RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 KRTAP10-2P60368 255 aa9.03□□□□□ -0.96
PBX3-201ENST00000342287 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.96
PBX3-201ENST00000342287 PRLHP81277 87 aa9.01□□□□□ -0.97
PBX3-201ENST00000342287 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
PBX3-201ENST00000342287 A0A1B0GW54 56 aa9□□□□□ -0.97
PBX3-201ENST00000342287 H0Y9J4 135 aa9□□□□□ -0.97
PBX3-201ENST00000342287 FRAS1Q86XX4 4008 aa8.98□□□□□ -0.97
PBX3-201ENST00000342287 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
PBX3-201ENST00000342287 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.97
PBX3-201ENST00000342287 PCOTHQ58A44 107 aa8.96□□□□□ -0.97
PBX3-201ENST00000342287 HYDINQ4G0P3 5121 aa8.96□□□□□ -0.97
PBX3-201ENST00000342287 H3BPC8 53 aa8.95□□□□□ -0.98
PBX3-201ENST00000342287 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
PBX3-201ENST00000342287 A0A0G2JQZ4 141 aa8.95□□□□□ -0.98
PBX3-201ENST00000342287 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
PBX3-201ENST00000342287 ZNF706Q9Y5V0 76 aaPredicted RBP8.95□□□□□ -0.98
PBX3-201ENST00000342287 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
PBX3-201ENST00000342287 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
PBX3-201ENST00000342287 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
PBX3-201ENST00000342287 FAT2Q9NYQ8 4349 aa8.91□□□□□ -0.98
PBX3-201ENST00000342287 Q6ZSA8 131 aa8.9□□□□□ -0.98
PBX3-201ENST00000342287 CIRBP-AS1Q8TBR5 109 aa8.9□□□□□ -0.98
PBX3-201ENST00000342287 DNAH11Q96DT5 4516 aa8.9□□□□□ -0.98
PBX3-201ENST00000342287 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
PBX3-201ENST00000342287 SACSQ9NZJ4 4579 aa8.89□□□□□ -0.99
PBX3-201ENST00000342287 CSAG1Q6PB30 78 aa8.88□□□□□ -0.99
PBX3-201ENST00000342287 PKD1P98161 4303 aa8.87□□□□□ -0.99
PBX3-201ENST00000342287 A0A0A0MQY5 61 aa8.85□□□□□ -0.99
PBX3-201ENST00000342287 SPRR1BP22528 89 aa8.85□□□□□ -0.99
PBX3-201ENST00000342287 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
PBX3-201ENST00000342287 A0A087WSZ3 146 aa8.84□□□□□ -0.99
PBX3-201ENST00000342287 ZNF861PO60384 105 aa8.84□□□□□ -0.99
PBX3-201ENST00000342287 HRES1P13985 223 aa8.83□□□□□ -1
PBX3-201ENST00000342287 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
PBX3-201ENST00000342287 IGLV7-43P04211 117 aa8.81□□□□□ -1
PBX3-201ENST00000342287 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
PBX3-201ENST00000342287 A0A1B0GVY2 172 aa8.8□□□□□ -1
PBX3-201ENST00000342287 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
PBX3-201ENST00000342287 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
PBX3-201ENST00000342287 IGFL1Q6UW32 110 aa8.77□□□□□ -1.01
PBX3-201ENST00000342287 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
PBX3-201ENST00000342287 RYR2Q92736 4967 aa8.71□□□□□ -1.02
PBX3-201ENST00000342287 KMT2CQ8NEZ4 4911 aaKnown RBP8.7□□□□□ -1.02
PBX3-201ENST00000342287 IGLV9-49A0A0B4J1Y8 123 aa8.69□□□□□ -1.02
PBX3-201ENST00000342287 A8MWP4 228 aa8.69□□□□□ -1.02
PBX3-201ENST00000342287 ANAPC11Q9NYG5 84 aa8.68□□□□□ -1.02
PBX3-201ENST00000342287 PKHD1P08F94 4074 aa8.67□□□□□ -1.02
PBX3-201ENST00000342287 A0A087X002 238 aa8.67□□□□□ -1.02
PBX3-201ENST00000342287 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
PBX3-201ENST00000342287 SPATA8Q6RVD6 105 aa8.64□□□□□ -1.03
PBX3-201ENST00000342287 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
PBX3-201ENST00000342287 ROMO1P60602 79 aa8.63□□□□□ -1.03
PBX3-201ENST00000342287 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
PBX3-201ENST00000342287 A0A1B0GU69 56 aa8.62□□□□□ -1.03
PBX3-201ENST00000342287 MIR22HGQ0VDD5 57 aa8.62□□□□□ -1.03
PBX3-201ENST00000342287 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
PBX3-201ENST00000342287 LINC00472Q9H8W2 130 aa8.59□□□□□ -1.03
PBX3-201ENST00000342287 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
PBX3-201ENST00000342287 TP53AIP1Q9HCN2 124 aa8.57□□□□□ -1.04
PBX3-201ENST00000342287 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
PBX3-201ENST00000342287 SPINK6Q6UWN8 80 aa8.56□□□□□ -1.04
PBX3-201ENST00000342287 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
PBX3-201ENST00000342287 UQCR11O14957 56 aa8.55□□□□□ -1.04
PBX3-201ENST00000342287 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
PBX3-201ENST00000342287 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
PBX3-201ENST00000342287 ACYP2P14621 99 aa8.5□□□□□ -1.05
PBX3-201ENST00000342287 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
PBX3-201ENST00000342287 KRTAP10-4P60372 401 aaPredicted RBP8.49□□□□□ -1.05
PBX3-201ENST00000342287 RYR3Q15413 4870 aa8.48□□□□□ -1.05
PBX3-201ENST00000342287 CDK2AP2O75956 126 aa8.45□□□□□ -1.06
PBX3-201ENST00000342287 C8orf17Q9NRJ1 99 aa8.45□□□□□ -1.06
PBX3-201ENST00000342287 Q96NJ1 140 aa8.44□□□□□ -1.06
PBX3-201ENST00000342287 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
PBX3-201ENST00000342287 P0C880 135 aa8.44□□□□□ -1.06
PBX3-201ENST00000342287 KRTAP25-1Q3LHN0 102 aa8.44□□□□□ -1.06
PBX3-201ENST00000342287 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
PBX3-201ENST00000342287 FAT1Q14517 4588 aa8.39□□□□□ -1.07
PBX3-201ENST00000342287 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
PBX3-201ENST00000342287 Q5VSD8 79 aa8.35□□□□□ -1.07
PBX3-201ENST00000342287 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
PBX3-201ENST00000342287 SPINK1P00995 79 aa8.34□□□□□ -1.07
PBX3-201ENST00000342287 Q5W150 140 aa8.34□□□□□ -1.07
PBX3-201ENST00000342287 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
PBX3-201ENST00000342287 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
PBX3-201ENST00000342287 A8MUU9 505 aa8.32□□□□□ -1.08
PBX3-201ENST00000342287 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
PBX3-201ENST00000342287 A0A1B0GVX0 72 aa8.31□□□□□ -1.08
PBX3-201ENST00000342287 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
PBX3-201ENST00000342287 HSPG2P98160 4391 aa8.29□□□□□ -1.08
PBX3-201ENST00000342287 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
PBX3-201ENST00000342287 Q8N1X5 172 aa8.24□□□□□ -1.09
PBX3-201ENST00000342287 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
PBX3-201ENST00000342287 RYR1P21817 5038 aa8.22□□□□□ -1.09
PBX3-201ENST00000342287 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.09
PBX3-201ENST00000342287 KRTAP13-3Q3SY46 172 aa8.2□□□□□ -1.1
PBX3-201ENST00000342287 NDUFAF8A1L188 74 aa8.18□□□□□ -1.1
PBX3-201ENST00000342287 KRTAP10-8P60410 259 aa8.18□□□□□ -1.1
PBX3-201ENST00000342287 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
PBX3-201ENST00000342287 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
PBX3-201ENST00000342287 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms