RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 OCR1Q9BZK8 76 aa9.87□□□□□ -0.83
SDCBP-201ENST00000260130 A0A1W2PNM2 257 aa9.87□□□□□ -0.83
SDCBP-201ENST00000260130 KRTAP13-2Q52LG2 175 aa9.87□□□□□ -0.83
SDCBP-201ENST00000260130 Q8NBF4 154 aa9.87□□□□□ -0.83
SDCBP-201ENST00000260130 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
SDCBP-201ENST00000260130 C4orf26Q17RF5 130 aa9.85□□□□□ -0.83
SDCBP-201ENST00000260130 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
SDCBP-201ENST00000260130 A0A0U1RQV1 116 aa9.81□□□□□ -0.84
SDCBP-201ENST00000260130 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
SDCBP-201ENST00000260130 HRCT1Q6UXD1 115 aa9.8□□□□□ -0.84
SDCBP-201ENST00000260130 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
SDCBP-201ENST00000260130 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
SDCBP-201ENST00000260130 DSCR10P59022 87 aa9.74□□□□□ -0.85
SDCBP-201ENST00000260130 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
SDCBP-201ENST00000260130 SPRR1BP22528 89 aa9.71□□□□□ -0.85
SDCBP-201ENST00000260130 K7EQZ3 153 aa9.7□□□□□ -0.86
SDCBP-201ENST00000260130 FP248Q71RG6 208 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-201ENST00000260130 MOBPQ13875 183 aa9.7□□□□□ -0.86
SDCBP-201ENST00000260130 IGFL1Q6UW32 110 aa9.7□□□□□ -0.86
SDCBP-201ENST00000260130 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
SDCBP-201ENST00000260130 IGLV8-61A0A075B6I0 122 aa9.69□□□□□ -0.86
SDCBP-201ENST00000260130 SPAG11AQ6PDA7 123 aa9.69□□□□□ -0.86
SDCBP-201ENST00000260130 HCG22E2RYF7 251 aa9.68□□□□□ -0.86
SDCBP-201ENST00000260130 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
SDCBP-201ENST00000260130 LRP2P98164 4655 aa9.64□□□□□ -0.87
SDCBP-201ENST00000260130 PRR4Q16378 134 aa9.64□□□□□ -0.87
SDCBP-201ENST00000260130 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
SDCBP-201ENST00000260130 A0A087WSZ3 146 aa9.62□□□□□ -0.87
SDCBP-201ENST00000260130 A0A0G2JQZ4 141 aa9.62□□□□□ -0.87
SDCBP-201ENST00000260130 SPINK1P00995 79 aa9.62□□□□□ -0.87
SDCBP-201ENST00000260130 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
SDCBP-201ENST00000260130 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
SDCBP-201ENST00000260130 LPAP08519 4548 aa9.58□□□□□ -0.88
SDCBP-201ENST00000260130 DEFB116Q30KQ4 102 aa9.58□□□□□ -0.88
SDCBP-201ENST00000260130 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
SDCBP-201ENST00000260130 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
SDCBP-201ENST00000260130 WFDC13Q8IUB5 93 aa9.56□□□□□ -0.88
SDCBP-201ENST00000260130 NDUFB1O75438 58 aa9.55□□□□□ -0.88
SDCBP-201ENST00000260130 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
SDCBP-201ENST00000260130 MP68P56378 58 aa9.54□□□□□ -0.88
SDCBP-201ENST00000260130 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
SDCBP-201ENST00000260130 PRR15Q8IV56 129 aa9.5□□□□□ -0.89
SDCBP-201ENST00000260130 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
SDCBP-201ENST00000260130 CYP4F30PQ9H0H9 118 aa9.5□□□□□ -0.89
SDCBP-201ENST00000260130 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
SDCBP-201ENST00000260130 A8MWP4 228 aa9.49□□□□□ -0.89
SDCBP-201ENST00000260130 CD164Q04900 197 aa9.49□□□□□ -0.89
SDCBP-201ENST00000260130 CASC2Q6XLA1 102 aa9.49□□□□□ -0.89
SDCBP-201ENST00000260130 LINC00472Q9H8W2 130 aa9.48□□□□□ -0.89
SDCBP-201ENST00000260130 H3BPC8 53 aa9.48□□□□□ -0.89
SDCBP-201ENST00000260130 TRAV22A0A0B4J277 110 aa9.47□□□□□ -0.89
SDCBP-201ENST00000260130 LIMD2Q9BT23 127 aa9.46□□□□□ -0.9
SDCBP-201ENST00000260130 LINC00208Q96KT6 92 aa9.45□□□□□ -0.9
SDCBP-201ENST00000260130 H0Y9P7 68 aa9.44□□□□□ -0.9
SDCBP-201ENST00000260130 Q1T7F1 81 aa9.43□□□□□ -0.9
SDCBP-201ENST00000260130 BRK1Q8WUW1 75 aa9.43□□□□□ -0.9
SDCBP-201ENST00000260130 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
SDCBP-201ENST00000260130 SPANXA2-OT1Q8N9U9 137 aa9.4□□□□□ -0.9
SDCBP-201ENST00000260130 MMP24-AS1A0A0U1RRL7 71 aa9.37□□□□□ -0.91
SDCBP-201ENST00000260130 KRTAP13-3Q3SY46 172 aa9.35□□□□□ -0.91
SDCBP-201ENST00000260130 V9GYY9 64 aa9.34□□□□□ -0.91
SDCBP-201ENST00000260130 RNF213Q63HN8 5207 aa9.34□□□□□ -0.91
SDCBP-201ENST00000260130 Q96NJ1 140 aa9.31□□□□□ -0.92
SDCBP-201ENST00000260130 C1orf195Q5TG92 126 aa9.31□□□□□ -0.92
SDCBP-201ENST00000260130 TP53AIP1Q9HCN2 124 aa9.31□□□□□ -0.92
SDCBP-201ENST00000260130 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
SDCBP-201ENST00000260130 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.93
SDCBP-201ENST00000260130 PSPHP1O15172 72 aa9.26□□□□□ -0.93
SDCBP-201ENST00000260130 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
SDCBP-201ENST00000260130 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
SDCBP-201ENST00000260130 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
SDCBP-201ENST00000260130 MUC2Q02817 5179 aa9.2□□□□□ -0.94
SDCBP-201ENST00000260130 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
SDCBP-201ENST00000260130 A8MUN3 132 aa9.19□□□□□ -0.94
SDCBP-201ENST00000260130 XP32Q5T750 250 aa9.19□□□□□ -0.94
SDCBP-201ENST00000260130 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-201ENST00000260130 NDUFS5O43920 106 aa9.18□□□□□ -0.94
SDCBP-201ENST00000260130 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
SDCBP-201ENST00000260130 COA5Q86WW8 74 aa9.17□□□□□ -0.94
SDCBP-201ENST00000260130 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
SDCBP-201ENST00000260130 Q5VV11 94 aa9.14□□□□□ -0.95
SDCBP-201ENST00000260130 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
SDCBP-201ENST00000260130 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
SDCBP-201ENST00000260130 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
SDCBP-201ENST00000260130 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
SDCBP-201ENST00000260130 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
SDCBP-201ENST00000260130 Q75L30 129 aa9.05□□□□□ -0.96
SDCBP-201ENST00000260130 C8orf87E5RJ46 101 aa9.02□□□□□ -0.97
SDCBP-201ENST00000260130 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
SDCBP-201ENST00000260130 LINC01558Q9Y6Z2 57 aa9□□□□□ -0.97
SDCBP-201ENST00000260130 HRES1P13985 223 aa9□□□□□ -0.97
SDCBP-201ENST00000260130 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
SDCBP-201ENST00000260130 A6NED7 52 aa8.97□□□□□ -0.97
SDCBP-201ENST00000260130 PMAIP1Q13794 54 aa8.97□□□□□ -0.97
SDCBP-201ENST00000260130 Q5W150 140 aa8.97□□□□□ -0.97
SDCBP-201ENST00000260130 A8MU10 97 aa8.93□□□□□ -0.98
SDCBP-201ENST00000260130 FAT4Q6V0I7 4981 aa8.93□□□□□ -0.98
SDCBP-201ENST00000260130 LINC00313P59037 77 aa8.92□□□□□ -0.98
SDCBP-201ENST00000260130 ACYP2P14621 99 aa8.9□□□□□ -0.98
SDCBP-201ENST00000260130 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms