RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NDUFB1O75438 58 aa11.9□□□□□ -0.5
RIPPLY3-201ENST00000329553 CYP4F30PQ9H0H9 118 aa11.9□□□□□ -0.51
RIPPLY3-201ENST00000329553 FAT1Q14517 4588 aa11.89□□□□□ -0.51
RIPPLY3-201ENST00000329553 C1orf64Q8NEQ6 169 aa11.89□□□□□ -0.51
RIPPLY3-201ENST00000329553 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
RIPPLY3-201ENST00000329553 TRAV22A0A0B4J277 110 aa11.87□□□□□ -0.51
RIPPLY3-201ENST00000329553 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
RIPPLY3-201ENST00000329553 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
RIPPLY3-201ENST00000329553 LINC00208Q96KT6 92 aa11.86□□□□□ -0.51
RIPPLY3-201ENST00000329553 H3BPC8 53 aa11.85□□□□□ -0.51
RIPPLY3-201ENST00000329553 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
RIPPLY3-201ENST00000329553 Q96NJ1 140 aa11.85□□□□□ -0.51
RIPPLY3-201ENST00000329553 MMP24-AS1A0A0U1RRL7 71 aa11.84□□□□□ -0.51
RIPPLY3-201ENST00000329553 H0Y9P7 68 aa11.84□□□□□ -0.51
RIPPLY3-201ENST00000329553 CD164Q04900 197 aa11.83□□□□□ -0.52
RIPPLY3-201ENST00000329553 PRO0628Q9UI54 55 aa11.81□□□□□ -0.52
RIPPLY3-201ENST00000329553 PRR4Q16378 134 aa11.79□□□□□ -0.52
RIPPLY3-201ENST00000329553 ASB16-AS1Q495Z4 193 aa11.77□□□□□ -0.53
RIPPLY3-201ENST00000329553 SPANXA2-OT1Q8N9U9 137 aa11.76□□□□□ -0.53
RIPPLY3-201ENST00000329553 Q1T7F1 81 aa11.75□□□□□ -0.53
RIPPLY3-201ENST00000329553 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
RIPPLY3-201ENST00000329553 PRR26Q8N8Z3 221 aa11.72□□□□□ -0.53
RIPPLY3-201ENST00000329553 HSPG2P98160 4391 aa11.69□□□□□ -0.54
RIPPLY3-201ENST00000329553 C8orf17Q9NRJ1 99 aa11.69□□□□□ -0.54
RIPPLY3-201ENST00000329553 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
RIPPLY3-201ENST00000329553 TP53AIP1Q9HCN2 124 aa11.67□□□□□ -0.54
RIPPLY3-201ENST00000329553 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
RIPPLY3-201ENST00000329553 BRK1Q8WUW1 75 aa11.67□□□□□ -0.54
RIPPLY3-201ENST00000329553 A0A1B0GVX0 72 aa11.66□□□□□ -0.54
RIPPLY3-201ENST00000329553 C4orf48Q5BLP8 95 aa11.64□□□□□ -0.55
RIPPLY3-201ENST00000329553 RYR1P21817 5038 aa11.63□□□□□ -0.55
RIPPLY3-201ENST00000329553 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
RIPPLY3-201ENST00000329553 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
RIPPLY3-201ENST00000329553 SPINK1P00995 79 aa11.6□□□□□ -0.55
RIPPLY3-201ENST00000329553 Q5VSD8 79 aa11.6□□□□□ -0.55
RIPPLY3-201ENST00000329553 PKHD1L1Q86WI1 4243 aa11.6□□□□□ -0.55
RIPPLY3-201ENST00000329553 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
RIPPLY3-201ENST00000329553 LIMD2Q9BT23 127 aa11.59□□□□□ -0.55
RIPPLY3-201ENST00000329553 LINC00304Q8N9R0 145 aa11.59□□□□□ -0.55
RIPPLY3-201ENST00000329553 NOTCH2NLQ7Z3S9 236 aa11.58□□□□□ -0.56
RIPPLY3-201ENST00000329553 KRTAP17-1Q9BYP8 105 aa11.57□□□□□ -0.56
RIPPLY3-201ENST00000329553 MRPL34Q9BQ48 92 aaKnown RBP11.56□□□□□ -0.56
RIPPLY3-201ENST00000329553 V9GYY9 64 aa11.56□□□□□ -0.56
RIPPLY3-201ENST00000329553 EPPK1P58107 5090 aaKnown RBP11.56□□□□□ -0.56
RIPPLY3-201ENST00000329553 PSPHP1O15172 72 aa11.54□□□□□ -0.56
RIPPLY3-201ENST00000329553 KIAA1109Q2LD37 5005 aa11.54□□□□□ -0.56
RIPPLY3-201ENST00000329553 SPAG11AQ6PDA7 123 aa11.53□□□□□ -0.56
RIPPLY3-201ENST00000329553 NDUFS5O43920 106 aa11.52□□□□□ -0.56
RIPPLY3-201ENST00000329553 PCOTHQ58A44 107 aa11.51□□□□□ -0.57
RIPPLY3-201ENST00000329553 Q8N9P0 234 aaPredicted RBP11.5□□□□□ -0.57
RIPPLY3-201ENST00000329553 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
RIPPLY3-201ENST00000329553 COA5Q86WW8 74 aa11.48□□□□□ -0.57
RIPPLY3-201ENST00000329553 A8MUN3 132 aa11.48□□□□□ -0.57
RIPPLY3-201ENST00000329553 Q5VV11 94 aa11.44□□□□□ -0.58
RIPPLY3-201ENST00000329553 LRP1Q07954 4544 aaKnown RBP11.43□□□□□ -0.58
RIPPLY3-201ENST00000329553 C8orf87E5RJ46 101 aa11.43□□□□□ -0.58
RIPPLY3-201ENST00000329553 LINC00313P59037 77 aa11.41□□□□□ -0.58
RIPPLY3-201ENST00000329553 Q8N1X5 172 aa11.41□□□□□ -0.58
RIPPLY3-201ENST00000329553 KRTAP13-3Q3SY46 172 aa11.39□□□□□ -0.59
RIPPLY3-201ENST00000329553 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
RIPPLY3-201ENST00000329553 Q5W150 140 aa11.37□□□□□ -0.59
RIPPLY3-201ENST00000329553 LOC101927531A0A1B0GV80 90 aa11.37□□□□□ -0.59
RIPPLY3-201ENST00000329553 TNXBP22105 4242 aa11.37□□□□□ -0.59
RIPPLY3-201ENST00000329553 PRR15LQ9BU68 103 aa11.33□□□□□ -0.59
RIPPLY3-201ENST00000329553 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
RIPPLY3-201ENST00000329553 HRES1P13985 223 aa11.31□□□□□ -0.6
RIPPLY3-201ENST00000329553 KRTAP16-1A8MUX0 517 aa11.31□□□□□ -0.6
RIPPLY3-201ENST00000329553 FLG2Q5D862 2391 aaPredicted RBP11.3□□□□□ -0.6
RIPPLY3-201ENST00000329553 CHKB-CPT1BH3BT56 60 aa11.28□□□□□ -0.6
RIPPLY3-201ENST00000329553 Q75L30 129 aa11.28□□□□□ -0.6
RIPPLY3-201ENST00000329553 RETNLBQ9BQ08 111 aa11.28□□□□□ -0.6
RIPPLY3-201ENST00000329553 LINC01558Q9Y6Z2 57 aa11.25□□□□□ -0.61
RIPPLY3-201ENST00000329553 A8MU10 97 aa11.23□□□□□ -0.61
RIPPLY3-201ENST00000329553 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
RIPPLY3-201ENST00000329553 MT1HL1P0DM35 61 aa11.2□□□□□ -0.62
RIPPLY3-201ENST00000329553 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
RIPPLY3-201ENST00000329553 DMBT1Q9UGM3 2413 aaPredicted RBP11.17□□□□□ -0.62
RIPPLY3-201ENST00000329553 C9orf92A6NGG3 77 aa11.15□□□□□ -0.62
RIPPLY3-201ENST00000329553 LCA10Q71F78 164 aa11.13□□□□□ -0.63
RIPPLY3-201ENST00000329553 A6NED7 52 aa11.13□□□□□ -0.63
RIPPLY3-201ENST00000329553 ACYP2P14621 99 aa11.13□□□□□ -0.63
RIPPLY3-201ENST00000329553 DMAC1Q96GE9 116 aa11.11□□□□□ -0.63
RIPPLY3-201ENST00000329553 IGKV2-30P06310 120 aa11.11□□□□□ -0.63
RIPPLY3-201ENST00000329553 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
RIPPLY3-201ENST00000329553 CDC42SE1Q9NRR8 79 aa11.05□□□□□ -0.64
RIPPLY3-201ENST00000329553 ATP11AUNQ6ZP68 121 aa11.04□□□□□ -0.64
RIPPLY3-201ENST00000329553 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.65
RIPPLY3-201ENST00000329553 BIRC6Q9NR09 4857 aa11.02□□□□□ -0.65
RIPPLY3-201ENST00000329553 A8MUU9 505 aa11.01□□□□□ -0.65
RIPPLY3-201ENST00000329553 SPINK7P58062 85 aa11□□□□□ -0.65
RIPPLY3-201ENST00000329553 SPTSSBQ8NFR3 76 aa10.97□□□□□ -0.65
RIPPLY3-201ENST00000329553 ABCA13Q86UQ4 5058 aa10.94□□□□□ -0.66
RIPPLY3-201ENST00000329553 HERC2O95714 4834 aa10.93□□□□□ -0.66
RIPPLY3-201ENST00000329553 IGKV2D-30A0A075B6S6 120 aa10.91□□□□□ -0.66
RIPPLY3-201ENST00000329553 A6NN06 94 aa10.88□□□□□ -0.67
RIPPLY3-201ENST00000329553 XP32Q5T750 250 aa10.82□□□□□ -0.68
RIPPLY3-201ENST00000329553 KTN1-AS1Q86SY8 53 aa10.81□□□□□ -0.68
RIPPLY3-201ENST00000329553 A0A1B0GU69 56 aa10.81□□□□□ -0.68
RIPPLY3-201ENST00000329553 C7orf65Q6ZTY9 151 aa10.81□□□□□ -0.68
RIPPLY3-201ENST00000329553 J3QL48 77 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms