RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 MRPL34Q9BQ48 92 aaKnown RBP1.76□□□□□ -2.13
RFC1-217ENST00000639695 RHPN1-AS1Q9BWJ2 59 aa1.76□□□□□ -2.13
RFC1-217ENST00000639695 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
RFC1-217ENST00000639695 DOPEY2Q9Y3R5 2298 aa1.75□□□□□ -2.13
RFC1-217ENST00000639695 Q6ZRX8 168 aa1.75□□□□□ -2.13
RFC1-217ENST00000639695 DEFB109BQ30KR1 87 aa1.74□□□□□ -2.13
RFC1-217ENST00000639695 DEFB105AQ8NG35 78 aa1.74□□□□□ -2.13
RFC1-217ENST00000639695 H3BUX3 64 aa1.73□□□□□ -2.13
RFC1-217ENST00000639695 PLCE1Q9P212 2302 aa1.72□□□□□ -2.13
RFC1-217ENST00000639695 G3V318 75 aa1.71□□□□□ -2.14
RFC1-217ENST00000639695 HTN1P15515 57 aa1.71□□□□□ -2.14
RFC1-217ENST00000639695 CLPSL2Q6UWE3 100 aa1.71□□□□□ -2.14
RFC1-217ENST00000639695 A0A0C4DFX4 3053 aa1.7□□□□□ -2.14
RFC1-217ENST00000639695 ALMS1Q8TCU4 4167 aa1.7□□□□□ -2.14
RFC1-217ENST00000639695 H0YAA0 97 aa1.7□□□□□ -2.14
RFC1-217ENST00000639695 SPRR1AP35321 89 aa1.7□□□□□ -2.14
RFC1-217ENST00000639695 DEFB1P60022 68 aa1.7□□□□□ -2.14
RFC1-217ENST00000639695 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
RFC1-217ENST00000639695 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
RFC1-217ENST00000639695 DEFB133Q30KQ1 61 aa1.68□□□□□ -2.14
RFC1-217ENST00000639695 SPRR1BP22528 89 aa1.67□□□□□ -2.14
RFC1-217ENST00000639695 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
RFC1-217ENST00000639695 AHCTF1Q8WYP5 2266 aa1.66□□□□□ -2.14
RFC1-217ENST00000639695 A0A0D9SG42 100 aa1.66□□□□□ -2.14
RFC1-217ENST00000639695 CNOT1A5YKK6 2376 aaKnown RBP1.66□□□□□ -2.14
RFC1-217ENST00000639695 WNK2Q9Y3S1 2297 aa1.65□□□□□ -2.14
RFC1-217ENST00000639695 PRO0255Q9UI72 69 aa1.65□□□□□ -2.15
RFC1-217ENST00000639695 SPTBN1Q01082 2364 aaKnown RBP1.64□□□□□ -2.15
RFC1-217ENST00000639695 ZNF462Q96JM2 2506 aa1.64□□□□□ -2.15
RFC1-217ENST00000639695 LELP1Q5T871 98 aa1.64□□□□□ -2.15
RFC1-217ENST00000639695 NOP10Q9NPE3 64 aaKnown RBP1.64□□□□□ -2.15
RFC1-217ENST00000639695 WDR87Q6ZQQ6 2873 aa1.64□□□□□ -2.15
RFC1-217ENST00000639695 DEFB130BP0DP73 79 aa1.63□□□□□ -2.15
RFC1-217ENST00000639695 DEFB130AP0DP74 79 aa1.63□□□□□ -2.15
RFC1-217ENST00000639695 PRLHP81277 87 aa1.63□□□□□ -2.15
RFC1-217ENST00000639695 WNK1Q9H4A3 2382 aa1.62□□□□□ -2.15
RFC1-217ENST00000639695 ASH1LQ9NR48 2969 aaKnown RBP1.62□□□□□ -2.15
RFC1-217ENST00000639695 CACNA1EQ15878 2313 aa1.62□□□□□ -2.15
RFC1-217ENST00000639695 ANKRD17O75179 2603 aaKnown RBP1.61□□□□□ -2.15
RFC1-217ENST00000639695 JMJD1CQ15652 2540 aa1.61□□□□□ -2.15
RFC1-217ENST00000639695 DEFB123Q8N688 67 aa1.61□□□□□ -2.15
RFC1-217ENST00000639695 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
RFC1-217ENST00000639695 TPRP12270 2363 aaKnown RBP1.6□□□□□ -2.15
RFC1-217ENST00000639695 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.154e-9■■■■■ 34.1
RFC1-217ENST00000639695 SPINK1P00995 79 aa1.58□□□□□ -2.16
RFC1-217ENST00000639695 DEFB136Q30KP8 78 aa1.58□□□□□ -2.16
RFC1-217ENST00000639695 AKAP6Q13023 2319 aa1.56□□□□□ -2.16
RFC1-217ENST00000639695 SPTBN2O15020 2390 aa1.55□□□□□ -2.16
RFC1-217ENST00000639695 CEP350Q5VT06 3117 aa1.55□□□□□ -2.16
RFC1-217ENST00000639695 COL6A3P12111 3177 aa1.55□□□□□ -2.16
RFC1-217ENST00000639695 H3BNG1 76 aa1.55□□□□□ -2.16
RFC1-217ENST00000639695 S4R3F8 94 aa1.55□□□□□ -2.16
RFC1-217ENST00000639695 MGAQ8IWI9 3026 aa1.55□□□□□ -2.16
RFC1-217ENST00000639695 A0A096LPF7 62 aa1.54□□□□□ -2.16
RFC1-217ENST00000639695 APLNQ9ULZ1 77 aa1.54□□□□□ -2.16
RFC1-217ENST00000639695 U3KQA8 63 aa1.54□□□□□ -2.16
RFC1-217ENST00000639695 IGF2RP11717 2491 aa1.53□□□□□ -2.16
RFC1-217ENST00000639695 ACACAQ13085 2346 aa1.53□□□□□ -2.16
RFC1-217ENST00000639695 SRCAPQ6ZRS2 3230 aa1.53□□□□□ -2.16
RFC1-217ENST00000639695 MAP1BP46821 2468 aaKnown RBP1.52□□□□□ -2.17
RFC1-217ENST00000639695 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
RFC1-217ENST00000639695 DEFB124Q8NES8 71 aa1.52□□□□□ -2.17
RFC1-217ENST00000639695 SPART-AS1P0CW21 52 aa1.51□□□□□ -2.17
RFC1-217ENST00000639695 PKDREJQ9NTG1 2253 aa1.51□□□□□ -2.17
RFC1-217ENST00000639695 PCNX1Q96RV3 2341 aa1.5□□□□□ -2.17
RFC1-217ENST00000639695 Q5VSD8 79 aa1.5□□□□□ -2.17
RFC1-217ENST00000639695 SPINK6Q6UWN8 80 aa1.5□□□□□ -2.17
RFC1-217ENST00000639695 CEP250Q9BV73 2442 aa1.5□□□□□ -2.17
RFC1-217ENST00000639695 A0A096LNI7 61 aa1.49□□□□□ -2.17
RFC1-217ENST00000639695 SPTA1P02549 2419 aa1.49□□□□□ -2.17
RFC1-217ENST00000639695 CHD7Q9P2D1 2997 aa1.48□□□□□ -2.17
RFC1-217ENST00000639695 PCNTO95613 3336 aa1.48□□□□□ -2.17
RFC1-217ENST00000639695 M0QZ58 72 aa1.47□□□□□ -2.17
RFC1-217ENST00000639695 PTPRZ1P23471 2315 aaPredicted RBP1.46□□□□□ -2.18
RFC1-217ENST00000639695 GOLGB1Q14789 3259 aaKnown RBP1.46□□□□□ -2.18
RFC1-217ENST00000639695 TENM2Q9NT68 2774 aa1.46□□□□□ -2.18
RFC1-217ENST00000639695 SPTBN4Q9H254 2564 aa1.46□□□□□ -2.18
RFC1-217ENST00000639695 APC2O95996 2303 aa1.46□□□□□ -2.18
RFC1-217ENST00000639695 FAM208BQ5VWN6 2430 aa1.46□□□□□ -2.18
RFC1-217ENST00000639695 FAM186AA6NE01 2351 aa1.45□□□□□ -2.18
RFC1-217ENST00000639695 PIEZO2Q9H5I5 2752 aa1.45□□□□□ -2.18
RFC1-217ENST00000639695 HTN3P15516 51 aa1.45□□□□□ -2.18
RFC1-217ENST00000639695 ZZEF1O43149 2961 aa1.45□□□□□ -2.18
RFC1-217ENST00000639695 UTRNP46939 3433 aa1.44□□□□□ -2.18
RFC1-217ENST00000639695 NOTCH1P46531 2555 aa1.44□□□□□ -2.18
RFC1-217ENST00000639695 CACNA1HO95180 2353 aa1.44□□□□□ -2.18
RFC1-217ENST00000639695 VPS13AQ96RL7 3174 aa1.44□□□□□ -2.18
RFC1-217ENST00000639695 CFAP54Q96N23 3096 aa1.43□□□□□ -2.18
RFC1-217ENST00000639695 EP300Q09472 2414 aaPredicted RBP1.43□□□□□ -2.18
RFC1-217ENST00000639695 CENPFP49454 3210 aa1.43□□□□□ -2.18
RFC1-217ENST00000639695 CSPG4Q6UVK1 2322 aa1.43□□□□□ -2.18
RFC1-217ENST00000639695 TNRC18O15417 2968 aaPredicted RBP1.42□□□□□ -2.18
RFC1-217ENST00000639695 CHD6Q8TD26 2715 aa1.41□□□□□ -2.18
RFC1-217ENST00000639695 NBEAQ8NFP9 2946 aa1.4□□□□□ -2.18
RFC1-217ENST00000639695 ZNF469Q96JG9 3925 aaPredicted RBP1.4□□□□□ -2.18
RFC1-217ENST00000639695 DEFB135Q30KP9 77 aa1.4□□□□□ -2.19
RFC1-217ENST00000639695 FBN2P35556 2912 aa1.4□□□□□ -2.19
RFC1-217ENST00000639695 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
RFC1-217ENST00000639695 SZT2Q5T011 3432 aa1.39□□□□□ -2.19
RFC1-217ENST00000639695 SPTBN5Q9NRC6 3674 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms