RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 LINC00575Q6W349 94 aa4.3□□□□□ -1.72
SMG7-216ENST00000638826 USH2AO75445 5202 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 hADV29S1A0JD25 119 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 SCGB1D1O95968 90 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 C3orf79P0CE67 100 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
SMG7-216ENST00000638826 IGFL1Q6UW32 110 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 Q6ZQY7 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 Q96NJ1 140 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
SMG7-216ENST00000638826 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
SMG7-216ENST00000638826 KRTDAPP60985 99 aa4.28□□□□□ -1.72
SMG7-216ENST00000638826 SS18L2Q9UHA2 77 aa4.28□□□□□ -1.72
SMG7-216ENST00000638826 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
SMG7-216ENST00000638826 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
SMG7-216ENST00000638826 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
SMG7-216ENST00000638826 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
SMG7-216ENST00000638826 ANKRD39Q53RE8 183 aa4.26□□□□□ -1.73
SMG7-216ENST00000638826 A8MUU9 505 aa4.25□□□□□ -1.73
SMG7-216ENST00000638826 BVES-AS1Q5T3Y7 98 aa4.24□□□□□ -1.73
SMG7-216ENST00000638826 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
SMG7-216ENST00000638826 FAM236DA0A1B0GTK5 79 aa4.23□□□□□ -1.73
SMG7-216ENST00000638826 SNCGO76070 127 aa4.23□□□□□ -1.73
SMG7-216ENST00000638826 FAM236CP0DP71 79 aa4.23□□□□□ -1.73
SMG7-216ENST00000638826 COA6Q5JTJ3 125 aaKnown RBP4.23□□□□□ -1.73
SMG7-216ENST00000638826 ATOH7Q8N100 152 aa4.23□□□□□ -1.73
SMG7-216ENST00000638826 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
SMG7-216ENST00000638826 C12orf57Q99622 126 aa4.22□□□□□ -1.73
SMG7-216ENST00000638826 H3BUT2 72 aa4.21□□□□□ -1.74
SMG7-216ENST00000638826 LINC00846Q9NV44 126 aa4.21□□□□□ -1.74
SMG7-216ENST00000638826 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
SMG7-216ENST00000638826 HSBP1L1C9JCN9 74 aa4.2□□□□□ -1.74
SMG7-216ENST00000638826 MT2AP02795 61 aa4.2□□□□□ -1.74
SMG7-216ENST00000638826 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
SMG7-216ENST00000638826 GHRHP01286 108 aa4.19□□□□□ -1.74
SMG7-216ENST00000638826 A0A087WSZ3 146 aa4.18□□□□□ -1.74
SMG7-216ENST00000638826 DSCR10P59022 87 aa4.18□□□□□ -1.74
SMG7-216ENST00000638826 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
SMG7-216ENST00000638826 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
SMG7-216ENST00000638826 LINC00313P59037 77 aa4.17□□□□□ -1.74
SMG7-216ENST00000638826 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
SMG7-216ENST00000638826 H0YGX0 51 aa4.16□□□□□ -1.74
SMG7-216ENST00000638826 LCE2BO14633 110 aa4.16□□□□□ -1.74
SMG7-216ENST00000638826 MT1FP04733 61 aa4.16□□□□□ -1.74
SMG7-216ENST00000638826 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
SMG7-216ENST00000638826 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
SMG7-216ENST00000638826 H3BMG7 143 aa4.15□□□□□ -1.75
SMG7-216ENST00000638826 MPLKIPQ8TAP9 179 aa4.15□□□□□ -1.75
SMG7-216ENST00000638826 HIST1H4GQ99525 98 aa4.15□□□□□ -1.75
SMG7-216ENST00000638826 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
SMG7-216ENST00000638826 A0A1B0GX51 115 aa4.13□□□□□ -1.75
SMG7-216ENST00000638826 HRES1P13985 223 aa4.13□□□□□ -1.75
SMG7-216ENST00000638826 RAB37Q96AX2 223 aa4.13□□□□□ -1.75
SMG7-216ENST00000638826 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
SMG7-216ENST00000638826 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
SMG7-216ENST00000638826 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
SMG7-216ENST00000638826 FABP2P12104 132 aa4.12□□□□□ -1.75
SMG7-216ENST00000638826 S100A2P29034 98 aa4.12□□□□□ -1.75
SMG7-216ENST00000638826 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
SMG7-216ENST00000638826 A0A0B4J2C4 111 aa4.1□□□□□ -1.75
SMG7-216ENST00000638826 A0A1W2PNM2 257 aa4.1□□□□□ -1.75
SMG7-216ENST00000638826 H3BQ85 93 aa4.1□□□□□ -1.75
SMG7-216ENST00000638826 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
SMG7-216ENST00000638826 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
SMG7-216ENST00000638826 ANKRD29Q8N6D5 301 aa4.09□□□□□ -1.75
SMG7-216ENST00000638826 FAM218AQ96MZ4 157 aa4.09□□□□□ -1.75
SMG7-216ENST00000638826 HIST1H2BLQ99880 126 aa4.09□□□□□ -1.75
SMG7-216ENST00000638826 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
SMG7-216ENST00000638826 DLEU1O43261 78 aa4.08□□□□□ -1.76
SMG7-216ENST00000638826 COX8AP10176 69 aa4.08□□□□□ -1.76
SMG7-216ENST00000638826 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
SMG7-216ENST00000638826 A8MWP4 228 aa4.07□□□□□ -1.76
SMG7-216ENST00000638826 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
SMG7-216ENST00000638826 DNAL4O96015 105 aa4.06□□□□□ -1.76
SMG7-216ENST00000638826 TRACP01848 142 aa4.06□□□□□ -1.76
SMG7-216ENST00000638826 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
SMG7-216ENST00000638826 TMEM238LA0A1B0GVL6 79 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 A6NJY4 79 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 CCKP06307 115 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 ORMDL1Q9P0S3 153 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
SMG7-216ENST00000638826 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
SMG7-216ENST00000638826 TMEM256-PLSCR3K7ERE1 68 aa4.04□□□□□ -1.76
SMG7-216ENST00000638826 S100A6P06703 90 aa4.04□□□□□ -1.76
SMG7-216ENST00000638826 SPINK7P58062 85 aa4.04□□□□□ -1.76
SMG7-216ENST00000638826 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
SMG7-216ENST00000638826 A0A1B0GV72 72 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms