RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 MIR22HGQ0VDD5 57 aa11.18□□□□□ -0.62
FARP1-242ENST00000627049 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
FARP1-242ENST00000627049 SPTBN5Q9NRC6 3674 aaKnown RBP11.16□□□□□ -0.62
FARP1-242ENST00000627049 Q5VV11 94 aa11.16□□□□□ -0.62
FARP1-242ENST00000627049 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
FARP1-242ENST00000627049 CFAP46Q8IYW2 2715 aa11.15□□□□□ -0.62
FARP1-242ENST00000627049 EYSQ5T1H1 3165 aa11.14□□□□□ -0.63
FARP1-242ENST00000627049 LRBAP50851 2863 aa11.14□□□□□ -0.63
FARP1-242ENST00000627049 PRR26Q8N8Z3 221 aa11.13□□□□□ -0.63
FARP1-242ENST00000627049 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
FARP1-242ENST00000627049 ZNF861PO60384 105 aa11.12□□□□□ -0.63
FARP1-242ENST00000627049 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
FARP1-242ENST00000627049 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
FARP1-242ENST00000627049 LINC01558Q9Y6Z2 57 aa11.08□□□□□ -0.64
FARP1-242ENST00000627049 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
FARP1-242ENST00000627049 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
FARP1-242ENST00000627049 TNP2Q05952 138 aa11.07□□□□□ -0.64
FARP1-242ENST00000627049 MYO15AQ9UKN7 3530 aa11.07□□□□□ -0.64
FARP1-242ENST00000627049 ATMQ13315 3056 aa11.06□□□□□ -0.64
FARP1-242ENST00000627049 K7EIL1 84 aa11.05□□□□□ -0.64
FARP1-242ENST00000627049 TEX15Q9BXT5 2789 aa11.05□□□□□ -0.64
FARP1-242ENST00000627049 ZZEF1O43149 2961 aa11.04□□□□□ -0.64
FARP1-242ENST00000627049 Q96NJ1 140 aa11.04□□□□□ -0.64
FARP1-242ENST00000627049 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
FARP1-242ENST00000627049 LINC00472Q9H8W2 130 aa11.02□□□□□ -0.65
FARP1-242ENST00000627049 PSORS1C2Q9UIG4 136 aa11.01□□□□□ -0.65
FARP1-242ENST00000627049 ZCCHC13Q8WW36 166 aaKnown RBP11.01□□□□□ -0.65
FARP1-242ENST00000627049 CFAP47Q6ZTR5 3102 aa11□□□□□ -0.65
FARP1-242ENST00000627049 TYMSOSQ8TAI1 123 aa10.99□□□□□ -0.65
FARP1-242ENST00000627049 MAST4O15021 2626 aa10.98□□□□□ -0.65
FARP1-242ENST00000627049 USP34Q70CQ2 3546 aa10.98□□□□□ -0.65
FARP1-242ENST00000627049 A0A087WTM6 91 aa10.96□□□□□ -0.66
FARP1-242ENST00000627049 SPRR1BP22528 89 aa10.96□□□□□ -0.66
FARP1-242ENST00000627049 DMXL2Q8TDJ6 3036 aa10.95□□□□□ -0.66
FARP1-242ENST00000627049 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
FARP1-242ENST00000627049 J3QL48 77 aa10.95□□□□□ -0.66
FARP1-242ENST00000627049 HRES1P13985 223 aa10.95□□□□□ -0.66
FARP1-242ENST00000627049 ITPR1Q14643 2758 aa10.95□□□□□ -0.66
FARP1-242ENST00000627049 HELZ2Q9BYK8 2649 aaKnown RBP10.92□□□□□ -0.66
FARP1-242ENST00000627049 APLNQ9ULZ1 77 aa10.92□□□□□ -0.66
FARP1-242ENST00000627049 SETXQ7Z333 2677 aaKnown RBP10.91□□□□□ -0.66
FARP1-242ENST00000627049 IGLV7-43P04211 117 aa10.91□□□□□ -0.66
FARP1-242ENST00000627049 LOC400499M0QZD8 3231 aa10.91□□□□□ -0.66
FARP1-242ENST00000627049 SPINK7P58062 85 aa10.9□□□□□ -0.66
FARP1-242ENST00000627049 KRTAP29-1A8MX34 341 aaPredicted RBP10.88□□□□□ -0.67
FARP1-242ENST00000627049 LCE6AA0A183 80 aa10.87□□□□□ -0.67
FARP1-242ENST00000627049 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
FARP1-242ENST00000627049 COL12A1Q99715 3063 aa10.86□□□□□ -0.67
FARP1-242ENST00000627049 FLNCQ14315 2725 aa10.85□□□□□ -0.67
FARP1-242ENST00000627049 ASH1LQ9NR48 2969 aaKnown RBP10.85□□□□□ -0.67
FARP1-242ENST00000627049 IGSF10Q6WRI0 2623 aa10.84□□□□□ -0.67
FARP1-242ENST00000627049 PRAC1Q96KF2 57 aa10.84□□□□□ -0.67
FARP1-242ENST00000627049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
FARP1-242ENST00000627049 LINC01554Q52M75 96 aa10.82□□□□□ -0.68
FARP1-242ENST00000627049 SPINT4Q6UDR6 99 aa10.81□□□□□ -0.68
FARP1-242ENST00000627049 NOTCH1P46531 2555 aa10.81□□□□□ -0.68
FARP1-242ENST00000627049 UBR5O95071 2799 aaPredicted RBP10.8□□□□□ -0.68
FARP1-242ENST00000627049 Q8N1X5 172 aa10.78□□□□□ -0.68
FARP1-242ENST00000627049 NBEAL1Q6ZS30 2694 aa10.75□□□□□ -0.69
FARP1-242ENST00000627049 Q6ZR54 194 aa10.73□□□□□ -0.69
FARP1-242ENST00000627049 KRTAP1-5Q9BYS1 174 aa10.71□□□□□ -0.69
FARP1-242ENST00000627049 DMXL1Q9Y485 3027 aa10.7□□□□□ -0.7
FARP1-242ENST00000627049 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
FARP1-242ENST00000627049 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
FARP1-242ENST00000627049 HRNRQ86YZ3 2850 aaPredicted RBP10.7□□□□□ -0.7
FARP1-242ENST00000627049 Q5W150 140 aa10.7□□□□□ -0.7
FARP1-242ENST00000627049 TEP1Q99973 2627 aaKnown RBP10.69□□□□□ -0.7
FARP1-242ENST00000627049 BAHCC1Q9P281 2608 aa10.67□□□□□ -0.7
FARP1-242ENST00000627049 WDFY3Q8IZQ1 3526 aa10.67□□□□□ -0.7
FARP1-242ENST00000627049 ZANQ9Y493 2812 aa10.66□□□□□ -0.7
FARP1-242ENST00000627049 COX6B2Q6YFQ2 88 aa10.66□□□□□ -0.7
FARP1-242ENST00000627049 C9orf92A6NGG3 77 aa10.65□□□□□ -0.7
FARP1-242ENST00000627049 KRTAP7-1Q8IUC3 87 aa10.63□□□□□ -0.71
FARP1-242ENST00000627049 A8MU10 97 aa10.62□□□□□ -0.71
FARP1-242ENST00000627049 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
FARP1-242ENST00000627049 UTP20O75691 2785 aaKnown RBP10.62□□□□□ -0.71
FARP1-242ENST00000627049 A6NN06 94 aa10.61□□□□□ -0.71
FARP1-242ENST00000627049 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
FARP1-242ENST00000627049 CSAG1Q6PB30 78 aa10.61□□□□□ -0.71
FARP1-242ENST00000627049 A0A1B0GU33 70 aa10.6□□□□□ -0.71
FARP1-242ENST00000627049 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
FARP1-242ENST00000627049 SMR3BP02814 79 aaPredicted RBP10.58□□□□□ -0.72
FARP1-242ENST00000627049 LINC00483Q53H64 154 aa10.57□□□□□ -0.72
FARP1-242ENST00000627049 H3BS24 57 aa10.56□□□□□ -0.72
FARP1-242ENST00000627049 APCP25054 2843 aa10.56□□□□□ -0.72
FARP1-242ENST00000627049 STAB1Q9NY15 2570 aa10.55□□□□□ -0.72
FARP1-242ENST00000627049 ASB16-AS1Q495Z4 193 aa10.51□□□□□ -0.73
FARP1-242ENST00000627049 PANO1I0J062 215 aa10.5□□□□□ -0.73
FARP1-242ENST00000627049 DCHS1Q96JQ0 3298 aa10.5□□□□□ -0.73
FARP1-242ENST00000627049 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
FARP1-242ENST00000627049 A0A087X002 238 aa10.49□□□□□ -0.73
FARP1-242ENST00000627049 NOTCH2NLQ7Z3S9 236 aa10.49□□□□□ -0.73
FARP1-242ENST00000627049 A0A0D9SG42 100 aa10.49□□□□□ -0.73
FARP1-242ENST00000627049 CELSR2Q9HCU4 2923 aa10.48□□□□□ -0.73
FARP1-242ENST00000627049 FBN2P35556 2912 aa10.46□□□□□ -0.74
FARP1-242ENST00000627049 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
FARP1-242ENST00000627049 NSD1Q96L73 2696 aaPredicted RBP10.44□□□□□ -0.74
FARP1-242ENST00000627049 HIVEP1P15822 2718 aa10.41□□□□□ -0.74
FARP1-242ENST00000627049 NF1P21359 2839 aa10.41□□□□□ -0.74
FARP1-242ENST00000627049 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms