RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 A0A096LNI7 61 aa7.48□□□□□ -1.21
C11orf54-215ENST00000617482 HIGD2AQ9BW72 106 aa7.48□□□□□ -1.21
C11orf54-215ENST00000617482 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
C11orf54-215ENST00000617482 PRLHP81277 87 aa7.47□□□□□ -1.21
C11orf54-215ENST00000617482 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
C11orf54-215ENST00000617482 LINC00476Q8WZB0 136 aa7.47□□□□□ -1.21
C11orf54-215ENST00000617482 CSMD3Q7Z407 3707 aa7.46□□□□□ -1.21
C11orf54-215ENST00000617482 DSCR10P59022 87 aa7.46□□□□□ -1.22
C11orf54-215ENST00000617482 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.45□□□□□ -1.22
C11orf54-215ENST00000617482 K7EQZ3 153 aa7.45□□□□□ -1.22
C11orf54-215ENST00000617482 PSCAO43653 123 aa7.45□□□□□ -1.22
C11orf54-215ENST00000617482 COL7A1Q02388 2944 aa7.45□□□□□ -1.22
C11orf54-215ENST00000617482 DEFB116Q30KQ4 102 aa7.44□□□□□ -1.22
C11orf54-215ENST00000617482 MGAM2Q2M2H8 2515 aa7.44□□□□□ -1.22
C11orf54-215ENST00000617482 C16orf90A8MZG2 172 aa7.44□□□□□ -1.22
C11orf54-215ENST00000617482 IGFL1Q6UW32 110 aa7.43□□□□□ -1.22
C11orf54-215ENST00000617482 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
C11orf54-215ENST00000617482 LINC00474Q9P2X8 69 aa7.42□□□□□ -1.22
C11orf54-215ENST00000617482 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
C11orf54-215ENST00000617482 CHTF8P0CG12 524 aa7.41□□□□□ -1.22
C11orf54-215ENST00000617482 ATP5EP56381 51 aaPredicted RBP7.41□□□□□ -1.22
C11orf54-215ENST00000617482 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.22
C11orf54-215ENST00000617482 UBE2DNLQ8IWF7 75 aa7.4□□□□□ -1.22
C11orf54-215ENST00000617482 STAB2Q8WWQ8 2551 aa7.4□□□□□ -1.22
C11orf54-215ENST00000617482 KRTAP11-1Q8IUC1 163 aa7.4□□□□□ -1.23
C11orf54-215ENST00000617482 A0A087WSZ3 146 aa7.39□□□□□ -1.23
C11orf54-215ENST00000617482 PHF5AQ7RTV0 110 aaKnown RBP7.39□□□□□ -1.23
C11orf54-215ENST00000617482 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
C11orf54-215ENST00000617482 C8orf87E5RJ46 101 aa7.38□□□□□ -1.23
C11orf54-215ENST00000617482 UBE2AP49459 152 aa7.38□□□□□ -1.23
C11orf54-215ENST00000617482 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
C11orf54-215ENST00000617482 TENM2Q9NT68 2774 aa7.38□□□□□ -1.23
C11orf54-215ENST00000617482 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
C11orf54-215ENST00000617482 LCE6AA0A183 80 aa7.36□□□□□ -1.23
C11orf54-215ENST00000617482 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
C11orf54-215ENST00000617482 WFDC13Q8IUB5 93 aa7.35□□□□□ -1.23
C11orf54-215ENST00000617482 DNAH7Q8WXX0 4024 aa7.35□□□□□ -1.23
C11orf54-215ENST00000617482 APLNQ9ULZ1 77 aa7.35□□□□□ -1.23
C11orf54-215ENST00000617482 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
C11orf54-215ENST00000617482 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
C11orf54-215ENST00000617482 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
C11orf54-215ENST00000617482 C14orf177Q52M58 125 aa7.32□□□□□ -1.24
C11orf54-215ENST00000617482 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
C11orf54-215ENST00000617482 C9orf163Q8N9P6 203 aa7.3□□□□□ -1.24
C11orf54-215ENST00000617482 PANO1I0J062 215 aa7.3□□□□□ -1.24
C11orf54-215ENST00000617482 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
C11orf54-215ENST00000617482 PRR4Q16378 134 aa7.29□□□□□ -1.24
C11orf54-215ENST00000617482 H0Y9J4 135 aa7.28□□□□□ -1.24
C11orf54-215ENST00000617482 SPRR1BP22528 89 aa7.27□□□□□ -1.25
C11orf54-215ENST00000617482 C1orf64Q8NEQ6 169 aa7.27□□□□□ -1.25
C11orf54-215ENST00000617482 B9D2Q9BPU9 175 aa7.27□□□□□ -1.25
C11orf54-215ENST00000617482 NBDYA0A0U1RRE5 68 aa7.26□□□□□ -1.25
C11orf54-215ENST00000617482 hDV103S1A0JD37 113 aa7.26□□□□□ -1.25
C11orf54-215ENST00000617482 PLECQ15149 4684 aaKnown RBP7.25□□□□□ -1.25
C11orf54-215ENST00000617482 KRTAP29-1A8MX34 341 aaPredicted RBP7.25□□□□□ -1.25
C11orf54-215ENST00000617482 CASC2Q6XLA1 102 aa7.25□□□□□ -1.25
C11orf54-215ENST00000617482 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
C11orf54-215ENST00000617482 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
C11orf54-215ENST00000617482 MP68P56378 58 aa7.24□□□□□ -1.25
C11orf54-215ENST00000617482 NDUFS5O43920 106 aa7.23□□□□□ -1.25
C11orf54-215ENST00000617482 A8MWP4 228 aa7.23□□□□□ -1.25
C11orf54-215ENST00000617482 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
C11orf54-215ENST00000617482 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
C11orf54-215ENST00000617482 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.25
C11orf54-215ENST00000617482 KRTAP13-1Q8IUC0 172 aa7.21□□□□□ -1.26
C11orf54-215ENST00000617482 DYNC2H1Q8NCM8 4307 aaKnown RBP7.2□□□□□ -1.26
C11orf54-215ENST00000617482 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
C11orf54-215ENST00000617482 H0Y9P7 68 aa7.2□□□□□ -1.26
C11orf54-215ENST00000617482 NDUFB1O75438 58 aa7.19□□□□□ -1.26
C11orf54-215ENST00000617482 SPACA4Q8TDM5 124 aa7.18□□□□□ -1.26
C11orf54-215ENST00000617482 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
C11orf54-215ENST00000617482 NUPR2A6NF83 97 aa7.17□□□□□ -1.26
C11orf54-215ENST00000617482 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
C11orf54-215ENST00000617482 A8MUN3 132 aa7.16□□□□□ -1.26
C11orf54-215ENST00000617482 STARD9Q9P2P6 4700 aa7.15□□□□□ -1.26
C11orf54-215ENST00000617482 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.26
C11orf54-215ENST00000617482 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
C11orf54-215ENST00000617482 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
C11orf54-215ENST00000617482 A0A087WTM6 91 aa7.13□□□□□ -1.27
C11orf54-215ENST00000617482 Q1T7F1 81 aa7.13□□□□□ -1.27
C11orf54-215ENST00000617482 Q96NJ1 140 aa7.13□□□□□ -1.27
C11orf54-215ENST00000617482 PSPHP1O15172 72 aa7.12□□□□□ -1.27
C11orf54-215ENST00000617482 LCA10Q71F78 164 aa7.12□□□□□ -1.27
C11orf54-215ENST00000617482 H3BPC8 53 aa7.11□□□□□ -1.27
C11orf54-215ENST00000617482 MOBPQ13875 183 aa7.11□□□□□ -1.27
C11orf54-215ENST00000617482 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
C11orf54-215ENST00000617482 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
C11orf54-215ENST00000617482 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
C11orf54-215ENST00000617482 RTL8CO15255 209 aa7.1□□□□□ -1.27
C11orf54-215ENST00000617482 LINC00483Q53H64 154 aa7.1□□□□□ -1.27
C11orf54-215ENST00000617482 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
C11orf54-215ENST00000617482 IGHV6-1A0A0B4J1U7 121 aa7.08□□□□□ -1.28
C11orf54-215ENST00000617482 WWC2-AS2Q96NR7 200 aa7.08□□□□□ -1.28
C11orf54-215ENST00000617482 HECTD4Q9Y4D8 3996 aa7.08□□□□□ -1.28
C11orf54-215ENST00000617482 IGLV5-52A0A0A0MRZ9 124 aa7.08□□□□□ -1.28
C11orf54-215ENST00000617482 VPS13DQ5THJ4 4388 aa7.07□□□□□ -1.28
C11orf54-215ENST00000617482 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
C11orf54-215ENST00000617482 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
C11orf54-215ENST00000617482 ZNF706Q9Y5V0 76 aaPredicted RBP7.06□□□□□ -1.28
C11orf54-215ENST00000617482 MEGF8Q7Z7M0 2845 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms