RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 NEBP20929 6669 aa6.37□□□□□ -1.39
MRPS28-201ENST00000276585 A0A1B0GV72 72 aa6.37□□□□□ -1.39
MRPS28-201ENST00000276585 BATFQ16520 125 aa6.37□□□□□ -1.39
MRPS28-201ENST00000276585 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
MRPS28-201ENST00000276585 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
MRPS28-201ENST00000276585 A8MUU9 505 aa6.36□□□□□ -1.39
MRPS28-201ENST00000276585 DNAL4O96015 105 aa6.36□□□□□ -1.39
MRPS28-201ENST00000276585 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
MRPS28-201ENST00000276585 TRACP01848 142 aa6.34□□□□□ -1.39
MRPS28-201ENST00000276585 COX6CP09669 75 aa6.34□□□□□ -1.39
MRPS28-201ENST00000276585 DSCR10P59022 87 aa6.34□□□□□ -1.39
MRPS28-201ENST00000276585 ANKRD29Q8N6D5 301 aa6.34□□□□□ -1.39
MRPS28-201ENST00000276585 H3BQ85 93 aa6.33□□□□□ -1.4
MRPS28-201ENST00000276585 ATP11AUNQ6ZP68 121 aa6.33□□□□□ -1.4
MRPS28-201ENST00000276585 A0A1B0GV90 55 aa6.32□□□□□ -1.4
MRPS28-201ENST00000276585 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
MRPS28-201ENST00000276585 H3BS24 57 aa6.32□□□□□ -1.4
MRPS28-201ENST00000276585 TMEM256-PLSCR3K7ERE1 68 aa6.32□□□□□ -1.4
MRPS28-201ENST00000276585 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
MRPS28-201ENST00000276585 SIGMAR1Q99720 223 aa6.32□□□□□ -1.4
MRPS28-201ENST00000276585 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
MRPS28-201ENST00000276585 CCKP06307 115 aa6.3□□□□□ -1.4
MRPS28-201ENST00000276585 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
MRPS28-201ENST00000276585 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
MRPS28-201ENST00000276585 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
MRPS28-201ENST00000276585 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
MRPS28-201ENST00000276585 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
MRPS28-201ENST00000276585 SCGB1C2P0DMR2 95 aa6.26□□□□□ -1.41
MRPS28-201ENST00000276585 NAA38Q9BRA0 125 aaKnown RBP6.26□□□□□ -1.41
MRPS28-201ENST00000276585 MUC12Q9UKN1 5478 aa6.25□□□□□ -1.41
MRPS28-201ENST00000276585 MT2AP02795 61 aa6.25□□□□□ -1.41
MRPS28-201ENST00000276585 LINC00313P59037 77 aa6.25□□□□□ -1.41
MRPS28-201ENST00000276585 GTF2H5Q6ZYL4 71 aa6.25□□□□□ -1.41
MRPS28-201ENST00000276585 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
MRPS28-201ENST00000276585 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
MRPS28-201ENST00000276585 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
MRPS28-201ENST00000276585 BAALC-AS2P0C853 105 aa6.23□□□□□ -1.41
MRPS28-201ENST00000276585 VPS25Q9BRG1 176 aa6.23□□□□□ -1.41
MRPS28-201ENST00000276585 TAX1BP3O14907 124 aa6.22□□□□□ -1.41
MRPS28-201ENST00000276585 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
MRPS28-201ENST00000276585 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
MRPS28-201ENST00000276585 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
MRPS28-201ENST00000276585 DSCR8Q96T75 97 aa6.21□□□□□ -1.42
MRPS28-201ENST00000276585 A0A1B0GVX0 72 aa6.2□□□□□ -1.42
MRPS28-201ENST00000276585 MT1FP04733 61 aa6.2□□□□□ -1.42
MRPS28-201ENST00000276585 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
MRPS28-201ENST00000276585 ATXN8Q156A1 80 aa6.19□□□□□ -1.42
MRPS28-201ENST00000276585 Q6ZQT0 140 aa6.19□□□□□ -1.42
MRPS28-201ENST00000276585 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
MRPS28-201ENST00000276585 C9JAW5 83 aa6.18□□□□□ -1.42
MRPS28-201ENST00000276585 A0A1W2PPM0 123 aa6.17□□□□□ -1.42
MRPS28-201ENST00000276585 HRES1P13985 223 aa6.17□□□□□ -1.42
MRPS28-201ENST00000276585 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
MRPS28-201ENST00000276585 C8orf87E5RJ46 101 aa6.16□□□□□ -1.42
MRPS28-201ENST00000276585 K7EP34 96 aa6.16□□□□□ -1.42
MRPS28-201ENST00000276585 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.42
MRPS28-201ENST00000276585 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
MRPS28-201ENST00000276585 TRBV20-1A0A075B6N2 111 aa6.13□□□□□ -1.43
MRPS28-201ENST00000276585 J3KT08 172 aa6.13□□□□□ -1.43
MRPS28-201ENST00000276585 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
MRPS28-201ENST00000276585 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
MRPS28-201ENST00000276585 A0A1B0GW54 56 aa6.1□□□□□ -1.43
MRPS28-201ENST00000276585 F8W1H4 67 aa6.1□□□□□ -1.43
MRPS28-201ENST00000276585 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
MRPS28-201ENST00000276585 ZCCHC13Q8WW36 166 aaKnown RBP6.1□□□□□ -1.43
MRPS28-201ENST00000276585 IGKV3D-7A0A0C4DH55 119 aa6.09□□□□□ -1.43
MRPS28-201ENST00000276585 A8MWP4 228 aa6.09□□□□□ -1.43
MRPS28-201ENST00000276585 K7ERU9 68 aa6.09□□□□□ -1.43
MRPS28-201ENST00000276585 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
MRPS28-201ENST00000276585 J3QR89 54 aa6.08□□□□□ -1.44
MRPS28-201ENST00000276585 PDE6GP18545 87 aa6.08□□□□□ -1.44
MRPS28-201ENST00000276585 MTURNQ8N3F0 131 aa6.06□□□□□ -1.44
MRPS28-201ENST00000276585 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
MRPS28-201ENST00000276585 NDUFB1O75438 58 aa6.05□□□□□ -1.44
MRPS28-201ENST00000276585 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
MRPS28-201ENST00000276585 H3BT86 120 aa6.04□□□□□ -1.44
MRPS28-201ENST00000276585 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
MRPS28-201ENST00000276585 MMP24-AS1A0A0U1RRL7 71 aa6.03□□□□□ -1.44
MRPS28-201ENST00000276585 SPINK7P58062 85 aa6.03□□□□□ -1.44
MRPS28-201ENST00000276585 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
MRPS28-201ENST00000276585 Q6ZVQ6 151 aa6.02□□□□□ -1.45
MRPS28-201ENST00000276585 NREPQ16612 68 aa6.01□□□□□ -1.45
MRPS28-201ENST00000276585 K7EQZ3 153 aa5.99□□□□□ -1.45
MRPS28-201ENST00000276585 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
MRPS28-201ENST00000276585 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
MRPS28-201ENST00000276585 KMT2DO14686 5537 aa5.99□□□□□ -1.45
MRPS28-201ENST00000276585 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
MRPS28-201ENST00000276585 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
MRPS28-201ENST00000276585 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
MRPS28-201ENST00000276585 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
MRPS28-201ENST00000276585 PRO0461Q9UI25 63 aa5.95□□□□□ -1.46
MRPS28-201ENST00000276585 hDV103S1A0JD37 113 aa5.93□□□□□ -1.46
MRPS28-201ENST00000276585 ETDBQ3ZM63 59 aa5.93□□□□□ -1.46
MRPS28-201ENST00000276585 BPY2O14599 106 aa5.91□□□□□ -1.46
MRPS28-201ENST00000276585 Q8N9L7 120 aa5.91□□□□□ -1.46
MRPS28-201ENST00000276585 Q5W150 140 aa5.9□□□□□ -1.46
MRPS28-201ENST00000276585 NDUFS5O43920 106 aa5.86□□□□□ -1.47
MRPS28-201ENST00000276585 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
MRPS28-201ENST00000276585 ACYP1P07311 99 aa5.85□□□□□ -1.47
MRPS28-201ENST00000276585 FAM240AA0A1B0GVK7 77 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms