RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
LINC00550-201ENST00000629293 OXTP01178 125 aa3.07□□□□□ -1.92
LINC00550-201ENST00000629293 PRR3P79522 188 aaKnown RBP3.07□□□□□ -1.92
LINC00550-201ENST00000629293 KRTAP26-1Q6PEX3 210 aa3.07□□□□□ -1.92
LINC00550-201ENST00000629293 TMEM126AQ9H061 195 aa3.07□□□□□ -1.92
LINC00550-201ENST00000629293 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
LINC00550-201ENST00000629293 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
LINC00550-201ENST00000629293 ORMDL1Q9P0S3 153 aa3.07□□□□□ -1.92
LINC00550-201ENST00000629293 IGLV6-57P01721 117 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 C14orf132Q9NPU4 83 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 PANO1I0J062 215 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 NCR3O14931 201 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 CHTF8P0CG12 524 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 C14orf177Q52M58 125 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 C6orf48Q9UBA6 75 aa3.06□□□□□ -1.92
LINC00550-201ENST00000629293 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
LINC00550-201ENST00000629293 HIST1H4AP62805 103 aaKnown RBP3.05□□□□□ -1.92
LINC00550-201ENST00000629293 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
LINC00550-201ENST00000629293 LINC00575Q6W349 94 aa3.05□□□□□ -1.92
LINC00550-201ENST00000629293 LINC00526Q96FQ7 95 aa3.05□□□□□ -1.92
LINC00550-201ENST00000629293 IGKV2-24A0A0C4DH68 120 aa3.05□□□□□ -1.92
LINC00550-201ENST00000629293 CCDC179H3BU77 68 aa3.05□□□□□ -1.92
LINC00550-201ENST00000629293 Q6JHZ5 121 aa3.05□□□□□ -1.92
LINC00550-201ENST00000629293 CCKP06307 115 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 LINC00846Q9NV44 126 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 FAM236AA0A1B0GUQ0 79 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 FAM236BA0A1B0GV22 79 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 JMJD7-PLA2G4BH0Y9G9 81 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 TMEM256-PLSCR3K7ERE1 68 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 C15orf56Q8N910 161 aa3.04□□□□□ -1.92
LINC00550-201ENST00000629293 S100A7L2Q5SY68 101 aa3.03□□□□□ -1.92
LINC00550-201ENST00000629293 RPL18AQ02543 176 aaKnown RBP3.03□□□□□ -1.92
LINC00550-201ENST00000629293 C9orf163Q8N9P6 203 aa3.03□□□□□ -1.92
LINC00550-201ENST00000629293 TRBV10-3A0A0K0K1G6 114 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 hADV29S1A0JD25 119 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 LOC110117498A0A087WWA1 95 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 TRBV7-6A0A0J9YX20 115 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 HIGD2BQ4VC39 106 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 Q6ZRU5 148 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 C7orf33Q8WU49 177 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 XAGE1AQ9HD64 81 aa3.02□□□□□ -1.93
LINC00550-201ENST00000629293 H3BQ85 93 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 ELOF1P60002 83 aaKnown RBP3.01□□□□□ -1.93
LINC00550-201ENST00000629293 Q6ZQT0 140 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 DIRC1Q969H9 104 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 NDUFC2-KCTD14E9PQ53 114 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 ATP5EP2Q5VTU8 51 aa3.01□□□□□ -1.93
LINC00550-201ENST00000629293 ZNF73O43830 326 aaPredicted RBP3□□□□□ -1.93
LINC00550-201ENST00000629293 SS18L2Q9UHA2 77 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 IGKV3D-7A0A0C4DH55 119 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 M0R378 163 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3□□□□□ -1.93
LINC00550-201ENST00000629293 ATOX1O00244 68 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 COX7BP24311 80 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 Q6ZQY7 126 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 C3orf22Q8N5N4 141 aa3□□□□□ -1.93
LINC00550-201ENST00000629293 UQCRQO14949 82 aa2.99□□□□□ -1.93
LINC00550-201ENST00000629293 RBM3P98179 157 aaKnown RBP2.99□□□□□ -1.93
LINC00550-201ENST00000629293 TRBV7-4A0A0J9YYF1 115 aa2.99□□□□□ -1.93
LINC00550-201ENST00000629293 TLX1NBP0CAT3 122 aa2.99□□□□□ -1.93
LINC00550-201ENST00000629293 COX7CP15954 63 aa2.99□□□□□ -1.93
LINC00550-201ENST00000629293 A0A087WVE0 104 aa2.98□□□□□ -1.93
LINC00550-201ENST00000629293 SYCNQ0VAF6 134 aa2.98□□□□□ -1.93
LINC00550-201ENST00000629293 MUC2Q02817 5179 aa2.98□□□□□ -1.93
LINC00550-201ENST00000629293 PDE6GP18545 87 aa2.98□□□□□ -1.93
LINC00550-201ENST00000629293 CRYGAP11844 174 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 SPACA4Q8TDM5 124 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 UBL5Q9BZL1 73 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 KCNQ1DNQ9H478 68 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 LAMTOR3Q9UHA4 124 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 TNXBP22105 4242 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 CNBPP62633 177 aaKnown RBP2.97□□□□□ -1.93
LINC00550-201ENST00000629293 C9orf153Q5TBE3 101 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 A0A096LNI7 61 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 REG3GQ6UW15 175 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 DSCR8Q96T75 97 aa2.97□□□□□ -1.93
LINC00550-201ENST00000629293 SERP2Q8N6R1 65 aa2.96□□□□□ -1.94
LINC00550-201ENST00000629293 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.94
LINC00550-201ENST00000629293 IGKV2-30P06310 120 aa2.96□□□□□ -1.94
LINC00550-201ENST00000629293 FAM19A1Q7Z5A9 133 aa2.96□□□□□ -1.94
LINC00550-201ENST00000629293 Q8N9P0 234 aaPredicted RBP2.96□□□□□ -1.94
LINC00550-201ENST00000629293 PLAC8Q9NZF1 115 aa2.96□□□□□ -1.94
LINC00550-201ENST00000629293 LPAP08519 4548 aa2.96□□□□□ -1.94
LINC00550-201ENST00000629293 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
LINC00550-201ENST00000629293 SPRR1AP35321 89 aa2.95□□□□□ -1.94
LINC00550-201ENST00000629293 CXCL6P80162 114 aa2.95□□□□□ -1.94
LINC00550-201ENST00000629293 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
LINC00550-201ENST00000629293 BCE1O60756 84 aa2.94□□□□□ -1.94
LINC00550-201ENST00000629293 NKAPP1Q8N9T2 125 aa2.94□□□□□ -1.94
LINC00550-201ENST00000629293 IGLV1-50A0A075B6I6 118 aa2.94□□□□□ -1.94
LINC00550-201ENST00000629293 Q6ZRX8 168 aa2.94□□□□□ -1.94
LINC00550-201ENST00000629293 OCR1Q9BZK8 76 aa2.94□□□□□ -1.94
LINC00550-201ENST00000629293 IGLV5-48A0A075B6I7 105 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 FAM168BA1KXE4 195 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 RPL37AP8A6NKH3 93 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 Q8N377 158 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms