RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 M0R2T5 61 aa7.54□□□□□ -1.2
DDX39A-201ENST00000242776 SS18L2Q9UHA2 77 aa7.54□□□□□ -1.2
DDX39A-201ENST00000242776 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
DDX39A-201ENST00000242776 A0A1B0GW54 56 aa7.52□□□□□ -1.21
DDX39A-201ENST00000242776 Q5XG85 94 aa7.52□□□□□ -1.21
DDX39A-201ENST00000242776 A0A087WSZ3 146 aa7.51□□□□□ -1.21
DDX39A-201ENST00000242776 KRTAP9-7A8MTY7 169 aa7.46□□□□□ -1.22
DDX39A-201ENST00000242776 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
DDX39A-201ENST00000242776 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
DDX39A-201ENST00000242776 FLGP20930 4061 aaPredicted RBP7.41□□□□□ -1.22
DDX39A-201ENST00000242776 C1orf195Q5TG92 126 aa7.41□□□□□ -1.22
DDX39A-201ENST00000242776 NREPQ16612 68 aa7.4□□□□□ -1.22
DDX39A-201ENST00000242776 J3QR89 54 aa7.39□□□□□ -1.23
DDX39A-201ENST00000242776 ACYP1P07311 99 aa7.39□□□□□ -1.23
DDX39A-201ENST00000242776 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
DDX39A-201ENST00000242776 FAM240AA0A1B0GVK7 77 aa7.37□□□□□ -1.23
DDX39A-201ENST00000242776 Q96NJ1 140 aa7.37□□□□□ -1.23
DDX39A-201ENST00000242776 J3KT08 172 aa7.36□□□□□ -1.23
DDX39A-201ENST00000242776 LINC00472Q9H8W2 130 aa7.36□□□□□ -1.23
DDX39A-201ENST00000242776 IGKV4-1P06312 121 aa7.36□□□□□ -1.23
DDX39A-201ENST00000242776 SIGMAR1Q99720 223 aa7.36□□□□□ -1.23
DDX39A-201ENST00000242776 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
DDX39A-201ENST00000242776 Q6ZVQ6 151 aa7.35□□□□□ -1.23
DDX39A-201ENST00000242776 DEFB116Q30KQ4 102 aa7.32□□□□□ -1.24
DDX39A-201ENST00000242776 BPY2O14599 106 aa7.3□□□□□ -1.24
DDX39A-201ENST00000242776 K7ERU9 68 aa7.3□□□□□ -1.24
DDX39A-201ENST00000242776 NDUFB1O75438 58 aa7.3□□□□□ -1.24
DDX39A-201ENST00000242776 RPL37P61927 97 aaKnown RBP7.29□□□□□ -1.24
DDX39A-201ENST00000242776 A8MWP4 228 aa7.27□□□□□ -1.25
DDX39A-201ENST00000242776 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
DDX39A-201ENST00000242776 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
DDX39A-201ENST00000242776 CXCL6P80162 114 aa7.24□□□□□ -1.25
DDX39A-201ENST00000242776 IGHV6-1A0A0B4J1U7 121 aa7.24□□□□□ -1.25
DDX39A-201ENST00000242776 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
DDX39A-201ENST00000242776 ATP5EP2Q5VTU8 51 aa7.24□□□□□ -1.25
DDX39A-201ENST00000242776 USH2AO75445 5202 aa7.23□□□□□ -1.25
DDX39A-201ENST00000242776 DSCR10P59022 87 aa7.23□□□□□ -1.25
DDX39A-201ENST00000242776 LINC00313P59037 77 aa7.22□□□□□ -1.25
DDX39A-201ENST00000242776 LINC00643Q86TS7 51 aa7.22□□□□□ -1.25
DDX39A-201ENST00000242776 PRR15Q8IV56 129 aa7.22□□□□□ -1.25
DDX39A-201ENST00000242776 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
DDX39A-201ENST00000242776 K7EQZ3 153 aa7.2□□□□□ -1.26
DDX39A-201ENST00000242776 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
DDX39A-201ENST00000242776 Q8N9L7 120 aa7.17□□□□□ -1.26
DDX39A-201ENST00000242776 KRTAP9-8Q9BYQ0 159 aa7.15□□□□□ -1.27
DDX39A-201ENST00000242776 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
DDX39A-201ENST00000242776 NOTCH2NLQ7Z3S9 236 aa7.14□□□□□ -1.27
DDX39A-201ENST00000242776 MMP24-AS1A0A0U1RRL7 71 aa7.13□□□□□ -1.27
DDX39A-201ENST00000242776 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
DDX39A-201ENST00000242776 SYNE2Q8WXH0 6885 aaKnown RBP7.11□□□□□ -1.27
DDX39A-201ENST00000242776 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
DDX39A-201ENST00000242776 HIST1H4AP62805 103 aaKnown RBP7.11□□□□□ -1.27
DDX39A-201ENST00000242776 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
DDX39A-201ENST00000242776 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
DDX39A-201ENST00000242776 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
DDX39A-201ENST00000242776 Q75L30 129 aa7.11□□□□□ -1.27
DDX39A-201ENST00000242776 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
DDX39A-201ENST00000242776 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
DDX39A-201ENST00000242776 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
DDX39A-201ENST00000242776 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
DDX39A-201ENST00000242776 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
DDX39A-201ENST00000242776 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
DDX39A-201ENST00000242776 A8MUU9 505 aa7.08□□□□□ -1.28
DDX39A-201ENST00000242776 Q8N9P0 234 aaPredicted RBP7.05□□□□□ -1.28
DDX39A-201ENST00000242776 IMUPQ9GZP8 106 aa7.04□□□□□ -1.28
DDX39A-201ENST00000242776 NDUFS5O43920 106 aa7.04□□□□□ -1.28
DDX39A-201ENST00000242776 LCE2BO14633 110 aa7.03□□□□□ -1.28
DDX39A-201ENST00000242776 MT2AP02795 61 aa7.03□□□□□ -1.28
DDX39A-201ENST00000242776 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
DDX39A-201ENST00000242776 A0A087WVE0 104 aa7.02□□□□□ -1.29
DDX39A-201ENST00000242776 MT1FP04733 61 aa6.98□□□□□ -1.29
DDX39A-201ENST00000242776 ZCCHC13Q8WW36 166 aaKnown RBP6.97□□□□□ -1.29
DDX39A-201ENST00000242776 TP53AIP1Q9HCN2 124 aa6.97□□□□□ -1.29
DDX39A-201ENST00000242776 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
DDX39A-201ENST00000242776 FAM236DA0A1B0GTK5 79 aa6.94□□□□□ -1.3
DDX39A-201ENST00000242776 FAM236CP0DP71 79 aa6.94□□□□□ -1.3
DDX39A-201ENST00000242776 SCGB1A1P11684 91 aa6.92□□□□□ -1.3
DDX39A-201ENST00000242776 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
DDX39A-201ENST00000242776 FAM236AA0A1B0GUQ0 79 aa6.9□□□□□ -1.31
DDX39A-201ENST00000242776 FAM236BA0A1B0GV22 79 aa6.9□□□□□ -1.31
DDX39A-201ENST00000242776 UQCRQO14949 82 aa6.88□□□□□ -1.31
DDX39A-201ENST00000242776 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
DDX39A-201ENST00000242776 Q5W150 140 aa6.85□□□□□ -1.31
DDX39A-201ENST00000242776 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
DDX39A-201ENST00000242776 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
DDX39A-201ENST00000242776 ATOX1O00244 68 aa6.84□□□□□ -1.31
DDX39A-201ENST00000242776 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
DDX39A-201ENST00000242776 H0Y9P7 68 aa6.81□□□□□ -1.32
DDX39A-201ENST00000242776 SPINK7P58062 85 aa6.8□□□□□ -1.32
DDX39A-201ENST00000242776 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
DDX39A-201ENST00000242776 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
DDX39A-201ENST00000242776 MP68P56378 58 aa6.79□□□□□ -1.32
DDX39A-201ENST00000242776 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
DDX39A-201ENST00000242776 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
DDX39A-201ENST00000242776 C5orf47Q569G3 176 aa6.79□□□□□ -1.32
DDX39A-201ENST00000242776 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
DDX39A-201ENST00000242776 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
DDX39A-201ENST00000242776 HRES1P13985 223 aa6.76□□□□□ -1.33
DDX39A-201ENST00000242776 H3BPC8 53 aa6.75□□□□□ -1.33
DDX39A-201ENST00000242776 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms