RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 MGAM2Q2M2H8 2515 aa5.42□□□□□ -1.54
SMARCA2-246ENST00000635739 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
SMARCA2-246ENST00000635739 KRTAP1-1Q07627 177 aa5.42□□□□□ -1.54
SMARCA2-246ENST00000635739 WWC2-AS2Q96NR7 200 aa5.41□□□□□ -1.54
SMARCA2-246ENST00000635739 UNC79Q9P2D8 2635 aa5.41□□□□□ -1.54
SMARCA2-246ENST00000635739 A0A0G2JQZ4 141 aa5.4□□□□□ -1.54
SMARCA2-246ENST00000635739 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
SMARCA2-246ENST00000635739 SPANXA2-OT1Q8N9U9 137 aa5.4□□□□□ -1.55
SMARCA2-246ENST00000635739 IGLV5-37A0A075B6J1 123 aa5.39□□□□□ -1.55
SMARCA2-246ENST00000635739 A8MWP4 228 aa5.39□□□□□ -1.55
SMARCA2-246ENST00000635739 KRTAP26-1Q6PEX3 210 aa5.39□□□□□ -1.55
SMARCA2-246ENST00000635739 ATRQ13535 2644 aa5.38□□□□□ -1.55
SMARCA2-246ENST00000635739 SPRR1AP35321 89 aa5.38□□□□□ -1.55
SMARCA2-246ENST00000635739 PDZD2O15018 2839 aa5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 CD164Q04900 197 aa5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 TNP2Q05952 138 aa5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 COA5Q86WW8 74 aa5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 ZCCHC13Q8WW36 166 aaKnown RBP5.37□□□□□ -1.55
SMARCA2-246ENST00000635739 LINC00588Q9Y4M8 146 aa5.36□□□□□ -1.55
SMARCA2-246ENST00000635739 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
SMARCA2-246ENST00000635739 LCE6AA0A183 80 aa5.35□□□□□ -1.55
SMARCA2-246ENST00000635739 C16orf90A8MZG2 172 aa5.35□□□□□ -1.55
SMARCA2-246ENST00000635739 ANK3Q12955 4377 aaKnown RBP5.35□□□□□ -1.55
SMARCA2-246ENST00000635739 ATP11AUNQ6ZP68 121 aa5.35□□□□□ -1.55
SMARCA2-246ENST00000635739 IGHV6-1A0A0B4J1U7 121 aa5.34□□□□□ -1.55
SMARCA2-246ENST00000635739 KMT2BQ9UMN6 2715 aaPredicted RBP5.34□□□□□ -1.55
SMARCA2-246ENST00000635739 CASC10Q5T4H9 136 aa5.34□□□□□ -1.56
SMARCA2-246ENST00000635739 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
SMARCA2-246ENST00000635739 Q8N9P0 234 aaPredicted RBP5.33□□□□□ -1.56
SMARCA2-246ENST00000635739 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
SMARCA2-246ENST00000635739 KRTAP4-16G5E9R7 235 aaPredicted RBP5.32□□□□□ -1.56
SMARCA2-246ENST00000635739 TEP1Q99973 2627 aaKnown RBP5.32□□□□□ -1.56
SMARCA2-246ENST00000635739 PHF5AQ7RTV0 110 aaKnown RBP5.32□□□□□ -1.56
SMARCA2-246ENST00000635739 Q5VV11 94 aa5.31□□□□□ -1.56
SMARCA2-246ENST00000635739 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
SMARCA2-246ENST00000635739 OTOGQ6ZRI0 2925 aa5.31□□□□□ -1.56
SMARCA2-246ENST00000635739 MOBPQ13875 183 aa5.31□□□□□ -1.56
SMARCA2-246ENST00000635739 SPINK6Q6UWN8 80 aa5.31□□□□□ -1.56
SMARCA2-246ENST00000635739 CHTF8P0CG12 524 aa5.28□□□□□ -1.56
SMARCA2-246ENST00000635739 CNBPP62633 177 aaKnown RBP5.28□□□□□ -1.56
SMARCA2-246ENST00000635739 MDFIQ99750 246 aa5.28□□□□□ -1.56
SMARCA2-246ENST00000635739 IGLV8-61A0A075B6I0 122 aa5.28□□□□□ -1.56
SMARCA2-246ENST00000635739 KRTAP10-11P60412 298 aa5.28□□□□□ -1.56
SMARCA2-246ENST00000635739 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
SMARCA2-246ENST00000635739 Q75L30 129 aa5.27□□□□□ -1.57
SMARCA2-246ENST00000635739 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
SMARCA2-246ENST00000635739 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
SMARCA2-246ENST00000635739 VWFP04275 2813 aa5.26□□□□□ -1.57
SMARCA2-246ENST00000635739 KRTAP29-1A8MX34 341 aaPredicted RBP5.26□□□□□ -1.57
SMARCA2-246ENST00000635739 C1orf134Q5TEV5 83 aa5.25□□□□□ -1.57
SMARCA2-246ENST00000635739 MRPL34Q9BQ48 92 aaKnown RBP5.25□□□□□ -1.57
SMARCA2-246ENST00000635739 STAB1Q9NY15 2570 aa5.25□□□□□ -1.57
SMARCA2-246ENST00000635739 C4orf48Q5BLP8 95 aa5.24□□□□□ -1.57
SMARCA2-246ENST00000635739 C7orf65Q6ZTY9 151 aa5.24□□□□□ -1.57
SMARCA2-246ENST00000635739 LINC00472Q9H8W2 130 aa5.24□□□□□ -1.57
SMARCA2-246ENST00000635739 TRRAPQ9Y4A5 3859 aa5.24□□□□□ -1.57
SMARCA2-246ENST00000635739 ACYP2P14621 99 aa5.24□□□□□ -1.57
SMARCA2-246ENST00000635739 KRTAP21-3Q3LHN1 58 aa5.23□□□□□ -1.57
SMARCA2-246ENST00000635739 MMP24-AS1A0A0U1RRL7 71 aa5.23□□□□□ -1.57
SMARCA2-246ENST00000635739 A0A1B0GVX0 72 aa5.22□□□□□ -1.57
SMARCA2-246ENST00000635739 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
SMARCA2-246ENST00000635739 SPRR1BP22528 89 aa5.22□□□□□ -1.57
SMARCA2-246ENST00000635739 LINC01558Q9Y6Z2 57 aa5.22□□□□□ -1.57
SMARCA2-246ENST00000635739 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
SMARCA2-246ENST00000635739 C9orf163Q8N9P6 203 aa5.21□□□□□ -1.58
SMARCA2-246ENST00000635739 KRTAP7-1Q8IUC3 87 aa5.2□□□□□ -1.58
SMARCA2-246ENST00000635739 A0A1B0GU69 56 aa5.2□□□□□ -1.58
SMARCA2-246ENST00000635739 CIRBP-AS1Q8TBR5 109 aa5.2□□□□□ -1.58
SMARCA2-246ENST00000635739 NOTCH1P46531 2555 aa5.19□□□□□ -1.58
SMARCA2-246ENST00000635739 LCA10Q71F78 164 aa5.19□□□□□ -1.58
SMARCA2-246ENST00000635739 FAM229AH3BQW9 127 aa5.18□□□□□ -1.58
SMARCA2-246ENST00000635739 A8MU10 97 aa5.18□□□□□ -1.58
SMARCA2-246ENST00000635739 J3QL48 77 aa5.17□□□□□ -1.58
SMARCA2-246ENST00000635739 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
SMARCA2-246ENST00000635739 HIVEP1P15822 2718 aa5.17□□□□□ -1.58
SMARCA2-246ENST00000635739 COL6A5A8TX70 2615 aa5.16□□□□□ -1.58
SMARCA2-246ENST00000635739 HRES1P13985 223 aa5.15□□□□□ -1.58
SMARCA2-246ENST00000635739 RETNLBQ9BQ08 111 aa5.15□□□□□ -1.58
SMARCA2-246ENST00000635739 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
SMARCA2-246ENST00000635739 NSD1Q96L73 2696 aaPredicted RBP5.14□□□□□ -1.59
SMARCA2-246ENST00000635739 SPINK7P58062 85 aa5.14□□□□□ -1.59
SMARCA2-246ENST00000635739 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
SMARCA2-246ENST00000635739 NBDYA0A0U1RRE5 68 aa5.13□□□□□ -1.59
SMARCA2-246ENST00000635739 ANK2Q01484 3957 aa5.13□□□□□ -1.59
SMARCA2-246ENST00000635739 Q6ZR54 194 aa5.12□□□□□ -1.59
SMARCA2-246ENST00000635739 K7EIL1 84 aa5.11□□□□□ -1.59
SMARCA2-246ENST00000635739 UQCR11O14957 56 aa5.11□□□□□ -1.59
SMARCA2-246ENST00000635739 A6NN06 94 aa5.11□□□□□ -1.59
SMARCA2-246ENST00000635739 LINC00313P59037 77 aa5.11□□□□□ -1.59
SMARCA2-246ENST00000635739 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
SMARCA2-246ENST00000635739 ZNF861PO60384 105 aa5.1□□□□□ -1.59
SMARCA2-246ENST00000635739 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
SMARCA2-246ENST00000635739 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
SMARCA2-246ENST00000635739 IGKV2-30P06310 120 aa5.09□□□□□ -1.59
SMARCA2-246ENST00000635739 PKD1L1Q8TDX9 2849 aa5.09□□□□□ -1.59
SMARCA2-246ENST00000635739 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.6
SMARCA2-246ENST00000635739 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
SMARCA2-246ENST00000635739 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms