RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ANAPC11Q9NYG5 84 aa8.79□□□□□ -1
CXCL12-201ENST00000343575 IGLV8-61A0A075B6I0 122 aa8.77□□□□□ -1.01
CXCL12-201ENST00000343575 SPANXA2-OT1Q8N9U9 137 aa8.77□□□□□ -1.01
CXCL12-201ENST00000343575 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
CXCL12-201ENST00000343575 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
CXCL12-201ENST00000343575 TRAV22A0A0B4J277 110 aa8.74□□□□□ -1.01
CXCL12-201ENST00000343575 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CXCL12-201ENST00000343575 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
CXCL12-201ENST00000343575 PMAIP1Q13794 54 aa8.7□□□□□ -1.02
CXCL12-201ENST00000343575 Q5VSD8 79 aa8.7□□□□□ -1.02
CXCL12-201ENST00000343575 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
CXCL12-201ENST00000343575 SEC61GP60059 68 aa8.7□□□□□ -1.02
CXCL12-201ENST00000343575 A0A087X002 238 aa8.69□□□□□ -1.02
CXCL12-201ENST00000343575 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
CXCL12-201ENST00000343575 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
CXCL12-201ENST00000343575 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
CXCL12-201ENST00000343575 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
CXCL12-201ENST00000343575 IGLV9-49A0A0B4J1Y8 123 aa8.68□□□□□ -1.02
CXCL12-201ENST00000343575 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
CXCL12-201ENST00000343575 KRTAP13-2Q52LG2 175 aa8.66□□□□□ -1.02
CXCL12-201ENST00000343575 Q8N1X5 172 aa8.66□□□□□ -1.02
CXCL12-201ENST00000343575 PSPHP1O15172 72 aa8.66□□□□□ -1.02
CXCL12-201ENST00000343575 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
CXCL12-201ENST00000343575 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.02
CXCL12-201ENST00000343575 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
CXCL12-201ENST00000343575 A0A087WSZ3 146 aa8.64□□□□□ -1.03
CXCL12-201ENST00000343575 H0Y9P7 68 aa8.64□□□□□ -1.03
CXCL12-201ENST00000343575 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
CXCL12-201ENST00000343575 MOBPQ13875 183 aa8.64□□□□□ -1.03
CXCL12-201ENST00000343575 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
CXCL12-201ENST00000343575 A8MWP4 228 aa8.62□□□□□ -1.03
CXCL12-201ENST00000343575 A8MUN3 132 aa8.62□□□□□ -1.03
CXCL12-201ENST00000343575 PRR4Q16378 134 aa8.61□□□□□ -1.03
CXCL12-201ENST00000343575 Q5VV11 94 aa8.6□□□□□ -1.03
CXCL12-201ENST00000343575 Q8N9P0 234 aaPredicted RBP8.6□□□□□ -1.03
CXCL12-201ENST00000343575 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
CXCL12-201ENST00000343575 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
CXCL12-201ENST00000343575 SSBP3-AS1Q7Z2R9 100 aa8.57□□□□□ -1.04
CXCL12-201ENST00000343575 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
CXCL12-201ENST00000343575 DEFB116Q30KQ4 102 aa8.56□□□□□ -1.04
CXCL12-201ENST00000343575 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
CXCL12-201ENST00000343575 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
CXCL12-201ENST00000343575 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
CXCL12-201ENST00000343575 Q75L30 129 aa8.55□□□□□ -1.04
CXCL12-201ENST00000343575 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
CXCL12-201ENST00000343575 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
CXCL12-201ENST00000343575 CHKB-CPT1BH3BT56 60 aa8.54□□□□□ -1.04
CXCL12-201ENST00000343575 HERC2O95714 4834 aa8.52□□□□□ -1.05
CXCL12-201ENST00000343575 CD164Q04900 197 aa8.51□□□□□ -1.05
CXCL12-201ENST00000343575 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
CXCL12-201ENST00000343575 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
CXCL12-201ENST00000343575 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
CXCL12-201ENST00000343575 COA5Q86WW8 74 aa8.49□□□□□ -1.05
CXCL12-201ENST00000343575 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
CXCL12-201ENST00000343575 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
CXCL12-201ENST00000343575 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
CXCL12-201ENST00000343575 NDUFS5O43920 106 aa8.46□□□□□ -1.06
CXCL12-201ENST00000343575 KRTAP10-8P60410 259 aa8.46□□□□□ -1.06
CXCL12-201ENST00000343575 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
CXCL12-201ENST00000343575 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.06
CXCL12-201ENST00000343575 TNXBP22105 4242 aa8.45□□□□□ -1.06
CXCL12-201ENST00000343575 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
CXCL12-201ENST00000343575 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
CXCL12-201ENST00000343575 A6NED7 52 aa8.43□□□□□ -1.06
CXCL12-201ENST00000343575 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
CXCL12-201ENST00000343575 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
CXCL12-201ENST00000343575 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
CXCL12-201ENST00000343575 Q96NJ1 140 aa8.42□□□□□ -1.06
CXCL12-201ENST00000343575 SPINK1P00995 79 aa8.38□□□□□ -1.07
CXCL12-201ENST00000343575 LCA10Q71F78 164 aa8.38□□□□□ -1.07
CXCL12-201ENST00000343575 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
CXCL12-201ENST00000343575 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
CXCL12-201ENST00000343575 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
CXCL12-201ENST00000343575 SPTSSBQ8NFR3 76 aa8.36□□□□□ -1.07
CXCL12-201ENST00000343575 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
CXCL12-201ENST00000343575 A6NN06 94 aa8.34□□□□□ -1.07
CXCL12-201ENST00000343575 A8MU10 97 aa8.34□□□□□ -1.07
CXCL12-201ENST00000343575 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
CXCL12-201ENST00000343575 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
CXCL12-201ENST00000343575 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
CXCL12-201ENST00000343575 MRPL34Q9BQ48 92 aaKnown RBP8.3□□□□□ -1.08
CXCL12-201ENST00000343575 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
CXCL12-201ENST00000343575 HRES1P13985 223 aa8.28□□□□□ -1.08
CXCL12-201ENST00000343575 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
CXCL12-201ENST00000343575 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
CXCL12-201ENST00000343575 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
CXCL12-201ENST00000343575 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
CXCL12-201ENST00000343575 ACYP2P14621 99 aa8.2□□□□□ -1.1
CXCL12-201ENST00000343575 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
CXCL12-201ENST00000343575 SPINK7P58062 85 aa8.18□□□□□ -1.1
CXCL12-201ENST00000343575 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
CXCL12-201ENST00000343575 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.11
CXCL12-201ENST00000343575 J3QL48 77 aa8.13□□□□□ -1.11
CXCL12-201ENST00000343575 DMAC1Q96GE9 116 aa8.11□□□□□ -1.11
CXCL12-201ENST00000343575 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
CXCL12-201ENST00000343575 LINC00313P59037 77 aa8.08□□□□□ -1.12
CXCL12-201ENST00000343575 Q5W150 140 aa8.06□□□□□ -1.12
CXCL12-201ENST00000343575 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
CXCL12-201ENST00000343575 A0A1B0GU69 56 aa8.02□□□□□ -1.12
CXCL12-201ENST00000343575 SPATA8Q6RVD6 105 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms