RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
HOXC6-201ENST00000243108 FAM229BQ4G0N7 80 aa10.07□□□□□ -0.8
HOXC6-201ENST00000243108 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
HOXC6-201ENST00000243108 SS18L2Q9UHA2 77 aa10.07□□□□□ -0.8
HOXC6-201ENST00000243108 HRCT1Q6UXD1 115 aa10.05□□□□□ -0.8
HOXC6-201ENST00000243108 Q96NJ1 140 aa10.05□□□□□ -0.8
HOXC6-201ENST00000243108 J3KT08 172 aa10.04□□□□□ -0.8
HOXC6-201ENST00000243108 CD164Q04900 197 aa10.04□□□□□ -0.8
HOXC6-201ENST00000243108 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
HOXC6-201ENST00000243108 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
HOXC6-201ENST00000243108 A8MWP4 228 aa10.03□□□□□ -0.8
HOXC6-201ENST00000243108 KRTAP13-2Q52LG2 175 aa10.02□□□□□ -0.8
HOXC6-201ENST00000243108 PRR15Q8IV56 129 aa10.01□□□□□ -0.81
HOXC6-201ENST00000243108 HCG22E2RYF7 251 aa10□□□□□ -0.81
HOXC6-201ENST00000243108 OCR1Q9BZK8 76 aa10□□□□□ -0.81
HOXC6-201ENST00000243108 TYMSOSQ8TAI1 123 aa9.97□□□□□ -0.81
HOXC6-201ENST00000243108 PRR4Q16378 134 aa9.96□□□□□ -0.82
HOXC6-201ENST00000243108 NDUFB1O75438 58 aa9.93□□□□□ -0.82
HOXC6-201ENST00000243108 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
HOXC6-201ENST00000243108 CYSTM1Q9H1C7 97 aa9.93□□□□□ -0.82
HOXC6-201ENST00000243108 C20orf197Q8N268 126 aa9.92□□□□□ -0.82
HOXC6-201ENST00000243108 Q5XG85 94 aa9.9□□□□□ -0.82
HOXC6-201ENST00000243108 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.82
HOXC6-201ENST00000243108 MMP24-AS1A0A0U1RRL7 71 aa9.9□□□□□ -0.83
HOXC6-201ENST00000243108 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
HOXC6-201ENST00000243108 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
HOXC6-201ENST00000243108 MUC2Q02817 5179 aa9.88□□□□□ -0.83
HOXC6-201ENST00000243108 SVIPQ8NHG7 77 aa9.87□□□□□ -0.83
HOXC6-201ENST00000243108 A0A1B0GVX0 72 aa9.87□□□□□ -0.83
HOXC6-201ENST00000243108 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
HOXC6-201ENST00000243108 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
HOXC6-201ENST00000243108 TMEM254Q8TBM7 123 aa9.85□□□□□ -0.83
HOXC6-201ENST00000243108 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
HOXC6-201ENST00000243108 hDV103S1A0JD37 113 aa9.82□□□□□ -0.84
HOXC6-201ENST00000243108 SNURFQ9Y675 71 aa9.82□□□□□ -0.84
HOXC6-201ENST00000243108 A0A0U1RQV1 116 aa9.82□□□□□ -0.84
HOXC6-201ENST00000243108 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
HOXC6-201ENST00000243108 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
HOXC6-201ENST00000243108 TMEM258P61165 79 aa9.8□□□□□ -0.84
HOXC6-201ENST00000243108 H7BZZ5 65 aa9.79□□□□□ -0.84
HOXC6-201ENST00000243108 C5orf47Q569G3 176 aa9.79□□□□□ -0.84
HOXC6-201ENST00000243108 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
HOXC6-201ENST00000243108 SPINK1P00995 79 aa9.78□□□□□ -0.84
HOXC6-201ENST00000243108 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
HOXC6-201ENST00000243108 NDUFC1O43677 76 aa9.76□□□□□ -0.85
HOXC6-201ENST00000243108 RPS29P62273 56 aaKnown RBP9.75□□□□□ -0.85
HOXC6-201ENST00000243108 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
HOXC6-201ENST00000243108 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
HOXC6-201ENST00000243108 SPAG11AQ6PDA7 123 aa9.73□□□□□ -0.85
HOXC6-201ENST00000243108 ZCCHC13Q8WW36 166 aaKnown RBP9.73□□□□□ -0.85
HOXC6-201ENST00000243108 MUC17Q685J3 4493 aa9.72□□□□□ -0.85
HOXC6-201ENST00000243108 MRPL34Q9BQ48 92 aaKnown RBP9.72□□□□□ -0.85
HOXC6-201ENST00000243108 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
HOXC6-201ENST00000243108 TP53AIP1Q9HCN2 124 aa9.7□□□□□ -0.86
HOXC6-201ENST00000243108 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
HOXC6-201ENST00000243108 MP68P56378 58 aa9.68□□□□□ -0.86
HOXC6-201ENST00000243108 H0Y9P7 68 aa9.67□□□□□ -0.86
HOXC6-201ENST00000243108 H3BPC8 53 aa9.67□□□□□ -0.86
HOXC6-201ENST00000243108 FAM236DA0A1B0GTK5 79 aa9.65□□□□□ -0.86
HOXC6-201ENST00000243108 FAM236CP0DP71 79 aa9.65□□□□□ -0.86
HOXC6-201ENST00000243108 TRAV22A0A0B4J277 110 aa9.65□□□□□ -0.87
HOXC6-201ENST00000243108 LINC00313P59037 77 aa9.64□□□□□ -0.87
HOXC6-201ENST00000243108 LINC00208Q96KT6 92 aa9.62□□□□□ -0.87
HOXC6-201ENST00000243108 NDUFS5O43920 106 aa9.62□□□□□ -0.87
HOXC6-201ENST00000243108 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
HOXC6-201ENST00000243108 ATP5EP56381 51 aaPredicted RBP9.6□□□□□ -0.87
HOXC6-201ENST00000243108 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
HOXC6-201ENST00000243108 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
HOXC6-201ENST00000243108 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
HOXC6-201ENST00000243108 KRTAP13-3Q3SY46 172 aa9.58□□□□□ -0.88
HOXC6-201ENST00000243108 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
HOXC6-201ENST00000243108 C1orf64Q8NEQ6 169 aa9.57□□□□□ -0.88
HOXC6-201ENST00000243108 Q5W150 140 aa9.51□□□□□ -0.89
HOXC6-201ENST00000243108 SERP1Q9Y6X1 66 aa9.5□□□□□ -0.89
HOXC6-201ENST00000243108 LCE2AQ5TA79 106 aaPredicted RBP9.48□□□□□ -0.89
HOXC6-201ENST00000243108 SPANXA2-OT1Q8N9U9 137 aa9.46□□□□□ -0.89
HOXC6-201ENST00000243108 LOC101927531A0A1B0GV80 90 aa9.44□□□□□ -0.9
HOXC6-201ENST00000243108 KRTAP4-1Q9BYQ7 146 aa9.44□□□□□ -0.9
HOXC6-201ENST00000243108 CYP4F30PQ9H0H9 118 aa9.44□□□□□ -0.9
HOXC6-201ENST00000243108 XP32Q5T750 250 aa9.38□□□□□ -0.91
HOXC6-201ENST00000243108 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
HOXC6-201ENST00000243108 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
HOXC6-201ENST00000243108 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.92
HOXC6-201ENST00000243108 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
HOXC6-201ENST00000243108 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
HOXC6-201ENST00000243108 A8MUU9 505 aa9.32□□□□□ -0.92
HOXC6-201ENST00000243108 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
HOXC6-201ENST00000243108 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
HOXC6-201ENST00000243108 HRES1P13985 223 aa9.22□□□□□ -0.93
HOXC6-201ENST00000243108 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.94
HOXC6-201ENST00000243108 Q75L30 129 aa9.21□□□□□ -0.94
HOXC6-201ENST00000243108 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
HOXC6-201ENST00000243108 KRTAP19-2Q3LHN2 52 aa9.19□□□□□ -0.94
HOXC6-201ENST00000243108 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
HOXC6-201ENST00000243108 COA5Q86WW8 74 aa9.17□□□□□ -0.94
HOXC6-201ENST00000243108 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
HOXC6-201ENST00000243108 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
HOXC6-201ENST00000243108 ACYP2P14621 99 aa9.08□□□□□ -0.96
HOXC6-201ENST00000243108 C4orf26Q17RF5 130 aa9.07□□□□□ -0.96
HOXC6-201ENST00000243108 Q1T7F1 81 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms