RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	CNBP	P62633	177 aa	Known RBP	11.14	□□□□□ -0.63
CDK16-223	ENST00000622098	DNAH9	Q9NYC9	4486 aa		11.14	□□□□□ -0.63
CDK16-223	ENST00000622098	FAM229B	Q4G0N7	80 aa		11.13	□□□□□ -0.63
CDK16-223	ENST00000622098		A0A087WSZ3	146 aa		11.13	□□□□□ -0.63
CDK16-223	ENST00000622098	LCE6A	A0A183	80 aa		11.13	□□□□□ -0.63
CDK16-223	ENST00000622098	HCG22	E2RYF7	251 aa		11.13	□□□□□ -0.63
CDK16-223	ENST00000622098	COL7A1	Q02388	2944 aa		11.12	□□□□□ -0.63
CDK16-223	ENST00000622098	CHTF8	P0CG12	524 aa		11.12	□□□□□ -0.63
CDK16-223	ENST00000622098	KRTAP11-1	Q8IUC1	163 aa		11.1	□□□□□ -0.63
CDK16-223	ENST00000622098	UBE2DNL	Q8IWF7	75 aa		11.1	□□□□□ -0.63
CDK16-223	ENST00000622098	UBE2A	P49459	152 aa		11.1	□□□□□ -0.63
CDK16-223	ENST00000622098	PHF5A	Q7RTV0	110 aa	Known RBP	11.1	□□□□□ -0.63
CDK16-223	ENST00000622098	TENM2	Q9NT68	2774 aa		11.09	□□□□□ -0.63
CDK16-223	ENST00000622098	LINC00336	Q6ZUF6	198 aa		11.09	□□□□□ -0.63
CDK16-223	ENST00000622098	IGLV8-61	A0A075B6I0	122 aa		11.08	□□□□□ -0.64
CDK16-223	ENST00000622098	WFDC13	Q8IUB5	93 aa		11.07	□□□□□ -0.64
CDK16-223	ENST00000622098	MPLKIP	Q8TAP9	179 aa		11.07	□□□□□ -0.64
CDK16-223	ENST00000622098	ZCCHC13	Q8WW36	166 aa	Known RBP	11.06	□□□□□ -0.64
CDK16-223	ENST00000622098	RPL37A	P61513	92 aa	Known RBP	11.05	□□□□□ -0.64
CDK16-223	ENST00000622098	DNAH7	Q8WXX0	4024 aa		11.03	□□□□□ -0.64
CDK16-223	ENST00000622098	C14orf177	Q52M58	125 aa		11.02	□□□□□ -0.65
CDK16-223	ENST00000622098	APLN	Q9ULZ1	77 aa		11.01	□□□□□ -0.65
CDK16-223	ENST00000622098	hDV103S1	A0JD37	113 aa		10.98	□□□□□ -0.65
CDK16-223	ENST00000622098		H0Y9J4	135 aa		10.98	□□□□□ -0.65
CDK16-223	ENST00000622098	LRCOL1	A6NCL2	159 aa		10.97	□□□□□ -0.65
CDK16-223	ENST00000622098	SPRR1B	P22528	89 aa		10.97	□□□□□ -0.65
CDK16-223	ENST00000622098	PRR4	Q16378	134 aa		10.97	□□□□□ -0.65
CDK16-223	ENST00000622098	C9orf163	Q8N9P6	203 aa		10.97	□□□□□ -0.65
CDK16-223	ENST00000622098	C1orf64	Q8NEQ6	169 aa		10.97	□□□□□ -0.65
CDK16-223	ENST00000622098	PRO0628	Q9UI54	55 aa		10.97	□□□□□ -0.65
CDK16-223	ENST00000622098	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.94	□□□□□ -0.66
CDK16-223	ENST00000622098	MP68	P56378	58 aa		10.94	□□□□□ -0.66
CDK16-223	ENST00000622098	PANO1	I0J062	215 aa		10.93	□□□□□ -0.66
CDK16-223	ENST00000622098	B9D2	Q9BPU9	175 aa		10.93	□□□□□ -0.66
CDK16-223	ENST00000622098	CASC2	Q6XLA1	102 aa		10.93	□□□□□ -0.66
CDK16-223	ENST00000622098	PRR15	Q8IV56	129 aa		10.93	□□□□□ -0.66
CDK16-223	ENST00000622098	LINC00472	Q9H8W2	130 aa		10.92	□□□□□ -0.66
CDK16-223	ENST00000622098	LINC00208	Q96KT6	92 aa		10.91	□□□□□ -0.66
CDK16-223	ENST00000622098	PLEC	Q15149	4684 aa	Known RBP	10.91	□□□□□ -0.66
CDK16-223	ENST00000622098	BRK1	Q8WUW1	75 aa		10.91	□□□□□ -0.66
CDK16-223	ENST00000622098		A8MWP4	228 aa		10.9	□□□□□ -0.66
CDK16-223	ENST00000622098	NDUFB1	O75438	58 aa		10.89	□□□□□ -0.67
CDK16-223	ENST00000622098	NBDY	A0A0U1RRE5	68 aa		10.89	□□□□□ -0.67
CDK16-223	ENST00000622098	TRAV22	A0A0B4J277	110 aa		10.88	□□□□□ -0.67
CDK16-223	ENST00000622098	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.88	□□□□□ -0.67
CDK16-223	ENST00000622098	CYP4F30P	Q9H0H9	118 aa		10.86	□□□□□ -0.67
CDK16-223	ENST00000622098		H0Y9P7	68 aa		10.86	□□□□□ -0.67
CDK16-223	ENST00000622098	KRTAP13-1	Q8IUC0	172 aa		10.86	□□□□□ -0.67
CDK16-223	ENST00000622098	MDFI	Q99750	246 aa		10.85	□□□□□ -0.67
CDK16-223	ENST00000622098	PKIG	Q9Y2B9	76 aa		10.85	□□□□□ -0.67
CDK16-223	ENST00000622098		Q6ZRN7	208 aa	Predicted RBP	10.84	□□□□□ -0.67
CDK16-223	ENST00000622098	IGLV9-49	A0A0B4J1Y8	123 aa		10.83	□□□□□ -0.68
CDK16-223	ENST00000622098	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.83	□□□□□ -0.68
CDK16-223	ENST00000622098		Q1T7F1	81 aa		10.8	□□□□□ -0.68
CDK16-223	ENST00000622098	SPACA4	Q8TDM5	124 aa		10.79	□□□□□ -0.68
CDK16-223	ENST00000622098	MMP24-AS1	A0A0U1RRL7	71 aa		10.78	□□□□□ -0.68
CDK16-223	ENST00000622098		H3BPC8	53 aa		10.77	□□□□□ -0.69
CDK16-223	ENST00000622098	NUPR2	A6NF83	97 aa		10.77	□□□□□ -0.69
CDK16-223	ENST00000622098	PSPHP1	O15172	72 aa		10.75	□□□□□ -0.69
CDK16-223	ENST00000622098	STARD9	Q9P2P6	4700 aa		10.74	□□□□□ -0.69
CDK16-223	ENST00000622098		Q96NJ1	140 aa		10.74	□□□□□ -0.69
CDK16-223	ENST00000622098	SPANXA2-OT1	Q8N9U9	137 aa		10.73	□□□□□ -0.69
CDK16-223	ENST00000622098	FRAS1	Q86XX4	4008 aa		10.72	□□□□□ -0.69
CDK16-223	ENST00000622098		A0A087WTM6	91 aa		10.7	□□□□□ -0.7
CDK16-223	ENST00000622098	MOBP	Q13875	183 aa		10.7	□□□□□ -0.7
CDK16-223	ENST00000622098	HECTD4	Q9Y4D8	3996 aa		10.7	□□□□□ -0.7
CDK16-223	ENST00000622098	LINC00483	Q53H64	154 aa		10.69	□□□□□ -0.7
CDK16-223	ENST00000622098	ANAPC11	Q9NYG5	84 aa		10.68	□□□□□ -0.7
CDK16-223	ENST00000622098	PSORS1C2	Q9UIG4	136 aa		10.68	□□□□□ -0.7
CDK16-223	ENST00000622098	WWC2-AS2	Q96NR7	200 aa		10.66	□□□□□ -0.7
CDK16-223	ENST00000622098	VPS13D	Q5THJ4	4388 aa		10.66	□□□□□ -0.7
CDK16-223	ENST00000622098	RTL8C	O15255	209 aa		10.65	□□□□□ -0.7
CDK16-223	ENST00000622098	IGHV6-1	A0A0B4J1U7	121 aa		10.65	□□□□□ -0.7
CDK16-223	ENST00000622098	C8orf17	Q9NRJ1	99 aa		10.65	□□□□□ -0.7
CDK16-223	ENST00000622098	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.65	□□□□□ -0.7
CDK16-223	ENST00000622098	KMT2A	Q03164	3969 aa		10.65	□□□□□ -0.71
CDK16-223	ENST00000622098	IGLV5-52	A0A0A0MRZ9	124 aa		10.65	□□□□□ -0.71
CDK16-223	ENST00000622098	ASB16-AS1	Q495Z4	193 aa		10.64	□□□□□ -0.71
CDK16-223	ENST00000622098		A8MUN3	132 aa		10.64	□□□□□ -0.71
CDK16-223	ENST00000622098	PCOTH	Q58A44	107 aa		10.63	□□□□□ -0.71
CDK16-223	ENST00000622098	NDUFS5	O43920	106 aa		10.62	□□□□□ -0.71
CDK16-223	ENST00000622098	TP53AIP1	Q9HCN2	124 aa		10.62	□□□□□ -0.71
CDK16-223	ENST00000622098		V9GYY9	64 aa		10.62	□□□□□ -0.71
CDK16-223	ENST00000622098	DNAH8	Q96JB1	4490 aa		10.61	□□□□□ -0.71
CDK16-223	ENST00000622098		A0A1B0GVX0	72 aa		10.61	□□□□□ -0.71
CDK16-223	ENST00000622098	PRKDC	P78527	4128 aa	Known RBP	10.61	□□□□□ -0.71
CDK16-223	ENST00000622098	ZNF861P	O60384	105 aa		10.59	□□□□□ -0.71
CDK16-223	ENST00000622098	CDK2AP2	O75956	126 aa		10.59	□□□□□ -0.71
CDK16-223	ENST00000622098	IGLV7-46	A0A075B6I9	117 aa		10.59	□□□□□ -0.71
CDK16-223	ENST00000622098	DNAH2	Q9P225	4427 aa		10.58	□□□□□ -0.72
CDK16-223	ENST00000622098		Q8N9P0	234 aa	Predicted RBP	10.58	□□□□□ -0.72
CDK16-223	ENST00000622098	PLAC8	Q9NZF1	115 aa		10.58	□□□□□ -0.72
CDK16-223	ENST00000622098	CD164	Q04900	197 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098	TG	P01266	2768 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098	C1orf195	Q5TG92	126 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098		Q6ZR54	194 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098	COA5	Q86WW8	74 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098		A0A087X002	238 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098	NOTCH2NL	Q7Z3S9	236 aa		10.56	□□□□□ -0.72
CDK16-223	ENST00000622098		Q5VV11	94 aa		10.55	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms