RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 A8MWP4 228 aa10.34□□□□□ -0.75
CDK4-202ENST00000312990 IGKV3D-7A0A0C4DH55 119 aa10.34□□□□□ -0.75
CDK4-202ENST00000312990 KRTAP13-3Q3SY46 172 aa10.33□□□□□ -0.76
CDK4-202ENST00000312990 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
CDK4-202ENST00000312990 K7EQZ3 153 aa10.32□□□□□ -0.76
CDK4-202ENST00000312990 CXCL6P80162 114 aa10.31□□□□□ -0.76
CDK4-202ENST00000312990 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
CDK4-202ENST00000312990 Q8N9L7 120 aa10.31□□□□□ -0.76
CDK4-202ENST00000312990 IGHV6-1A0A0B4J1U7 121 aa10.31□□□□□ -0.76
CDK4-202ENST00000312990 TPRXLQ17RH7 258 aa10.31□□□□□ -0.76
CDK4-202ENST00000312990 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
CDK4-202ENST00000312990 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
CDK4-202ENST00000312990 NDUFB1O75438 58 aa10.29□□□□□ -0.76
CDK4-202ENST00000312990 NOTCH2NLQ7Z3S9 236 aa10.29□□□□□ -0.76
CDK4-202ENST00000312990 ATP5EP2Q5VTU8 51 aa10.28□□□□□ -0.76
CDK4-202ENST00000312990 MT-ATP8P03928 68 aa10.23□□□□□ -0.77
CDK4-202ENST00000312990 LINC00313P59037 77 aa10.23□□□□□ -0.77
CDK4-202ENST00000312990 C8orf17Q9NRJ1 99 aa10.22□□□□□ -0.77
CDK4-202ENST00000312990 C8orf87E5RJ46 101 aa10.22□□□□□ -0.77
CDK4-202ENST00000312990 MMP24-AS1A0A0U1RRL7 71 aa10.2□□□□□ -0.78
CDK4-202ENST00000312990 KRTAP16-1A8MUX0 517 aa10.19□□□□□ -0.78
CDK4-202ENST00000312990 XP32Q5T750 250 aa10.19□□□□□ -0.78
CDK4-202ENST00000312990 HIST1H4AP62805 103 aaKnown RBP10.15□□□□□ -0.79
CDK4-202ENST00000312990 hDV103S1A0JD37 113 aa10.12□□□□□ -0.79
CDK4-202ENST00000312990 HCG22E2RYF7 251 aa10.12□□□□□ -0.79
CDK4-202ENST00000312990 WFDC13Q8IUB5 93 aa10.12□□□□□ -0.79
CDK4-202ENST00000312990 A0A087WVE0 104 aa10.12□□□□□ -0.79
CDK4-202ENST00000312990 MUC17Q685J3 4493 aa10.1□□□□□ -0.79
CDK4-202ENST00000312990 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
CDK4-202ENST00000312990 CASC2Q6XLA1 102 aa10.09□□□□□ -0.79
CDK4-202ENST00000312990 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
CDK4-202ENST00000312990 A8MUU9 505 aa10.08□□□□□ -0.8
CDK4-202ENST00000312990 MRPL34Q9BQ48 92 aaKnown RBP10.08□□□□□ -0.8
CDK4-202ENST00000312990 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
CDK4-202ENST00000312990 Q75L30 129 aa10.06□□□□□ -0.8
CDK4-202ENST00000312990 Q8N9P0 234 aaPredicted RBP10.06□□□□□ -0.8
CDK4-202ENST00000312990 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
CDK4-202ENST00000312990 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
CDK4-202ENST00000312990 NDUFS5O43920 106 aa9.97□□□□□ -0.81
CDK4-202ENST00000312990 ANAPC13Q9BS18 74 aa9.96□□□□□ -0.82
CDK4-202ENST00000312990 PCOTHQ58A44 107 aa9.94□□□□□ -0.82
CDK4-202ENST00000312990 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
CDK4-202ENST00000312990 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
CDK4-202ENST00000312990 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
CDK4-202ENST00000312990 MUC2Q02817 5179 aa9.9□□□□□ -0.82
CDK4-202ENST00000312990 ZCCHC13Q8WW36 166 aaKnown RBP9.9□□□□□ -0.82
CDK4-202ENST00000312990 FAM236AA0A1B0GUQ0 79 aa9.9□□□□□ -0.83
CDK4-202ENST00000312990 FAM236BA0A1B0GV22 79 aa9.9□□□□□ -0.83
CDK4-202ENST00000312990 Q5W150 140 aa9.87□□□□□ -0.83
CDK4-202ENST00000312990 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
CDK4-202ENST00000312990 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
CDK4-202ENST00000312990 KRTAP4-1Q9BYQ7 146 aa9.81□□□□□ -0.84
CDK4-202ENST00000312990 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
CDK4-202ENST00000312990 UQCRQO14949 82 aa9.77□□□□□ -0.84
CDK4-202ENST00000312990 TRAV22A0A0B4J277 110 aa9.75□□□□□ -0.85
CDK4-202ENST00000312990 ATOX1O00244 68 aa9.74□□□□□ -0.85
CDK4-202ENST00000312990 SMIM20Q8N5G0 67 aa9.7□□□□□ -0.86
CDK4-202ENST00000312990 H0Y9P7 68 aa9.69□□□□□ -0.86
CDK4-202ENST00000312990 SPINK7P58062 85 aa9.69□□□□□ -0.86
CDK4-202ENST00000312990 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
CDK4-202ENST00000312990 IGKV2D-30A0A075B6S6 120 aa9.67□□□□□ -0.86
CDK4-202ENST00000312990 IGKV2-30P06310 120 aa9.67□□□□□ -0.86
CDK4-202ENST00000312990 C5orf47Q569G3 176 aa9.65□□□□□ -0.86
CDK4-202ENST00000312990 C7orf65Q6ZTY9 151 aa9.64□□□□□ -0.87
CDK4-202ENST00000312990 COX7CP15954 63 aa9.64□□□□□ -0.87
CDK4-202ENST00000312990 MP68P56378 58 aa9.62□□□□□ -0.87
CDK4-202ENST00000312990 SERP2Q8N6R1 65 aa9.61□□□□□ -0.87
CDK4-202ENST00000312990 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
CDK4-202ENST00000312990 HRES1P13985 223 aa9.6□□□□□ -0.87
CDK4-202ENST00000312990 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
CDK4-202ENST00000312990 C1orf64Q8NEQ6 169 aa9.59□□□□□ -0.87
CDK4-202ENST00000312990 CYP4F30PQ9H0H9 118 aa9.58□□□□□ -0.88
CDK4-202ENST00000312990 H3BPC8 53 aa9.55□□□□□ -0.88
CDK4-202ENST00000312990 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
CDK4-202ENST00000312990 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
CDK4-202ENST00000312990 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
CDK4-202ENST00000312990 KRTAP19-2Q3LHN2 52 aa9.51□□□□□ -0.89
CDK4-202ENST00000312990 KLKP1Q107X0 134 aa9.48□□□□□ -0.89
CDK4-202ENST00000312990 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
CDK4-202ENST00000312990 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
CDK4-202ENST00000312990 SNURFQ9Y675 71 aa9.46□□□□□ -0.89
CDK4-202ENST00000312990 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
CDK4-202ENST00000312990 CYSTM1Q9H1C7 97 aa9.45□□□□□ -0.9
CDK4-202ENST00000312990 RBM12B-AS1Q9P1G2 102 aa9.44□□□□□ -0.9
CDK4-202ENST00000312990 LCE2CQ5TA81 110 aa9.42□□□□□ -0.9
CDK4-202ENST00000312990 TMEM258P61165 79 aa9.39□□□□□ -0.91
CDK4-202ENST00000312990 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
CDK4-202ENST00000312990 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
CDK4-202ENST00000312990 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
CDK4-202ENST00000312990 KRTAP3-1Q9BYR8 98 aa9.36□□□□□ -0.91
CDK4-202ENST00000312990 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
CDK4-202ENST00000312990 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
CDK4-202ENST00000312990 H7BZZ5 65 aa9.25□□□□□ -0.93
CDK4-202ENST00000312990 MT1HP80294 61 aa9.24□□□□□ -0.93
CDK4-202ENST00000312990 NDUFC1O43677 76 aa9.23□□□□□ -0.93
CDK4-202ENST00000312990 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
CDK4-202ENST00000312990 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
CDK4-202ENST00000312990 A8MUN3 132 aa9.2□□□□□ -0.94
CDK4-202ENST00000312990 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
CDK4-202ENST00000312990 SVIPQ8NHG7 77 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms