RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
BRAF-201ENST00000288602 CDK2AP2O75956 126 aa11.27□□□□□ -0.61
BRAF-201ENST00000288602 SSBP3-AS1Q7Z2R9 100 aa11.27□□□□□ -0.61
BRAF-201ENST00000288602 LINC00208Q96KT6 92 aa11.26□□□□□ -0.61
BRAF-201ENST00000288602 H0Y9P7 68 aa11.25□□□□□ -0.61
BRAF-201ENST00000288602 MP68P56378 58 aa11.25□□□□□ -0.61
BRAF-201ENST00000288602 KRTAP1-4P0C5Y4 121 aa11.23□□□□□ -0.61
BRAF-201ENST00000288602 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
BRAF-201ENST00000288602 ASB16-AS1Q495Z4 193 aa11.21□□□□□ -0.61
BRAF-201ENST00000288602 CD164Q04900 197 aa11.2□□□□□ -0.62
BRAF-201ENST00000288602 DYNC1H1Q14204 4646 aaKnown RBP11.2□□□□□ -0.62
BRAF-201ENST00000288602 NDUFS5O43920 106 aa11.19□□□□□ -0.62
BRAF-201ENST00000288602 PRR4Q16378 134 aa11.19□□□□□ -0.62
BRAF-201ENST00000288602 SMR3BP02814 79 aaPredicted RBP11.18□□□□□ -0.62
BRAF-201ENST00000288602 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
BRAF-201ENST00000288602 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
BRAF-201ENST00000288602 TRAV22A0A0B4J277 110 aa11.16□□□□□ -0.62
BRAF-201ENST00000288602 PLA2G1BP04054 148 aaKnown RBP11.16□□□□□ -0.62
BRAF-201ENST00000288602 RYR2Q92736 4967 aa11.15□□□□□ -0.62
BRAF-201ENST00000288602 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
BRAF-201ENST00000288602 Q1T7F1 81 aa11.13□□□□□ -0.63
BRAF-201ENST00000288602 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
BRAF-201ENST00000288602 PSPHP1O15172 72 aa11.1□□□□□ -0.63
BRAF-201ENST00000288602 CYP4F30PQ9H0H9 118 aa11.09□□□□□ -0.63
BRAF-201ENST00000288602 TP53AIP1Q9HCN2 124 aa11.09□□□□□ -0.63
BRAF-201ENST00000288602 FAT1Q14517 4588 aa11.08□□□□□ -0.64
BRAF-201ENST00000288602 H3BPC8 53 aa11.07□□□□□ -0.64
BRAF-201ENST00000288602 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
BRAF-201ENST00000288602 APOBP04114 4563 aaKnown RBP11.06□□□□□ -0.64
BRAF-201ENST00000288602 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
BRAF-201ENST00000288602 PCOTHQ58A44 107 aa11.03□□□□□ -0.64
BRAF-201ENST00000288602 V9GYY9 64 aa11.03□□□□□ -0.64
BRAF-201ENST00000288602 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
BRAF-201ENST00000288602 LINC00313P59037 77 aa11□□□□□ -0.65
BRAF-201ENST00000288602 Q5W150 140 aa11□□□□□ -0.65
BRAF-201ENST00000288602 A8MUN3 132 aa10.98□□□□□ -0.65
BRAF-201ENST00000288602 LIMD2Q9BT23 127 aa10.97□□□□□ -0.65
BRAF-201ENST00000288602 C8orf87E5RJ46 101 aa10.96□□□□□ -0.65
BRAF-201ENST00000288602 RETNLBQ9BQ08 111 aa10.94□□□□□ -0.66
BRAF-201ENST00000288602 SPANXA2-OT1Q8N9U9 137 aa10.93□□□□□ -0.66
BRAF-201ENST00000288602 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
BRAF-201ENST00000288602 SPINK1P00995 79 aa10.92□□□□□ -0.66
BRAF-201ENST00000288602 LINC00304Q8N9R0 145 aa10.9□□□□□ -0.66
BRAF-201ENST00000288602 KRTAP13-3Q3SY46 172 aa10.9□□□□□ -0.67
BRAF-201ENST00000288602 Q5VV11 94 aa10.89□□□□□ -0.67
BRAF-201ENST00000288602 A8MU10 97 aa10.87□□□□□ -0.67
BRAF-201ENST00000288602 SEC61GP60059 68 aa10.87□□□□□ -0.67
BRAF-201ENST00000288602 PMAIP1Q13794 54 aa10.87□□□□□ -0.67
BRAF-201ENST00000288602 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
BRAF-201ENST00000288602 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
BRAF-201ENST00000288602 Q8N9P0 234 aaPredicted RBP10.86□□□□□ -0.67
BRAF-201ENST00000288602 RYR3Q15413 4870 aa10.86□□□□□ -0.67
BRAF-201ENST00000288602 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
BRAF-201ENST00000288602 CHKB-CPT1BH3BT56 60 aa10.81□□□□□ -0.68
BRAF-201ENST00000288602 PRR15LQ9BU68 103 aa10.81□□□□□ -0.68
BRAF-201ENST00000288602 PKHD1L1Q86WI1 4243 aa10.8□□□□□ -0.68
BRAF-201ENST00000288602 FAM229AH3BQW9 127 aa10.77□□□□□ -0.69
BRAF-201ENST00000288602 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
BRAF-201ENST00000288602 COA5Q86WW8 74 aa10.76□□□□□ -0.69
BRAF-201ENST00000288602 RPS29P62273 56 aaKnown RBP10.73□□□□□ -0.69
BRAF-201ENST00000288602 HSPG2P98160 4391 aa10.71□□□□□ -0.69
BRAF-201ENST00000288602 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
BRAF-201ENST00000288602 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
BRAF-201ENST00000288602 HRES1P13985 223 aa10.68□□□□□ -0.7
BRAF-201ENST00000288602 IGKV2-30P06310 120 aa10.67□□□□□ -0.7
BRAF-201ENST00000288602 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
BRAF-201ENST00000288602 Q75L30 129 aa10.66□□□□□ -0.7
BRAF-201ENST00000288602 IGKV2D-30A0A075B6S6 120 aa10.66□□□□□ -0.7
BRAF-201ENST00000288602 A6NED7 52 aa10.66□□□□□ -0.7
BRAF-201ENST00000288602 LCA10Q71F78 164 aa10.65□□□□□ -0.7
BRAF-201ENST00000288602 Q5VSD8 79 aa10.63□□□□□ -0.71
BRAF-201ENST00000288602 TNXBP22105 4242 aa10.6□□□□□ -0.71
BRAF-201ENST00000288602 KRTAP17-1Q9BYP8 105 aa10.6□□□□□ -0.71
BRAF-201ENST00000288602 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
BRAF-201ENST00000288602 RYR1P21817 5038 aa10.58□□□□□ -0.72
BRAF-201ENST00000288602 Q8N1X5 172 aa10.58□□□□□ -0.72
BRAF-201ENST00000288602 ATP11AUNQ6ZP68 121 aa10.57□□□□□ -0.72
BRAF-201ENST00000288602 LINC01558Q9Y6Z2 57 aa10.55□□□□□ -0.72
BRAF-201ENST00000288602 KTN1-AS1Q86SY8 53 aa10.54□□□□□ -0.72
BRAF-201ENST00000288602 KIAA1109Q2LD37 5005 aa10.53□□□□□ -0.72
BRAF-201ENST00000288602 CDC42SE1Q9NRR8 79 aa10.52□□□□□ -0.72
BRAF-201ENST00000288602 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
BRAF-201ENST00000288602 ACYP2P14621 99 aa10.51□□□□□ -0.73
BRAF-201ENST00000288602 A6NN06 94 aa10.48□□□□□ -0.73
BRAF-201ENST00000288602 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
BRAF-201ENST00000288602 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
BRAF-201ENST00000288602 EPPK1P58107 5090 aaKnown RBP10.47□□□□□ -0.73
BRAF-201ENST00000288602 MYCBP2O75592 4640 aa10.47□□□□□ -0.73
BRAF-201ENST00000288602 SPINK7P58062 85 aa10.46□□□□□ -0.73
BRAF-201ENST00000288602 C20orf166-AS1Q96NR2 134 aa10.46□□□□□ -0.73
BRAF-201ENST00000288602 DMBT1Q9UGM3 2413 aaPredicted RBP10.46□□□□□ -0.74
BRAF-201ENST00000288602 A8MUU9 505 aa10.45□□□□□ -0.74
BRAF-201ENST00000288602 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
BRAF-201ENST00000288602 RBM12B-AS1Q9P1G2 102 aa10.42□□□□□ -0.74
BRAF-201ENST00000288602 MT1HL1P0DM35 61 aa10.27□□□□□ -0.77
BRAF-201ENST00000288602 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
BRAF-201ENST00000288602 XP32Q5T750 250 aa10.16□□□□□ -0.78
BRAF-201ENST00000288602 KRTAP4-5Q9BYR2 181 aa10.16□□□□□ -0.78
BRAF-201ENST00000288602 A0A1B0GU69 56 aa10.14□□□□□ -0.79
BRAF-201ENST00000288602 RPL37P61927 97 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms