RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 RPS29P62273 56 aaKnown RBP11.72□□□□□ -0.53
CLDND1-201ENST00000341181 RETNLBQ9BQ08 111 aa11.71□□□□□ -0.54
CLDND1-201ENST00000341181 LIMD2Q9BT23 127 aa11.71□□□□□ -0.54
CLDND1-201ENST00000341181 Q5XG85 94 aa11.7□□□□□ -0.54
CLDND1-201ENST00000341181 Q96NJ1 140 aa11.69□□□□□ -0.54
CLDND1-201ENST00000341181 SS18L2Q9UHA2 77 aa11.69□□□□□ -0.54
CLDND1-201ENST00000341181 C1orf195Q5TG92 126 aa11.65□□□□□ -0.54
CLDND1-201ENST00000341181 ASB16-AS1Q495Z4 193 aa11.64□□□□□ -0.55
CLDND1-201ENST00000341181 COX7CP15954 63 aa11.62□□□□□ -0.55
CLDND1-201ENST00000341181 SERP2Q8N6R1 65 aa11.61□□□□□ -0.55
CLDND1-201ENST00000341181 UQCRQO14949 82 aa11.57□□□□□ -0.56
CLDND1-201ENST00000341181 CYSTM1Q9H1C7 97 aa11.57□□□□□ -0.56
CLDND1-201ENST00000341181 A8MWP4 228 aa11.57□□□□□ -0.56
CLDND1-201ENST00000341181 WFDC13Q8IUB5 93 aa11.57□□□□□ -0.56
CLDND1-201ENST00000341181 PRR15Q8IV56 129 aa11.56□□□□□ -0.56
CLDND1-201ENST00000341181 HCG22E2RYF7 251 aa11.54□□□□□ -0.56
CLDND1-201ENST00000341181 OCR1Q9BZK8 76 aa11.51□□□□□ -0.57
CLDND1-201ENST00000341181 TRAV7A0A075B6U4 112 aa11.51□□□□□ -0.57
CLDND1-201ENST00000341181 LPAP08519 4548 aa11.5□□□□□ -0.57
CLDND1-201ENST00000341181 J3KT08 172 aa11.49□□□□□ -0.57
CLDND1-201ENST00000341181 NOTCH2NLQ7Z3S9 236 aa11.48□□□□□ -0.57
CLDND1-201ENST00000341181 C20orf197Q8N268 126 aa11.47□□□□□ -0.57
CLDND1-201ENST00000341181 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
CLDND1-201ENST00000341181 PRR4Q16378 134 aa11.47□□□□□ -0.57
CLDND1-201ENST00000341181 HMCN2Q8NDA2 5059 aa11.46□□□□□ -0.57
CLDND1-201ENST00000341181 MMP24-AS1A0A0U1RRL7 71 aa11.45□□□□□ -0.58
CLDND1-201ENST00000341181 NDUFB1O75438 58 aa11.44□□□□□ -0.58
CLDND1-201ENST00000341181 CASC2Q6XLA1 102 aa11.44□□□□□ -0.58
CLDND1-201ENST00000341181 SMIM20Q8N5G0 67 aa11.43□□□□□ -0.58
CLDND1-201ENST00000341181 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
CLDND1-201ENST00000341181 SNURFQ9Y675 71 aa11.43□□□□□ -0.58
CLDND1-201ENST00000341181 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
CLDND1-201ENST00000341181 A0A1B0GVX0 72 aa11.41□□□□□ -0.58
CLDND1-201ENST00000341181 C8orf17Q9NRJ1 99 aa11.38□□□□□ -0.59
CLDND1-201ENST00000341181 LRP2P98164 4655 aa11.38□□□□□ -0.59
CLDND1-201ENST00000341181 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
CLDND1-201ENST00000341181 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
CLDND1-201ENST00000341181 TMEM254Q8TBM7 123 aa11.33□□□□□ -0.6
CLDND1-201ENST00000341181 KRTAP13-3Q3SY46 172 aa11.33□□□□□ -0.6
CLDND1-201ENST00000341181 KLKP1Q107X0 134 aa11.3□□□□□ -0.6
CLDND1-201ENST00000341181 LINC00313P59037 77 aa11.28□□□□□ -0.6
CLDND1-201ENST00000341181 TPRXLQ17RH7 258 aa11.27□□□□□ -0.6
CLDND1-201ENST00000341181 A0A0U1RQV1 116 aa11.26□□□□□ -0.61
CLDND1-201ENST00000341181 KRTAP16-1A8MUX0 517 aa11.24□□□□□ -0.61
CLDND1-201ENST00000341181 H7BZZ5 65 aa11.24□□□□□ -0.61
CLDND1-201ENST00000341181 C8orf87E5RJ46 101 aa11.24□□□□□ -0.61
CLDND1-201ENST00000341181 NDUFS5O43920 106 aa11.23□□□□□ -0.61
CLDND1-201ENST00000341181 MRPL34Q9BQ48 92 aaKnown RBP11.23□□□□□ -0.61
CLDND1-201ENST00000341181 XP32Q5T750 250 aa11.2□□□□□ -0.62
CLDND1-201ENST00000341181 C5orf47Q569G3 176 aa11.2□□□□□ -0.62
CLDND1-201ENST00000341181 H0Y9P7 68 aa11.16□□□□□ -0.62
CLDND1-201ENST00000341181 ZCCHC13Q8WW36 166 aaKnown RBP11.16□□□□□ -0.62
CLDND1-201ENST00000341181 LINC00208Q96KT6 92 aa11.16□□□□□ -0.62
CLDND1-201ENST00000341181 TMEM258P61165 79 aa11.13□□□□□ -0.63
CLDND1-201ENST00000341181 TRAV22A0A0B4J277 110 aa11.11□□□□□ -0.63
CLDND1-201ENST00000341181 MP68P56378 58 aa11.11□□□□□ -0.63
CLDND1-201ENST00000341181 Q5W150 140 aa11.11□□□□□ -0.63
CLDND1-201ENST00000341181 C20orf166-AS1Q96NR2 134 aa11.1□□□□□ -0.63
CLDND1-201ENST00000341181 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
CLDND1-201ENST00000341181 TP53AIP1Q9HCN2 124 aa11.09□□□□□ -0.63
CLDND1-201ENST00000341181 A8MUU9 505 aa11.08□□□□□ -0.64
CLDND1-201ENST00000341181 C1orf64Q8NEQ6 169 aa11.07□□□□□ -0.64
CLDND1-201ENST00000341181 UBR4Q5T4S7 5183 aa11.07□□□□□ -0.64
CLDND1-201ENST00000341181 NDUFC1O43677 76 aa11.05□□□□□ -0.64
CLDND1-201ENST00000341181 Q75L30 129 aa11.05□□□□□ -0.64
CLDND1-201ENST00000341181 FAM236DA0A1B0GTK5 79 aa11.04□□□□□ -0.64
CLDND1-201ENST00000341181 FAM236CP0DP71 79 aa11.04□□□□□ -0.64
CLDND1-201ENST00000341181 RPL37P61927 97 aaKnown RBP11.04□□□□□ -0.64
CLDND1-201ENST00000341181 MUC2Q02817 5179 aa10.97□□□□□ -0.65
CLDND1-201ENST00000341181 PCOTHQ58A44 107 aa10.96□□□□□ -0.66
CLDND1-201ENST00000341181 H3BPC8 53 aa10.95□□□□□ -0.66
CLDND1-201ENST00000341181 MUC17Q685J3 4493 aa10.94□□□□□ -0.66
CLDND1-201ENST00000341181 ATP11AUNQ6ZP68 121 aa10.9□□□□□ -0.66
CLDND1-201ENST00000341181 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
CLDND1-201ENST00000341181 SEC61BP60468 96 aaKnown RBP10.84□□□□□ -0.67
CLDND1-201ENST00000341181 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
CLDND1-201ENST00000341181 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
CLDND1-201ENST00000341181 ATP5EP56381 51 aaPredicted RBP10.8□□□□□ -0.68
CLDND1-201ENST00000341181 RPS28P62857 69 aaKnown RBP10.8□□□□□ -0.68
CLDND1-201ENST00000341181 KRTAP4-1Q9BYQ7 146 aa10.79□□□□□ -0.68
CLDND1-201ENST00000341181 SERP1Q9Y6X1 66 aa10.79□□□□□ -0.68
CLDND1-201ENST00000341181 IGKV2D-30A0A075B6S6 120 aa10.77□□□□□ -0.69
CLDND1-201ENST00000341181 IGKV2-30P06310 120 aa10.77□□□□□ -0.69
CLDND1-201ENST00000341181 SPANXA2-OT1Q8N9U9 137 aa10.75□□□□□ -0.69
CLDND1-201ENST00000341181 HRES1P13985 223 aa10.7□□□□□ -0.7
CLDND1-201ENST00000341181 SPINK7P58062 85 aa10.69□□□□□ -0.7
CLDND1-201ENST00000341181 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
CLDND1-201ENST00000341181 COA5Q86WW8 74 aa10.56□□□□□ -0.72
CLDND1-201ENST00000341181 SMIM26A0A096LP01 95 aa10.53□□□□□ -0.72
CLDND1-201ENST00000341181 C4orf26Q17RF5 130 aa10.52□□□□□ -0.72
CLDND1-201ENST00000341181 FAT4Q6V0I7 4981 aa10.52□□□□□ -0.73
CLDND1-201ENST00000341181 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
CLDND1-201ENST00000341181 DMAC1Q96GE9 116 aa10.49□□□□□ -0.73
CLDND1-201ENST00000341181 KRTAP19-2Q3LHN2 52 aa10.42□□□□□ -0.74
CLDND1-201ENST00000341181 ACYP2P14621 99 aa10.42□□□□□ -0.74
CLDND1-201ENST00000341181 KRTAP3-1Q9BYR8 98 aa10.39□□□□□ -0.75
CLDND1-201ENST00000341181 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
CLDND1-201ENST00000341181 COX6B2Q6YFQ2 88 aa10.32□□□□□ -0.76
CLDND1-201ENST00000341181 LCE2CQ5TA81 110 aa10.32□□□□□ -0.76
CLDND1-201ENST00000341181 FLGP20930 4061 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms