RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 TNP2Q05952 138 aa9.26□□□□□ -0.93
SCARB2-221ENST00000640341 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-221ENST00000640341 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
SCARB2-221ENST00000640341 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
SCARB2-221ENST00000640341 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
SCARB2-221ENST00000640341 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
SCARB2-221ENST00000640341 IGFL1Q6UW32 110 aa9.24□□□□□ -0.93
SCARB2-221ENST00000640341 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
SCARB2-221ENST00000640341 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
SCARB2-221ENST00000640341 PRO0628Q9UI54 55 aa9.23□□□□□ -0.93
SCARB2-221ENST00000640341 UBE2AP49459 152 aa9.22□□□□□ -0.93
SCARB2-221ENST00000640341 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.94
SCARB2-221ENST00000640341 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
SCARB2-221ENST00000640341 HCG22E2RYF7 251 aa9.18□□□□□ -0.94
SCARB2-221ENST00000640341 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
SCARB2-221ENST00000640341 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
SCARB2-221ENST00000640341 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-221ENST00000640341 MDFIQ99750 246 aa9.16□□□□□ -0.94
SCARB2-221ENST00000640341 TGP01266 2768 aa9.14□□□□□ -0.95
SCARB2-221ENST00000640341 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
SCARB2-221ENST00000640341 A0A1B0GW54 56 aa9.12□□□□□ -0.95
SCARB2-221ENST00000640341 LINC00208Q96KT6 92 aa9.11□□□□□ -0.95
SCARB2-221ENST00000640341 DNAH1Q9P2D7 4330 aa9.11□□□□□ -0.95
SCARB2-221ENST00000640341 H0Y9J4 135 aa9.11□□□□□ -0.95
SCARB2-221ENST00000640341 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
SCARB2-221ENST00000640341 C1orf64Q8NEQ6 169 aa9.09□□□□□ -0.95
SCARB2-221ENST00000640341 PANO1I0J062 215 aa9.08□□□□□ -0.96
SCARB2-221ENST00000640341 DNAH3Q8TD57 4116 aa9.08□□□□□ -0.96
SCARB2-221ENST00000640341 MP68P56378 58 aa9.07□□□□□ -0.96
SCARB2-221ENST00000640341 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
SCARB2-221ENST00000640341 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
SCARB2-221ENST00000640341 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
SCARB2-221ENST00000640341 PSPHP1O15172 72 aa9.04□□□□□ -0.96
SCARB2-221ENST00000640341 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
SCARB2-221ENST00000640341 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
SCARB2-221ENST00000640341 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
SCARB2-221ENST00000640341 C14orf177Q52M58 125 aa9.02□□□□□ -0.96
SCARB2-221ENST00000640341 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
SCARB2-221ENST00000640341 H0Y9P7 68 aa9.01□□□□□ -0.97
SCARB2-221ENST00000640341 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
SCARB2-221ENST00000640341 ZCCHC13Q8WW36 166 aaKnown RBP9□□□□□ -0.97
SCARB2-221ENST00000640341 ANAPC11Q9NYG5 84 aa9□□□□□ -0.97
SCARB2-221ENST00000640341 LCE6AA0A183 80 aa8.99□□□□□ -0.97
SCARB2-221ENST00000640341 PRR15Q8IV56 129 aa8.99□□□□□ -0.97
SCARB2-221ENST00000640341 NBDYA0A0U1RRE5 68 aa8.98□□□□□ -0.97
SCARB2-221ENST00000640341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.98□□□□□ -0.97
SCARB2-221ENST00000640341 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
SCARB2-221ENST00000640341 A8MWP4 228 aa8.96□□□□□ -0.98
SCARB2-221ENST00000640341 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.98
SCARB2-221ENST00000640341 NDUFS5O43920 106 aa8.96□□□□□ -0.98
SCARB2-221ENST00000640341 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
SCARB2-221ENST00000640341 V9GYY9 64 aa8.95□□□□□ -0.98
SCARB2-221ENST00000640341 PCOTHQ58A44 107 aa8.95□□□□□ -0.98
SCARB2-221ENST00000640341 LINC00472Q9H8W2 130 aa8.94□□□□□ -0.98
SCARB2-221ENST00000640341 NDUFB1O75438 58 aa8.93□□□□□ -0.98
SCARB2-221ENST00000640341 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
SCARB2-221ENST00000640341 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
SCARB2-221ENST00000640341 MOBPQ13875 183 aa8.9□□□□□ -0.99
SCARB2-221ENST00000640341 SPRR1BP22528 89 aa8.89□□□□□ -0.99
SCARB2-221ENST00000640341 SPINK6Q6UWN8 80 aa8.89□□□□□ -0.99
SCARB2-221ENST00000640341 DNHD1Q96M86 4753 aa8.88□□□□□ -0.99
SCARB2-221ENST00000640341 A8MUN3 132 aa8.88□□□□□ -0.99
SCARB2-221ENST00000640341 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
SCARB2-221ENST00000640341 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
SCARB2-221ENST00000640341 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
SCARB2-221ENST00000640341 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
SCARB2-221ENST00000640341 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
SCARB2-221ENST00000640341 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
SCARB2-221ENST00000640341 NUPR2A6NF83 97 aa8.84□□□□□ -0.99
SCARB2-221ENST00000640341 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
SCARB2-221ENST00000640341 SEC61GP60059 68 aa8.83□□□□□ -1
SCARB2-221ENST00000640341 A0A087WTM6 91 aa8.82□□□□□ -1
SCARB2-221ENST00000640341 RTL8CO15255 209 aa8.82□□□□□ -1
SCARB2-221ENST00000640341 Q1T7F1 81 aa8.82□□□□□ -1
SCARB2-221ENST00000640341 KRTAP13-1Q8IUC0 172 aa8.82□□□□□ -1
SCARB2-221ENST00000640341 MEGF8Q7Z7M0 2845 aa8.81□□□□□ -1
SCARB2-221ENST00000640341 STARD9Q9P2P6 4700 aa8.81□□□□□ -1
SCARB2-221ENST00000640341 A8MU10 97 aa8.79□□□□□ -1
SCARB2-221ENST00000640341 A0A087X002 238 aa8.79□□□□□ -1
SCARB2-221ENST00000640341 NOTCH2NLQ7Z3S9 236 aa8.79□□□□□ -1
SCARB2-221ENST00000640341 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
SCARB2-221ENST00000640341 Q96NJ1 140 aa8.78□□□□□ -1
SCARB2-221ENST00000640341 PRR15LQ9BU68 103 aa8.78□□□□□ -1
SCARB2-221ENST00000640341 KMT2AQ03164 3969 aa8.78□□□□□ -1
SCARB2-221ENST00000640341 PMAIP1Q13794 54 aa8.78□□□□□ -1
SCARB2-221ENST00000640341 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
SCARB2-221ENST00000640341 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1
SCARB2-221ENST00000640341 SPTSSBQ8NFR3 76 aa8.77□□□□□ -1.01
SCARB2-221ENST00000640341 FBN3Q75N90 2809 aa8.76□□□□□ -1.01
SCARB2-221ENST00000640341 COA5Q86WW8 74 aa8.75□□□□□ -1.01
SCARB2-221ENST00000640341 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
SCARB2-221ENST00000640341 IGLV5-52A0A0A0MRZ9 124 aa8.74□□□□□ -1.01
SCARB2-221ENST00000640341 H3BPC8 53 aa8.74□□□□□ -1.01
SCARB2-221ENST00000640341 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
SCARB2-221ENST00000640341 CD164Q04900 197 aa8.73□□□□□ -1.01
SCARB2-221ENST00000640341 ZNF706Q9Y5V0 76 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-221ENST00000640341 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
SCARB2-221ENST00000640341 PRKDCP78527 4128 aaKnown RBP8.72□□□□□ -1.01
SCARB2-221ENST00000640341 ZNF861PO60384 105 aa8.72□□□□□ -1.01
SCARB2-221ENST00000640341 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms