RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 K7EQZ3 153 aa14.17□□□□□ -0.14
SSBP4-201ENST00000270061 ASB16-AS1Q495Z4 193 aa14.14□□□□□ -0.15
SSBP4-201ENST00000270061 A8MWP4 228 aa14.13□□□□□ -0.15
SSBP4-201ENST00000270061 Q5XG85 94 aa14.13□□□□□ -0.15
SSBP4-201ENST00000270061 LPAP08519 4548 aa14.12□□□□□ -0.15
SSBP4-201ENST00000270061 PRR15Q8IV56 129 aa14.09□□□□□ -0.15
SSBP4-201ENST00000270061 NDUFB1O75438 58 aa14.04□□□□□ -0.16
SSBP4-201ENST00000270061 PRR4Q16378 134 aa14.04□□□□□ -0.16
SSBP4-201ENST00000270061 C4orf48Q5BLP8 95 aa14.04□□□□□ -0.16
SSBP4-201ENST00000270061 SMIM20Q8N5G0 67 aa14.04□□□□□ -0.16
SSBP4-201ENST00000270061 SPINK1P00995 79 aa14.03□□□□□ -0.16
SSBP4-201ENST00000270061 LINC00304Q8N9R0 145 aa14.03□□□□□ -0.16
SSBP4-201ENST00000270061 HCG22E2RYF7 251 aa14.02□□□□□ -0.16
SSBP4-201ENST00000270061 SERP2Q8N6R1 65 aa14.02□□□□□ -0.16
SSBP4-201ENST00000270061 LIMD2Q9BT23 127 aa14.02□□□□□ -0.16
SSBP4-201ENST00000270061 SPAG11AQ6PDA7 123 aa14.01□□□□□ -0.17
SSBP4-201ENST00000270061 RNF213Q63HN8 5207 aa14.01□□□□□ -0.17
SSBP4-201ENST00000270061 COX7CP15954 63 aa13.99□□□□□ -0.17
SSBP4-201ENST00000270061 RPS29P62273 56 aaKnown RBP13.99□□□□□ -0.17
SSBP4-201ENST00000270061 CCDC179H3BU77 68 aa13.98□□□□□ -0.17
SSBP4-201ENST00000270061 TRAV7A0A075B6U4 112 aa13.96□□□□□ -0.17
SSBP4-201ENST00000270061 UQCRQO14949 82 aa13.96□□□□□ -0.18
SSBP4-201ENST00000270061 A0A1B0GVX0 72 aa13.94□□□□□ -0.18
SSBP4-201ENST00000270061 C1orf195Q5TG92 126 aa13.94□□□□□ -0.18
SSBP4-201ENST00000270061 MMP24-AS1A0A0U1RRL7 71 aa13.91□□□□□ -0.18
SSBP4-201ENST00000270061 OCR1Q9BZK8 76 aa13.91□□□□□ -0.18
SSBP4-201ENST00000270061 CASC2Q6XLA1 102 aa13.9□□□□□ -0.18
SSBP4-201ENST00000270061 WFDC13Q8IUB5 93 aa13.9□□□□□ -0.18
SSBP4-201ENST00000270061 C8orf17Q9NRJ1 99 aa13.88□□□□□ -0.19
SSBP4-201ENST00000270061 IGHV6-1A0A0B4J1U7 121 aa13.87□□□□□ -0.19
SSBP4-201ENST00000270061 RETNLBQ9BQ08 111 aa13.87□□□□□ -0.19
SSBP4-201ENST00000270061 hDV103S1A0JD37 113 aa13.83□□□□□ -0.19
SSBP4-201ENST00000270061 C8orf87E5RJ46 101 aa13.79□□□□□ -0.2
SSBP4-201ENST00000270061 NOTCH2NLQ7Z3S9 236 aa13.76□□□□□ -0.21
SSBP4-201ENST00000270061 TMEM254Q8TBM7 123 aa13.76□□□□□ -0.21
SSBP4-201ENST00000270061 IGLV7-46A0A075B6I9 117 aa13.73□□□□□ -0.21
SSBP4-201ENST00000270061 MRPL34Q9BQ48 92 aaKnown RBP13.71□□□□□ -0.21
SSBP4-201ENST00000270061 LINC00313P59037 77 aa13.7□□□□□ -0.22
SSBP4-201ENST00000270061 C20orf197Q8N268 126 aa13.7□□□□□ -0.22
SSBP4-201ENST00000270061 TPRXLQ17RH7 258 aa13.69□□□□□ -0.22
SSBP4-201ENST00000270061 C5orf47Q569G3 176 aa13.68□□□□□ -0.22
SSBP4-201ENST00000270061 KLKP1Q107X0 134 aa13.66□□□□□ -0.22
SSBP4-201ENST00000270061 FP248Q71RG6 208 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-201ENST00000270061 TP53AIP1Q9HCN2 124 aa13.66□□□□□ -0.22
SSBP4-201ENST00000270061 MUC2Q02817 5179 aa13.64□□□□□ -0.23
SSBP4-201ENST00000270061 A0A0U1RQV1 116 aa13.6□□□□□ -0.23
SSBP4-201ENST00000270061 CYSTM1Q9H1C7 97 aa13.6□□□□□ -0.23
SSBP4-201ENST00000270061 SNURFQ9Y675 71 aa13.58□□□□□ -0.24
SSBP4-201ENST00000270061 KRTAP16-1A8MUX0 517 aa13.57□□□□□ -0.24
SSBP4-201ENST00000270061 NDUFS5O43920 106 aa13.56□□□□□ -0.24
SSBP4-201ENST00000270061 Q8N9P0 234 aaPredicted RBP13.55□□□□□ -0.24
SSBP4-201ENST00000270061 MP68P56378 58 aa13.54□□□□□ -0.24
SSBP4-201ENST00000270061 H3BPC8 53 aa13.53□□□□□ -0.24
SSBP4-201ENST00000270061 TRAV22A0A0B4J277 110 aa13.51□□□□□ -0.25
SSBP4-201ENST00000270061 H0Y9P7 68 aa13.51□□□□□ -0.25
SSBP4-201ENST00000270061 NDUFC1O43677 76 aa13.51□□□□□ -0.25
SSBP4-201ENST00000270061 ZCCHC13Q8WW36 166 aaKnown RBP13.51□□□□□ -0.25
SSBP4-201ENST00000270061 KRTAP13-3Q3SY46 172 aa13.5□□□□□ -0.25
SSBP4-201ENST00000270061 MUC17Q685J3 4493 aa13.48□□□□□ -0.25
SSBP4-201ENST00000270061 H7BZZ5 65 aa13.48□□□□□ -0.25
SSBP4-201ENST00000270061 TMEM258P61165 79 aa13.46□□□□□ -0.25
SSBP4-201ENST00000270061 LINC00208Q96KT6 92 aa13.44□□□□□ -0.26
SSBP4-201ENST00000270061 C1orf64Q8NEQ6 169 aa13.39□□□□□ -0.27
SSBP4-201ENST00000270061 Q5W150 140 aa13.38□□□□□ -0.27
SSBP4-201ENST00000270061 C9orf92A6NGG3 77 aa13.33□□□□□ -0.28
SSBP4-201ENST00000270061 C20orf166-AS1Q96NR2 134 aa13.3□□□□□ -0.28
SSBP4-201ENST00000270061 A8MUU9 505 aa13.28□□□□□ -0.28
SSBP4-201ENST00000270061 LOC101927531A0A1B0GV80 90 aa13.27□□□□□ -0.29
SSBP4-201ENST00000270061 SEC61BP60468 96 aaKnown RBP13.26□□□□□ -0.29
SSBP4-201ENST00000270061 FAM236DA0A1B0GTK5 79 aa13.25□□□□□ -0.29
SSBP4-201ENST00000270061 FAM236CP0DP71 79 aa13.25□□□□□ -0.29
SSBP4-201ENST00000270061 XP32Q5T750 250 aa13.25□□□□□ -0.29
SSBP4-201ENST00000270061 FAT4Q6V0I7 4981 aa13.25□□□□□ -0.29
SSBP4-201ENST00000270061 ATP5EP56381 51 aaPredicted RBP13.23□□□□□ -0.29
SSBP4-201ENST00000270061 RPS28P62857 69 aaKnown RBP13.22□□□□□ -0.29
SSBP4-201ENST00000270061 Q75L30 129 aa13.17□□□□□ -0.3
SSBP4-201ENST00000270061 CYP4F30PQ9H0H9 118 aa13.17□□□□□ -0.3
SSBP4-201ENST00000270061 SPANXA2-OT1Q8N9U9 137 aa13.16□□□□□ -0.3
SSBP4-201ENST00000270061 IGKV2-30P06310 120 aa13.15□□□□□ -0.3
SSBP4-201ENST00000270061 PCOTHQ58A44 107 aa13.11□□□□□ -0.31
SSBP4-201ENST00000270061 KRTAP4-1Q9BYQ7 146 aa13.09□□□□□ -0.31
SSBP4-201ENST00000270061 LCE2AQ5TA79 106 aaPredicted RBP13.06□□□□□ -0.32
SSBP4-201ENST00000270061 SERP1Q9Y6X1 66 aa13.04□□□□□ -0.32
SSBP4-201ENST00000270061 IGKV2D-30A0A075B6S6 120 aa13.01□□□□□ -0.33
SSBP4-201ENST00000270061 RPL37P61927 97 aaKnown RBP13.01□□□□□ -0.33
SSBP4-201ENST00000270061 C7orf65Q6ZTY9 151 aa12.99□□□□□ -0.33
SSBP4-201ENST00000270061 HRES1P13985 223 aa12.94□□□□□ -0.34
SSBP4-201ENST00000270061 ATP11AUNQ6ZP68 121 aa12.94□□□□□ -0.34
SSBP4-201ENST00000270061 SPINK7P58062 85 aa12.84□□□□□ -0.35
SSBP4-201ENST00000270061 DMAC1Q96GE9 116 aa12.79□□□□□ -0.36
SSBP4-201ENST00000270061 SMIM26A0A096LP01 95 aa12.77□□□□□ -0.36
SSBP4-201ENST00000270061 LCE2CQ5TA81 110 aa12.74□□□□□ -0.37
SSBP4-201ENST00000270061 ACYP2P14621 99 aa12.73□□□□□ -0.37
SSBP4-201ENST00000270061 KRTAP19-2Q3LHN2 52 aa12.73□□□□□ -0.37
SSBP4-201ENST00000270061 COA5Q86WW8 74 aa12.72□□□□□ -0.37
SSBP4-201ENST00000270061 C4orf26Q17RF5 130 aa12.67□□□□□ -0.38
SSBP4-201ENST00000270061 A8MUN3 132 aa12.66□□□□□ -0.38
SSBP4-201ENST00000270061 KRTAP9-2Q9BYQ4 174 aa12.65□□□□□ -0.38
SSBP4-201ENST00000270061 MT1HP80294 61 aa12.58□□□□□ -0.39
SSBP4-201ENST00000270061 COX6B2Q6YFQ2 88 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms