RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 Q6JHZ5 121 aa10.33□□□□□ -0.76
CLN6-221ENST00000637494 PCOTHQ58A44 107 aa10.32□□□□□ -0.76
CLN6-221ENST00000637494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
CLN6-221ENST00000637494 DLEU1O43261 78 aa10.3□□□□□ -0.76
CLN6-221ENST00000637494 SNCGO76070 127 aa10.3□□□□□ -0.76
CLN6-221ENST00000637494 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
CLN6-221ENST00000637494 IGLV8-61A0A075B6I0 122 aa10.29□□□□□ -0.76
CLN6-221ENST00000637494 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
CLN6-221ENST00000637494 RAB37Q96AX2 223 aa10.28□□□□□ -0.76
CLN6-221ENST00000637494 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
CLN6-221ENST00000637494 OCIAD2Q56VL3 154 aa10.27□□□□□ -0.77
CLN6-221ENST00000637494 C14orf144Q96I85 54 aa10.25□□□□□ -0.77
CLN6-221ENST00000637494 IGFL1Q6UW32 110 aa10.24□□□□□ -0.77
CLN6-221ENST00000637494 PAM16Q9Y3D7 125 aa10.24□□□□□ -0.77
CLN6-221ENST00000637494 TRBV7-7A0A0K0K1E9 115 aa10.23□□□□□ -0.77
CLN6-221ENST00000637494 SPATA45Q537H7 98 aa10.23□□□□□ -0.77
CLN6-221ENST00000637494 VAMP8Q9BV40 100 aa10.23□□□□□ -0.77
CLN6-221ENST00000637494 HIGD1BQ9P298 99 aa10.23□□□□□ -0.77
CLN6-221ENST00000637494 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
CLN6-221ENST00000637494 CFC1P0CG37 223 aa10.22□□□□□ -0.77
CLN6-221ENST00000637494 H0YGX0 51 aa10.21□□□□□ -0.77
CLN6-221ENST00000637494 A0A0B4J2C4 111 aa10.2□□□□□ -0.78
CLN6-221ENST00000637494 RPL37P61927 97 aaKnown RBP10.2□□□□□ -0.78
CLN6-221ENST00000637494 GHRHP01286 108 aa10.18□□□□□ -0.78
CLN6-221ENST00000637494 TMEM238LA0A1B0GVL6 79 aa10.17□□□□□ -0.78
CLN6-221ENST00000637494 A6NJY4 79 aa10.17□□□□□ -0.78
CLN6-221ENST00000637494 H3BUT2 72 aa10.16□□□□□ -0.78
CLN6-221ENST00000637494 LST1O00453 97 aa10.15□□□□□ -0.78
CLN6-221ENST00000637494 CEND1Q8N111 149 aa10.14□□□□□ -0.79
CLN6-221ENST00000637494 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
CLN6-221ENST00000637494 C2orf91Q6ZV80 131 aa10.13□□□□□ -0.79
CLN6-221ENST00000637494 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
CLN6-221ENST00000637494 A0A1B0GX51 115 aa10.11□□□□□ -0.79
CLN6-221ENST00000637494 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
CLN6-221ENST00000637494 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
CLN6-221ENST00000637494 Q6Q795 121 aa10.09□□□□□ -0.79
CLN6-221ENST00000637494 TEN1Q86WV5 123 aa10.09□□□□□ -0.79
CLN6-221ENST00000637494 FAM218AQ96MZ4 157 aa10.09□□□□□ -0.79
CLN6-221ENST00000637494 OBSCN-AS1Q96MR7 158 aa10.08□□□□□ -0.8
CLN6-221ENST00000637494 FABP2P12104 132 aa10.07□□□□□ -0.8
CLN6-221ENST00000637494 KRTAP19-2Q3LHN2 52 aa10.07□□□□□ -0.8
CLN6-221ENST00000637494 COX6B2Q6YFQ2 88 aa10.07□□□□□ -0.8
CLN6-221ENST00000637494 ATP11AUNQ6ZP68 121 aa10.07□□□□□ -0.8
CLN6-221ENST00000637494 H3BMG7 143 aa10.06□□□□□ -0.8
CLN6-221ENST00000637494 MT1HP80294 61 aa10.04□□□□□ -0.8
CLN6-221ENST00000637494 DNAL4O96015 105 aa10.03□□□□□ -0.8
CLN6-221ENST00000637494 FXYD2P54710 66 aa10.03□□□□□ -0.8
CLN6-221ENST00000637494 KRTAP9-6A0A140TA67 174 aa10.02□□□□□ -0.81
CLN6-221ENST00000637494 TRIAP1O43715 76 aa10.02□□□□□ -0.81
CLN6-221ENST00000637494 Q75L30 129 aa10.02□□□□□ -0.81
CLN6-221ENST00000637494 Q96NJ1 140 aa10.02□□□□□ -0.81
CLN6-221ENST00000637494 A0A087WSZ3 146 aa10.01□□□□□ -0.81
CLN6-221ENST00000637494 H3BQ85 93 aa10.01□□□□□ -0.81
CLN6-221ENST00000637494 PSMB2P49721 201 aa10.01□□□□□ -0.81
CLN6-221ENST00000637494 HSD52Q0P140 79 aa10.01□□□□□ -0.81
CLN6-221ENST00000637494 LCE2DQ5TA82 110 aaPredicted RBP10.01□□□□□ -0.81
CLN6-221ENST00000637494 M0R2T5 61 aa9.99□□□□□ -0.81
CLN6-221ENST00000637494 COX6CP09669 75 aa9.99□□□□□ -0.81
CLN6-221ENST00000637494 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
CLN6-221ENST00000637494 PYY3Q5JQD4 70 aa9.96□□□□□ -0.82
CLN6-221ENST00000637494 ANKRD29Q8N6D5 301 aa9.95□□□□□ -0.82
CLN6-221ENST00000637494 TMEM256-PLSCR3K7ERE1 68 aa9.93□□□□□ -0.82
CLN6-221ENST00000637494 SIGMAR1Q99720 223 aa9.92□□□□□ -0.82
CLN6-221ENST00000637494 A0A1W2PNM2 257 aa9.91□□□□□ -0.82
CLN6-221ENST00000637494 K7ERJ3 54 aa9.91□□□□□ -0.82
CLN6-221ENST00000637494 UQCR10Q9UDW1 63 aa9.91□□□□□ -0.82
CLN6-221ENST00000637494 C20orf166-AS1Q96NR2 134 aa9.9□□□□□ -0.82
CLN6-221ENST00000637494 TRBV7-4A0A0J9YYF1 115 aa9.89□□□□□ -0.83
CLN6-221ENST00000637494 A0A1B0GV72 72 aa9.89□□□□□ -0.83
CLN6-221ENST00000637494 A8MUU9 505 aa9.87□□□□□ -0.83
CLN6-221ENST00000637494 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
CLN6-221ENST00000637494 DSCR10P59022 87 aa9.86□□□□□ -0.83
CLN6-221ENST00000637494 TMA7Q9Y2S6 64 aaKnown RBP9.86□□□□□ -0.83
CLN6-221ENST00000637494 TRACP01848 142 aa9.85□□□□□ -0.83
CLN6-221ENST00000637494 IGKV4-1P06312 121 aa9.85□□□□□ -0.83
CLN6-221ENST00000637494 SCGB1C2P0DMR2 95 aa9.85□□□□□ -0.83
CLN6-221ENST00000637494 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
CLN6-221ENST00000637494 TRBV20-1A0A075B6N2 111 aa9.84□□□□□ -0.83
CLN6-221ENST00000637494 CCKP06307 115 aa9.84□□□□□ -0.83
CLN6-221ENST00000637494 LINC00313P59037 77 aa9.84□□□□□ -0.83
CLN6-221ENST00000637494 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
CLN6-221ENST00000637494 VPS25Q9BRG1 176 aa9.78□□□□□ -0.84
CLN6-221ENST00000637494 CRCT1Q9UGL9 99 aa9.78□□□□□ -0.84
CLN6-221ENST00000637494 RBM3P98179 157 aaKnown RBP9.77□□□□□ -0.85
CLN6-221ENST00000637494 DSCR8Q96T75 97 aa9.77□□□□□ -0.85
CLN6-221ENST00000637494 DEFB116Q30KQ4 102 aa9.75□□□□□ -0.85
CLN6-221ENST00000637494 LINC00472Q9H8W2 130 aa9.75□□□□□ -0.85
CLN6-221ENST00000637494 C21orf62-AS1Q17RA5 79 aa9.74□□□□□ -0.85
CLN6-221ENST00000637494 IGHV6-1A0A0B4J1U7 121 aa9.73□□□□□ -0.85
CLN6-221ENST00000637494 KRTAP16-1A8MUX0 517 aa9.7□□□□□ -0.86
CLN6-221ENST00000637494 BAALC-AS2P0C853 105 aa9.7□□□□□ -0.86
CLN6-221ENST00000637494 C9JAW5 83 aa9.69□□□□□ -0.86
CLN6-221ENST00000637494 M0R143 59 aa9.69□□□□□ -0.86
CLN6-221ENST00000637494 C8orf87E5RJ46 101 aa9.68□□□□□ -0.86
CLN6-221ENST00000637494 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
CLN6-221ENST00000637494 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
CLN6-221ENST00000637494 NOTCH2NLQ7Z3S9 236 aa9.67□□□□□ -0.86
CLN6-221ENST00000637494 J3KT08 172 aa9.66□□□□□ -0.86
CLN6-221ENST00000637494 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
CLN6-221ENST00000637494 ATXN8Q156A1 80 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms