RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 STAB1Q9NY15 2570 aa10.06□□□□□ -0.8
LINC02228-204ENST00000642115 CASC10Q5T4H9 136 aa10.05□□□□□ -0.8
LINC02228-204ENST00000642115 Q6ZRX8 168 aa10.05□□□□□ -0.8
LINC02228-204ENST00000642115 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
LINC02228-204ENST00000642115 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
LINC02228-204ENST00000642115 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
LINC02228-204ENST00000642115 COL6A5A8TX70 2615 aa10.03□□□□□ -0.8
LINC02228-204ENST00000642115 A6NED7 52 aa10.03□□□□□ -0.8
LINC02228-204ENST00000642115 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
LINC02228-204ENST00000642115 A6NN06 94 aa10.02□□□□□ -0.81
LINC02228-204ENST00000642115 LINC01556Q5JQF7 62 aa9.99□□□□□ -0.81
LINC02228-204ENST00000642115 SPANXA2-OT1Q8N9U9 137 aa9.99□□□□□ -0.81
LINC02228-204ENST00000642115 SRRM2Q9UQ35 2752 aaKnown RBP9.99□□□□□ -0.81
LINC02228-204ENST00000642115 IGLV1-50A0A075B6I6 118 aa9.99□□□□□ -0.81
LINC02228-204ENST00000642115 Q75L30 129 aa9.99□□□□□ -0.81
LINC02228-204ENST00000642115 NDUFS5O43920 106 aa9.98□□□□□ -0.81
LINC02228-204ENST00000642115 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
LINC02228-204ENST00000642115 PHF5AQ7RTV0 110 aaKnown RBP9.98□□□□□ -0.81
LINC02228-204ENST00000642115 H0Y9P7 68 aa9.98□□□□□ -0.81
LINC02228-204ENST00000642115 C11orf45Q8TAV5 145 aa9.97□□□□□ -0.81
LINC02228-204ENST00000642115 KRTAP4-16G5E9R7 235 aaPredicted RBP9.97□□□□□ -0.81
LINC02228-204ENST00000642115 KRTAP10-11P60412 298 aa9.96□□□□□ -0.82
LINC02228-204ENST00000642115 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
LINC02228-204ENST00000642115 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
LINC02228-204ENST00000642115 NBEAL1Q6ZS30 2694 aa9.95□□□□□ -0.82
LINC02228-204ENST00000642115 LINC00476Q8WZB0 136 aa9.95□□□□□ -0.82
LINC02228-204ENST00000642115 LOC101927531A0A1B0GV80 90 aa9.94□□□□□ -0.82
LINC02228-204ENST00000642115 H3BNG1 76 aa9.94□□□□□ -0.82
LINC02228-204ENST00000642115 PRLHP81277 87 aa9.94□□□□□ -0.82
LINC02228-204ENST00000642115 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
LINC02228-204ENST00000642115 COA5Q86WW8 74 aa9.93□□□□□ -0.82
LINC02228-204ENST00000642115 ANK2Q01484 3957 aa9.93□□□□□ -0.82
LINC02228-204ENST00000642115 A0A087WSZ3 146 aa9.93□□□□□ -0.82
LINC02228-204ENST00000642115 CSMD3Q7Z407 3707 aa9.92□□□□□ -0.82
LINC02228-204ENST00000642115 CDC42SE1Q9NRR8 79 aa9.92□□□□□ -0.82
LINC02228-204ENST00000642115 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
LINC02228-204ENST00000642115 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
LINC02228-204ENST00000642115 MOBPQ13875 183 aa9.9□□□□□ -0.83
LINC02228-204ENST00000642115 A0A096LNI7 61 aa9.89□□□□□ -0.83
LINC02228-204ENST00000642115 SPRR1AP35321 89 aa9.89□□□□□ -0.83
LINC02228-204ENST00000642115 REG3GQ6UW15 175 aa9.89□□□□□ -0.83
LINC02228-204ENST00000642115 C7orf65Q6ZTY9 151 aa9.89□□□□□ -0.83
LINC02228-204ENST00000642115 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
LINC02228-204ENST00000642115 H3BPC8 53 aa9.87□□□□□ -0.83
LINC02228-204ENST00000642115 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
LINC02228-204ENST00000642115 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
LINC02228-204ENST00000642115 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
LINC02228-204ENST00000642115 CNBPP62633 177 aaKnown RBP9.84□□□□□ -0.83
LINC02228-204ENST00000642115 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
LINC02228-204ENST00000642115 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
LINC02228-204ENST00000642115 SPINK7P58062 85 aa9.81□□□□□ -0.84
LINC02228-204ENST00000642115 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
LINC02228-204ENST00000642115 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
LINC02228-204ENST00000642115 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
LINC02228-204ENST00000642115 LINC01558Q9Y6Z2 57 aa9.8□□□□□ -0.84
LINC02228-204ENST00000642115 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
LINC02228-204ENST00000642115 PLAC8Q9NZF1 115 aa9.78□□□□□ -0.84
LINC02228-204ENST00000642115 COL7A1Q02388 2944 aa9.77□□□□□ -0.84
LINC02228-204ENST00000642115 MGAM2Q2M2H8 2515 aa9.76□□□□□ -0.85
LINC02228-204ENST00000642115 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
LINC02228-204ENST00000642115 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
LINC02228-204ENST00000642115 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
LINC02228-204ENST00000642115 H0Y9J4 135 aa9.75□□□□□ -0.85
LINC02228-204ENST00000642115 A8MWP4 228 aa9.74□□□□□ -0.85
LINC02228-204ENST00000642115 DNAH10Q8IVF4 4471 aa9.73□□□□□ -0.85
LINC02228-204ENST00000642115 PRAC1Q96KF2 57 aa9.72□□□□□ -0.85
LINC02228-204ENST00000642115 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
LINC02228-204ENST00000642115 KRTAP11-1Q8IUC1 163 aa9.7□□□□□ -0.86
LINC02228-204ENST00000642115 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
LINC02228-204ENST00000642115 LINC00313P59037 77 aa9.7□□□□□ -0.86
LINC02228-204ENST00000642115 MMP24-AS1A0A0U1RRL7 71 aa9.68□□□□□ -0.86
LINC02228-204ENST00000642115 HRES1P13985 223 aa9.67□□□□□ -0.86
LINC02228-204ENST00000642115 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
LINC02228-204ENST00000642115 LYSTQ99698 3801 aa9.66□□□□□ -0.86
LINC02228-204ENST00000642115 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
LINC02228-204ENST00000642115 KRTAP24-1Q3LI83 254 aa9.63□□□□□ -0.87
LINC02228-204ENST00000642115 IGLV9-49A0A0B4J1Y8 123 aa9.62□□□□□ -0.87
LINC02228-204ENST00000642115 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
LINC02228-204ENST00000642115 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
LINC02228-204ENST00000642115 DNAH1Q9P2D7 4330 aa9.57□□□□□ -0.88
LINC02228-204ENST00000642115 H3BS24 57 aa9.55□□□□□ -0.88
LINC02228-204ENST00000642115 Q6ZR54 194 aa9.54□□□□□ -0.88
LINC02228-204ENST00000642115 TP53AIP1Q9HCN2 124 aa9.54□□□□□ -0.88
LINC02228-204ENST00000642115 LINC01554Q52M75 96 aa9.54□□□□□ -0.88
LINC02228-204ENST00000642115 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
LINC02228-204ENST00000642115 PANO1I0J062 215 aa9.52□□□□□ -0.89
LINC02228-204ENST00000642115 ASB16-AS1Q495Z4 193 aa9.52□□□□□ -0.89
LINC02228-204ENST00000642115 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
LINC02228-204ENST00000642115 HUWE1Q7Z6Z7 4374 aaKnown RBP9.51□□□□□ -0.89
LINC02228-204ENST00000642115 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
LINC02228-204ENST00000642115 DNAH9Q9NYC9 4486 aa9.5□□□□□ -0.89
LINC02228-204ENST00000642115 K7EIL1 84 aa9.49□□□□□ -0.89
LINC02228-204ENST00000642115 ANAPC11Q9NYG5 84 aa9.49□□□□□ -0.89
LINC02228-204ENST00000642115 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
LINC02228-204ENST00000642115 SPRR1BP22528 89 aa9.48□□□□□ -0.89
LINC02228-204ENST00000642115 Q96NJ1 140 aa9.48□□□□□ -0.89
LINC02228-204ENST00000642115 MDFIQ99750 246 aa9.47□□□□□ -0.89
LINC02228-204ENST00000642115 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
LINC02228-204ENST00000642115 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
LINC02228-204ENST00000642115 C14orf177Q52M58 125 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms