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
TPM1-206ENST00000358278 A8MUU9 505 aa8.18□□□□□ -1.1
TPM1-206ENST00000358278 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
TPM1-206ENST00000358278 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
TPM1-206ENST00000358278 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
TPM1-206ENST00000358278 TMEM254Q8TBM7 123 aa8.16□□□□□ -1.1
TPM1-206ENST00000358278 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
TPM1-206ENST00000358278 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.1
TPM1-206ENST00000358278 CASC2Q6XLA1 102 aa8.15□□□□□ -1.11
TPM1-206ENST00000358278 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.11
TPM1-206ENST00000358278 HCG22E2RYF7 251 aa8.14□□□□□ -1.11
TPM1-206ENST00000358278 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
TPM1-206ENST00000358278 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
TPM1-206ENST00000358278 NDUFS5O43920 106 aa8.11□□□□□ -1.11
TPM1-206ENST00000358278 H3BS24 57 aa8.09□□□□□ -1.11
TPM1-206ENST00000358278 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
TPM1-206ENST00000358278 MUC2Q02817 5179 aa8.06□□□□□ -1.12
TPM1-206ENST00000358278 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
TPM1-206ENST00000358278 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
TPM1-206ENST00000358278 A0A087WVE0 104 aa8.05□□□□□ -1.12
TPM1-206ENST00000358278 PCP4P48539 62 aa8.05□□□□□ -1.12
TPM1-206ENST00000358278 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
TPM1-206ENST00000358278 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
TPM1-206ENST00000358278 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
TPM1-206ENST00000358278 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
TPM1-206ENST00000358278 Q5W150 140 aa7.92□□□□□ -1.14
TPM1-206ENST00000358278 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
TPM1-206ENST00000358278 SPINK7P58062 85 aa7.88□□□□□ -1.15
TPM1-206ENST00000358278 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
TPM1-206ENST00000358278 FAM236AA0A1B0GUQ0 79 aa7.86□□□□□ -1.15
TPM1-206ENST00000358278 FAM236BA0A1B0GV22 79 aa7.86□□□□□ -1.15
TPM1-206ENST00000358278 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
TPM1-206ENST00000358278 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
TPM1-206ENST00000358278 UQCRQO14949 82 aa7.84□□□□□ -1.15
TPM1-206ENST00000358278 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
TPM1-206ENST00000358278 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
TPM1-206ENST00000358278 ANAPC13Q9BS18 74 aa7.81□□□□□ -1.16
TPM1-206ENST00000358278 HRES1P13985 223 aa7.8□□□□□ -1.16
TPM1-206ENST00000358278 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
TPM1-206ENST00000358278 FAT4Q6V0I7 4981 aa7.79□□□□□ -1.16
TPM1-206ENST00000358278 H0Y9P7 68 aa7.79□□□□□ -1.16
TPM1-206ENST00000358278 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
TPM1-206ENST00000358278 ATOX1O00244 68 aa7.78□□□□□ -1.16
TPM1-206ENST00000358278 FAM236DA0A1B0GTK5 79 aa7.75□□□□□ -1.17
TPM1-206ENST00000358278 FAM236CP0DP71 79 aa7.75□□□□□ -1.17
TPM1-206ENST00000358278 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
TPM1-206ENST00000358278 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
TPM1-206ENST00000358278 MP68P56378 58 aa7.74□□□□□ -1.17
TPM1-206ENST00000358278 SMIM20Q8N5G0 67 aa7.74□□□□□ -1.17
TPM1-206ENST00000358278 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
TPM1-206ENST00000358278 C5orf47Q569G3 176 aa7.72□□□□□ -1.17
TPM1-206ENST00000358278 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
TPM1-206ENST00000358278 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
TPM1-206ENST00000358278 CYP4F30PQ9H0H9 118 aa7.7□□□□□ -1.18
TPM1-206ENST00000358278 TRAV7A0A075B6U4 112 aa7.69□□□□□ -1.18
TPM1-206ENST00000358278 H3BPC8 53 aa7.66□□□□□ -1.18
TPM1-206ENST00000358278 C4orf26Q17RF5 130 aa7.66□□□□□ -1.18
TPM1-206ENST00000358278 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.18
TPM1-206ENST00000358278 CCDC179H3BU77 68 aa7.62□□□□□ -1.19
TPM1-206ENST00000358278 COX7CP15954 63 aa7.61□□□□□ -1.19
TPM1-206ENST00000358278 MT1HP80294 61 aa7.61□□□□□ -1.19
TPM1-206ENST00000358278 SERP2Q8N6R1 65 aa7.61□□□□□ -1.19
TPM1-206ENST00000358278 SVIPQ8NHG7 77 aa7.59□□□□□ -1.19
TPM1-206ENST00000358278 M0R2T5 61 aa7.57□□□□□ -1.2
TPM1-206ENST00000358278 KLKP1Q107X0 134 aa7.57□□□□□ -1.2
TPM1-206ENST00000358278 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
TPM1-206ENST00000358278 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
TPM1-206ENST00000358278 SNURFQ9Y675 71 aa7.53□□□□□ -1.2
TPM1-206ENST00000358278 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
TPM1-206ENST00000358278 A8MUN3 132 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms