RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 KRTAP1-3Q8IUG1 177 aa1.94□□□□□ -2.1
NEB-220ENST00000618972 A0A1W2PNM2 257 aa1.94□□□□□ -2.1
NEB-220ENST00000618972 KRTAP11-1Q8IUC1 163 aa1.94□□□□□ -2.1
NEB-220ENST00000618972 KRTAP7-1Q8IUC3 87 aa1.94□□□□□ -2.1
NEB-220ENST00000618972 GCN1Q92616 2671 aaKnown RBP1.94□□□□□ -2.1
NEB-220ENST00000618972 LINC00612Q8N6U2 182 aa1.94□□□□□ -2.1
NEB-220ENST00000618972 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
NEB-220ENST00000618972 M0QZ58 72 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 Q6ZR54 194 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 J3QL48 77 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 LY6G6CO95867 125 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 MKI67P46013 3256 aaKnown RBP1.93□□□□□ -2.1
NEB-220ENST00000618972 SPRR1BP22528 89 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 NBEAL1Q6ZS30 2694 aa1.93□□□□□ -2.1
NEB-220ENST00000618972 CFAP46Q8IYW2 2715 aa1.92□□□□□ -2.1
NEB-220ENST00000618972 CDH23Q9H251 3354 aa1.92□□□□□ -2.1
NEB-220ENST00000618972 MGAM2Q2M2H8 2515 aa1.92□□□□□ -2.1
NEB-220ENST00000618972 SPRR1AP35321 89 aa1.92□□□□□ -2.1
NEB-220ENST00000618972 UBR5O95071 2799 aaPredicted RBP1.92□□□□□ -2.1
NEB-220ENST00000618972 ANKRD11Q6UB99 2663 aaPredicted RBP1.92□□□□□ -2.1
NEB-220ENST00000618972 SETXQ7Z333 2677 aaKnown RBP1.92□□□□□ -2.1
NEB-220ENST00000618972 KRTAP1-1Q07627 177 aa1.92□□□□□ -2.1
NEB-220ENST00000618972 PDZD2O15018 2839 aa1.91□□□□□ -2.1
NEB-220ENST00000618972 HELZ2Q9BYK8 2649 aaKnown RBP1.91□□□□□ -2.1
NEB-220ENST00000618972 A0A0C4DFX4 3053 aa1.91□□□□□ -2.1
NEB-220ENST00000618972 MAP1AP78559 2803 aaPredicted RBP1.91□□□□□ -2.1
NEB-220ENST00000618972 PANO1I0J062 215 aa1.91□□□□□ -2.1
NEB-220ENST00000618972 C5orf42Q9H799 3197 aa1.91□□□□□ -2.1
NEB-220ENST00000618972 KRTAP25-1Q3LHN0 102 aa1.91□□□□□ -2.1
NEB-220ENST00000618972 KRTAP26-1Q6PEX3 210 aa1.91□□□□□ -2.1
NEB-220ENST00000618972 ADM2Q7Z4H4 148 aa1.9□□□□□ -2.1
NEB-220ENST00000618972 SPACA4Q8TDM5 124 aa1.9□□□□□ -2.1
NEB-220ENST00000618972 RANBP2P49792 3224 aaKnown RBP1.9□□□□□ -2.11
NEB-220ENST00000618972 RTL8CO15255 209 aa1.9□□□□□ -2.11
NEB-220ENST00000618972 UNC79Q9P2D8 2635 aa1.9□□□□□ -2.11
NEB-220ENST00000618972 TNRC18O15417 2968 aaPredicted RBP1.9□□□□□ -2.11
NEB-220ENST00000618972 ITPR1Q14643 2758 aa1.9□□□□□ -2.11
NEB-220ENST00000618972 DNAH12Q6ZR08 3092 aa1.9□□□□□ -2.11
NEB-220ENST00000618972 CHD7Q9P2D1 2997 aa1.89□□□□□ -2.11
NEB-220ENST00000618972 BRCA2P51587 3418 aa1.89□□□□□ -2.11
NEB-220ENST00000618972 VCANP13611 3396 aa1.89□□□□□ -2.11
NEB-220ENST00000618972 WDFY4Q6ZS81 3184 aa1.89□□□□□ -2.11
NEB-220ENST00000618972 PLAC8Q9NZF1 115 aa1.89□□□□□ -2.11
NEB-220ENST00000618972 SPINK7P58062 85 aa1.88□□□□□ -2.11
NEB-220ENST00000618972 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
NEB-220ENST00000618972 NBDYA0A0U1RRE5 68 aa1.88□□□□□ -2.11
NEB-220ENST00000618972 KRTAP29-1A8MX34 341 aaPredicted RBP1.88□□□□□ -2.11
NEB-220ENST00000618972 CFAP54Q96N23 3096 aa1.87□□□□□ -2.11
NEB-220ENST00000618972 FLNBO75369 2602 aaKnown RBP1.87□□□□□ -2.11
NEB-220ENST00000618972 NBEAQ8NFP9 2946 aa1.87□□□□□ -2.11
NEB-220ENST00000618972 EP400Q96L91 3159 aa1.87□□□□□ -2.11
NEB-220ENST00000618972 SPEGQ15772 3267 aa1.87□□□□□ -2.11
NEB-220ENST00000618972 HTTP42858 3142 aa1.87□□□□□ -2.11
NEB-220ENST00000618972 TRIOO75962 3097 aa1.86□□□□□ -2.11
NEB-220ENST00000618972 NDUFAF8A1L188 74 aa1.86□□□□□ -2.11
NEB-220ENST00000618972 COL4A2P08572 1712 aa1.86□□□□□ -2.11
NEB-220ENST00000618972 H1FX-AS1Q4G0G2 97 aa1.86□□□□□ -2.11
NEB-220ENST00000618972 LAMA3Q16787 3333 aa1.86□□□□□ -2.11
NEB-220ENST00000618972 LINC00304Q8N9R0 145 aa1.85□□□□□ -2.11
NEB-220ENST00000618972 XIRP2A4UGR9 3374 aa1.85□□□□□ -2.11
NEB-220ENST00000618972 Q5W150 140 aa1.85□□□□□ -2.11
NEB-220ENST00000618972 NBEAL2Q6ZNJ1 2754 aa1.85□□□□□ -2.11
NEB-220ENST00000618972 ITPR3Q14573 2671 aa1.85□□□□□ -2.11
NEB-220ENST00000618972 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.84□□□□□ -2.11
NEB-220ENST00000618972 IGSF10Q6WRI0 2623 aa1.84□□□□□ -2.11
NEB-220ENST00000618972 A8MUU9 505 aa1.84□□□□□ -2.11
NEB-220ENST00000618972 TRANK1O15050 2925 aa1.84□□□□□ -2.11
NEB-220ENST00000618972 NSD1Q96L73 2696 aaPredicted RBP1.84□□□□□ -2.11
NEB-220ENST00000618972 KRTAP4-16G5E9R7 235 aaPredicted RBP1.84□□□□□ -2.12
NEB-220ENST00000618972 CELSR3Q9NYQ7 3312 aa1.83□□□□□ -2.12
NEB-220ENST00000618972 DNAH14Q0VDD8 3507 aa1.83□□□□□ -2.12
NEB-220ENST00000618972 MMP24-AS1A0A0U1RRL7 71 aa1.83□□□□□ -2.12
NEB-220ENST00000618972 C20orf166-AS1Q96NR2 134 aa1.83□□□□□ -2.12
NEB-220ENST00000618972 LAMA2P24043 3122 aaKnown RBP1.83□□□□□ -2.12
NEB-220ENST00000618972 DMXL2Q8TDJ6 3036 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 A0A0D9SG42 100 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 PRUNE2Q8WUY3 3088 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 SZT2Q5T011 3432 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 R4GN34 69 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 KRTAP24-1Q3LI83 254 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 CRYBG3Q68DQ2 2970 aa1.82□□□□□ -2.12
NEB-220ENST00000618972 KRTAP1-5Q9BYS1 174 aa1.81□□□□□ -2.12
NEB-220ENST00000618972 KRTAP23-1A1A580 65 aa1.81□□□□□ -2.12
NEB-220ENST00000618972 RPS29P62273 56 aaKnown RBP1.81□□□□□ -2.12
NEB-220ENST00000618972 A0A087WTM6 91 aa1.81□□□□□ -2.12
NEB-220ENST00000618972 TENM3Q9P273 2699 aa1.8□□□□□ -2.12
NEB-220ENST00000618972 TACC2O95359 2948 aa1.8□□□□□ -2.12
NEB-220ENST00000618972 Q8N1X5 172 aa1.8□□□□□ -2.12
NEB-220ENST00000618972 NF1P21359 2839 aa1.79□□□□□ -2.12
NEB-220ENST00000618972 CFAP47Q6ZTR5 3102 aa1.79□□□□□ -2.12
NEB-220ENST00000618972 NIPBLQ6KC79 2804 aaeCLIP1.78□□□□□ -2.12
NEB-220ENST00000618972 Q6ZSA8 131 aa1.78□□□□□ -2.12
NEB-220ENST00000618972 FRYLO94915 3013 aa1.78□□□□□ -2.12
NEB-220ENST00000618972 ASH1LQ9NR48 2969 aaKnown RBP1.78□□□□□ -2.12
NEB-220ENST00000618972 FLNCQ14315 2725 aa1.78□□□□□ -2.13
NEB-220ENST00000618972 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
NEB-220ENST00000618972 KMT2BQ9UMN6 2715 aaPredicted RBP1.77□□□□□ -2.13
NEB-220ENST00000618972 FLNAP21333 2647 aaKnown RBP1.77□□□□□ -2.13
NEB-220ENST00000618972 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms