RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 KLKP1Q107X0 134 aa11.54□□□□□ -0.56
RTN1-202ENST00000342503 Q5XG85 94 aa11.54□□□□□ -0.56
RTN1-202ENST00000342503 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
RTN1-202ENST00000342503 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
RTN1-202ENST00000342503 hDV103S1A0JD37 113 aa11.52□□□□□ -0.56
RTN1-202ENST00000342503 PKHD1L1Q86WI1 4243 aa11.5□□□□□ -0.57
RTN1-202ENST00000342503 A0A0U1RQV1 116 aa11.49□□□□□ -0.57
RTN1-202ENST00000342503 LIMD2Q9BT23 127 aa11.49□□□□□ -0.57
RTN1-202ENST00000342503 C1orf195Q5TG92 126 aa11.48□□□□□ -0.57
RTN1-202ENST00000342503 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
RTN1-202ENST00000342503 SPINK1P00995 79 aa11.45□□□□□ -0.58
RTN1-202ENST00000342503 C5orf47Q569G3 176 aa11.45□□□□□ -0.58
RTN1-202ENST00000342503 TMEM258P61165 79 aa11.44□□□□□ -0.58
RTN1-202ENST00000342503 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
RTN1-202ENST00000342503 FAM229AH3BQW9 127 aa11.43□□□□□ -0.58
RTN1-202ENST00000342503 H7BZZ5 65 aa11.43□□□□□ -0.58
RTN1-202ENST00000342503 LCE2CQ5TA81 110 aa11.41□□□□□ -0.58
RTN1-202ENST00000342503 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.58
RTN1-202ENST00000342503 NDUFC1O43677 76 aa11.39□□□□□ -0.59
RTN1-202ENST00000342503 HSPG2P98160 4391 aa11.39□□□□□ -0.59
RTN1-202ENST00000342503 SPAG11AQ6PDA7 123 aa11.38□□□□□ -0.59
RTN1-202ENST00000342503 C8orf87E5RJ46 101 aa11.38□□□□□ -0.59
RTN1-202ENST00000342503 RYR1P21817 5038 aa11.37□□□□□ -0.59
RTN1-202ENST00000342503 RPS29P62273 56 aaKnown RBP11.36□□□□□ -0.59
RTN1-202ENST00000342503 Q5VSD8 79 aa11.36□□□□□ -0.59
RTN1-202ENST00000342503 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
RTN1-202ENST00000342503 H0Y9P7 68 aa11.35□□□□□ -0.59
RTN1-202ENST00000342503 MP68P56378 58 aa11.35□□□□□ -0.59
RTN1-202ENST00000342503 NDUFS5O43920 106 aa11.35□□□□□ -0.59
RTN1-202ENST00000342503 TP53AIP1Q9HCN2 124 aa11.34□□□□□ -0.59
RTN1-202ENST00000342503 LINC00313P59037 77 aa11.32□□□□□ -0.6
RTN1-202ENST00000342503 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
RTN1-202ENST00000342503 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
RTN1-202ENST00000342503 LINC00208Q96KT6 92 aa11.3□□□□□ -0.6
RTN1-202ENST00000342503 TRAV22A0A0B4J277 110 aa11.29□□□□□ -0.6
RTN1-202ENST00000342503 H3BPC8 53 aa11.27□□□□□ -0.61
RTN1-202ENST00000342503 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
RTN1-202ENST00000342503 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
RTN1-202ENST00000342503 KRTAP16-1A8MUX0 517 aa11.22□□□□□ -0.61
RTN1-202ENST00000342503 EPPK1P58107 5090 aaKnown RBP11.2□□□□□ -0.62
RTN1-202ENST00000342503 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
RTN1-202ENST00000342503 ATP5EP56381 51 aaPredicted RBP11.18□□□□□ -0.62
RTN1-202ENST00000342503 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
RTN1-202ENST00000342503 KRTAP10-8P60410 259 aa11.17□□□□□ -0.62
RTN1-202ENST00000342503 Q5W150 140 aa11.17□□□□□ -0.62
RTN1-202ENST00000342503 RPS28P62857 69 aaKnown RBP11.15□□□□□ -0.62
RTN1-202ENST00000342503 TNXBP22105 4242 aa11.15□□□□□ -0.62
RTN1-202ENST00000342503 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.63
RTN1-202ENST00000342503 Q8N1X5 172 aa11.15□□□□□ -0.63
RTN1-202ENST00000342503 KRTAP13-3Q3SY46 172 aa11.14□□□□□ -0.63
RTN1-202ENST00000342503 LRP1Q07954 4544 aaKnown RBP11.14□□□□□ -0.63
RTN1-202ENST00000342503 FAT3Q8TDW7 4589 aa11.12□□□□□ -0.63
RTN1-202ENST00000342503 RETNLBQ9BQ08 111 aa11.1□□□□□ -0.63
RTN1-202ENST00000342503 SERP1Q9Y6X1 66 aa11.1□□□□□ -0.63
RTN1-202ENST00000342503 OXTP01178 125 aa11.09□□□□□ -0.63
RTN1-202ENST00000342503 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
RTN1-202ENST00000342503 FLG2Q5D862 2391 aaPredicted RBP11.05□□□□□ -0.64
RTN1-202ENST00000342503 PRR4Q16378 134 aa11.05□□□□□ -0.64
RTN1-202ENST00000342503 LOC101927531A0A1B0GV80 90 aa11.04□□□□□ -0.64
RTN1-202ENST00000342503 SPANXA2-OT1Q8N9U9 137 aa11.03□□□□□ -0.64
RTN1-202ENST00000342503 C9orf92A6NGG3 77 aa11.02□□□□□ -0.65
RTN1-202ENST00000342503 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
RTN1-202ENST00000342503 MT1HL1P0DM35 61 aa10.96□□□□□ -0.65
RTN1-202ENST00000342503 IGLV7-46A0A075B6I9 117 aa10.95□□□□□ -0.66
RTN1-202ENST00000342503 IGKV2-30P06310 120 aa10.93□□□□□ -0.66
RTN1-202ENST00000342503 A8MUU9 505 aa10.91□□□□□ -0.66
RTN1-202ENST00000342503 C20orf166-AS1Q96NR2 134 aa10.91□□□□□ -0.66
RTN1-202ENST00000342503 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
RTN1-202ENST00000342503 KRTAP4-5Q9BYR2 181 aa10.88□□□□□ -0.67
RTN1-202ENST00000342503 FP248Q71RG6 208 aaPredicted RBP10.87□□□□□ -0.67
RTN1-202ENST00000342503 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
RTN1-202ENST00000342503 SMIM26A0A096LP01 95 aa10.84□□□□□ -0.67
RTN1-202ENST00000342503 HRES1P13985 223 aa10.83□□□□□ -0.68
RTN1-202ENST00000342503 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
RTN1-202ENST00000342503 Q75L30 129 aa10.77□□□□□ -0.69
RTN1-202ENST00000342503 C7orf65Q6ZTY9 151 aa10.75□□□□□ -0.69
RTN1-202ENST00000342503 COA5Q86WW8 74 aa10.75□□□□□ -0.69
RTN1-202ENST00000342503 BIRC6Q9NR09 4857 aa10.71□□□□□ -0.7
RTN1-202ENST00000342503 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
RTN1-202ENST00000342503 XP32Q5T750 250 aa10.67□□□□□ -0.7
RTN1-202ENST00000342503 MPLKIPQ8TAP9 179 aa10.67□□□□□ -0.7
RTN1-202ENST00000342503 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
RTN1-202ENST00000342503 ABCA13Q86UQ4 5058 aa10.65□□□□□ -0.7
RTN1-202ENST00000342503 LOC100996750A0A140TA64 210 aa10.64□□□□□ -0.71
RTN1-202ENST00000342503 ACYP2P14621 99 aa10.64□□□□□ -0.71
RTN1-202ENST00000342503 KRTAP4-6Q9BYQ5 205 aa10.64□□□□□ -0.71
RTN1-202ENST00000342503 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
RTN1-202ENST00000342503 HERC2O95714 4834 aa10.63□□□□□ -0.71
RTN1-202ENST00000342503 ATP11AUNQ6ZP68 121 aa10.61□□□□□ -0.71
RTN1-202ENST00000342503 SPINK7P58062 85 aa10.6□□□□□ -0.71
RTN1-202ENST00000342503 Q1T7F1 81 aa10.58□□□□□ -0.72
RTN1-202ENST00000342503 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
RTN1-202ENST00000342503 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
RTN1-202ENST00000342503 V9GYY9 64 aa10.49□□□□□ -0.73
RTN1-202ENST00000342503 A8MUN3 132 aa10.46□□□□□ -0.74
RTN1-202ENST00000342503 KRTAP3-1Q9BYR8 98 aa10.42□□□□□ -0.74
RTN1-202ENST00000342503 PSPHP1O15172 72 aa10.41□□□□□ -0.74
RTN1-202ENST00000342503 LPAP08519 4548 aa10.38□□□□□ -0.75
RTN1-202ENST00000342503 LINC01558Q9Y6Z2 57 aa10.38□□□□□ -0.75
RTN1-202ENST00000342503 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms