RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TENM2Q9NT68 2774 aa7.52□□□□□ -1.21
LINC00538-201ENST00000626109 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
LINC00538-201ENST00000626109 NBDYA0A0U1RRE5 68 aa7.5□□□□□ -1.21
LINC00538-201ENST00000626109 IGLV6-57P01721 117 aa7.5□□□□□ -1.21
LINC00538-201ENST00000626109 ENHOQ6UWT2 76 aa7.5□□□□□ -1.21
LINC00538-201ENST00000626109 UBL5Q9BZL1 73 aa7.5□□□□□ -1.21
LINC00538-201ENST00000626109 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
LINC00538-201ENST00000626109 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
LINC00538-201ENST00000626109 PDE6GP18545 87 aa7.49□□□□□ -1.21
LINC00538-201ENST00000626109 M0R2N4 97 aa7.48□□□□□ -1.21
LINC00538-201ENST00000626109 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
LINC00538-201ENST00000626109 TRBV10-3A0A0K0K1G6 114 aa7.48□□□□□ -1.21
LINC00538-201ENST00000626109 H7BZZ5 65 aa7.48□□□□□ -1.21
LINC00538-201ENST00000626109 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
LINC00538-201ENST00000626109 LOC110117498A0A087WWA1 95 aa7.47□□□□□ -1.21
LINC00538-201ENST00000626109 A8MWP4 228 aa7.47□□□□□ -1.21
LINC00538-201ENST00000626109 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
LINC00538-201ENST00000626109 Q8NDZ9 215 aa7.47□□□□□ -1.21
LINC00538-201ENST00000626109 TRAV23DV6A0A075B6W5 121 aa7.46□□□□□ -1.21
LINC00538-201ENST00000626109 C6orf48Q9UBA6 75 aa7.46□□□□□ -1.21
LINC00538-201ENST00000626109 K7ERS5 55 aa7.46□□□□□ -1.22
LINC00538-201ENST00000626109 Q6ZR54 194 aa7.46□□□□□ -1.22
LINC00538-201ENST00000626109 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
LINC00538-201ENST00000626109 LINC01547P58512 204 aaPredicted RBP7.45□□□□□ -1.22
LINC00538-201ENST00000626109 NDUFC1O43677 76 aa7.44□□□□□ -1.22
LINC00538-201ENST00000626109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.44□□□□□ -1.22
LINC00538-201ENST00000626109 Q6ZQT0 140 aa7.44□□□□□ -1.22
LINC00538-201ENST00000626109 COX7BP24311 80 aa7.44□□□□□ -1.22
LINC00538-201ENST00000626109 Q8NBF4 154 aa7.44□□□□□ -1.22
LINC00538-201ENST00000626109 IGKV2D-24A0A075B6R9 120 aa7.43□□□□□ -1.22
LINC00538-201ENST00000626109 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
LINC00538-201ENST00000626109 C1orf134Q5TEV5 83 aa7.42□□□□□ -1.22
LINC00538-201ENST00000626109 Q6ZQY7 126 aa7.42□□□□□ -1.22
LINC00538-201ENST00000626109 VPS13DQ5THJ4 4388 aa7.42□□□□□ -1.22
LINC00538-201ENST00000626109 A0A087WVE0 104 aa7.41□□□□□ -1.22
LINC00538-201ENST00000626109 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
LINC00538-201ENST00000626109 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
LINC00538-201ENST00000626109 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.22
LINC00538-201ENST00000626109 PSCAO43653 123 aa7.4□□□□□ -1.23
LINC00538-201ENST00000626109 BCE1O60756 84 aa7.4□□□□□ -1.23
LINC00538-201ENST00000626109 LYSTQ99698 3801 aa7.4□□□□□ -1.23
LINC00538-201ENST00000626109 DNAH1Q9P2D7 4330 aa7.39□□□□□ -1.23
LINC00538-201ENST00000626109 FAM229BQ4G0N7 80 aa7.39□□□□□ -1.23
LINC00538-201ENST00000626109 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
LINC00538-201ENST00000626109 Q6ZRN7 208 aaPredicted RBP7.37□□□□□ -1.23
LINC00538-201ENST00000626109 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
LINC00538-201ENST00000626109 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
LINC00538-201ENST00000626109 ROMO1P60602 79 aa7.37□□□□□ -1.23
LINC00538-201ENST00000626109 C15orf56Q8N910 161 aa7.37□□□□□ -1.23
LINC00538-201ENST00000626109 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
LINC00538-201ENST00000626109 HAMPP81172 84 aa7.36□□□□□ -1.23
LINC00538-201ENST00000626109 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
LINC00538-201ENST00000626109 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
LINC00538-201ENST00000626109 hDV103S1A0JD37 113 aa7.35□□□□□ -1.23
LINC00538-201ENST00000626109 IGLV1-50A0A075B6I6 118 aa7.35□□□□□ -1.23
LINC00538-201ENST00000626109 A0A087X002 238 aa7.35□□□□□ -1.23
LINC00538-201ENST00000626109 RTL8CO15255 209 aa7.35□□□□□ -1.23
LINC00538-201ENST00000626109 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
LINC00538-201ENST00000626109 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
LINC00538-201ENST00000626109 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
LINC00538-201ENST00000626109 C20orf197Q8N268 126 aa7.33□□□□□ -1.24
LINC00538-201ENST00000626109 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
LINC00538-201ENST00000626109 DNAH6Q9C0G6 4158 aa7.32□□□□□ -1.24
LINC00538-201ENST00000626109 C14orf177Q52M58 125 aa7.31□□□□□ -1.24
LINC00538-201ENST00000626109 KCNQ1DNQ9H478 68 aa7.31□□□□□ -1.24
LINC00538-201ENST00000626109 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
LINC00538-201ENST00000626109 A0A087WTM6 91 aa7.31□□□□□ -1.24
LINC00538-201ENST00000626109 LRCOL1A6NCL2 159 aa7.31□□□□□ -1.24
LINC00538-201ENST00000626109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
LINC00538-201ENST00000626109 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
LINC00538-201ENST00000626109 BPY2O14599 106 aa7.29□□□□□ -1.24
LINC00538-201ENST00000626109 KMT2CQ8NEZ4 4911 aaKnown RBP7.28□□□□□ -1.24
LINC00538-201ENST00000626109 A8MU10 97 aa7.27□□□□□ -1.25
LINC00538-201ENST00000626109 HYDINQ4G0P3 5121 aa7.27□□□□□ -1.25
LINC00538-201ENST00000626109 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
LINC00538-201ENST00000626109 F8WEM9 126 aa7.27□□□□□ -1.25
LINC00538-201ENST00000626109 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.26□□□□□ -1.25
LINC00538-201ENST00000626109 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
LINC00538-201ENST00000626109 NREPQ16612 68 aa7.25□□□□□ -1.25
LINC00538-201ENST00000626109 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
LINC00538-201ENST00000626109 RYR2Q92736 4967 aa7.25□□□□□ -1.25
LINC00538-201ENST00000626109 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
LINC00538-201ENST00000626109 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
LINC00538-201ENST00000626109 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
LINC00538-201ENST00000626109 CASC2Q6XLA1 102 aa7.23□□□□□ -1.25
LINC00538-201ENST00000626109 DNAH2Q9P225 4427 aa7.23□□□□□ -1.25
LINC00538-201ENST00000626109 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
LINC00538-201ENST00000626109 CNBPP62633 177 aaKnown RBP7.22□□□□□ -1.25
LINC00538-201ENST00000626109 Q6ZRX8 168 aa7.22□□□□□ -1.25
LINC00538-201ENST00000626109 DEFB105AQ8NG35 78 aa7.22□□□□□ -1.25
LINC00538-201ENST00000626109 Q8N377 158 aa7.21□□□□□ -1.25
LINC00538-201ENST00000626109 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
LINC00538-201ENST00000626109 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
LINC00538-201ENST00000626109 A0A1B0GVY2 172 aa7.19□□□□□ -1.26
LINC00538-201ENST00000626109 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
LINC00538-201ENST00000626109 SPRR1AP35321 89 aa7.19□□□□□ -1.26
LINC00538-201ENST00000626109 Q5VV11 94 aa7.19□□□□□ -1.26
LINC00538-201ENST00000626109 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
LINC00538-201ENST00000626109 MOBPQ13875 183 aa7.19□□□□□ -1.26
LINC00538-201ENST00000626109 A8MUU9 505 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms