RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
LIG4-204ENST00000611712 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
LIG4-204ENST00000611712 CIRBP-AS1Q8TBR5 109 aa5.52□□□□□ -1.53
LIG4-204ENST00000611712 SPRR1AP35321 89 aa5.52□□□□□ -1.53
LIG4-204ENST00000611712 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
LIG4-204ENST00000611712 VWFP04275 2813 aa5.52□□□□□ -1.53
LIG4-204ENST00000611712 C9orf163Q8N9P6 203 aa5.52□□□□□ -1.53
LIG4-204ENST00000611712 MOBPQ13875 183 aa5.51□□□□□ -1.53
LIG4-204ENST00000611712 CHKB-CPT1BH3BT56 60 aa5.51□□□□□ -1.53
LIG4-204ENST00000611712 TENM1Q9UKZ4 2725 aa5.51□□□□□ -1.53
LIG4-204ENST00000611712 C4orf48Q5BLP8 95 aa5.51□□□□□ -1.53
LIG4-204ENST00000611712 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
LIG4-204ENST00000611712 PDZD2O15018 2839 aa5.5□□□□□ -1.53
LIG4-204ENST00000611712 DSCR10P59022 87 aa5.5□□□□□ -1.53
LIG4-204ENST00000611712 C1orf134Q5TEV5 83 aa5.5□□□□□ -1.53
LIG4-204ENST00000611712 APLNQ9ULZ1 77 aa5.5□□□□□ -1.53
LIG4-204ENST00000611712 A8MWP4 228 aa5.49□□□□□ -1.53
LIG4-204ENST00000611712 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
LIG4-204ENST00000611712 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
LIG4-204ENST00000611712 RTL8CO15255 209 aa5.48□□□□□ -1.53
LIG4-204ENST00000611712 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
LIG4-204ENST00000611712 TRAV22A0A0B4J277 110 aa5.47□□□□□ -1.53
LIG4-204ENST00000611712 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
LIG4-204ENST00000611712 STAB2Q8WWQ8 2551 aa5.47□□□□□ -1.53
LIG4-204ENST00000611712 OXTP01178 125 aa5.46□□□□□ -1.53
LIG4-204ENST00000611712 KMT2BQ9UMN6 2715 aaPredicted RBP5.46□□□□□ -1.54
LIG4-204ENST00000611712 VPS13CQ709C8 3753 aa5.46□□□□□ -1.54
LIG4-204ENST00000611712 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
LIG4-204ENST00000611712 A6NED7 52 aa5.45□□□□□ -1.54
LIG4-204ENST00000611712 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
LIG4-204ENST00000611712 H3BPC8 53 aa5.45□□□□□ -1.54
LIG4-204ENST00000611712 LINC00336Q6ZUF6 198 aa5.45□□□□□ -1.54
LIG4-204ENST00000611712 TENM3Q9P273 2699 aa5.44□□□□□ -1.54
LIG4-204ENST00000611712 C1orf195Q5TG92 126 aa5.44□□□□□ -1.54
LIG4-204ENST00000611712 TP53AIP1Q9HCN2 124 aa5.44□□□□□ -1.54
LIG4-204ENST00000611712 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
LIG4-204ENST00000611712 TNP2Q05952 138 aa5.44□□□□□ -1.54
LIG4-204ENST00000611712 A0A087WTM6 91 aa5.43□□□□□ -1.54
LIG4-204ENST00000611712 Q5XG85 94 aa5.43□□□□□ -1.54
LIG4-204ENST00000611712 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
LIG4-204ENST00000611712 NBPF19A0A087WUL8 3843 aa5.42□□□□□ -1.54
LIG4-204ENST00000611712 RETNLBQ9BQ08 111 aa5.41□□□□□ -1.54
LIG4-204ENST00000611712 KRTAP7-1Q8IUC3 87 aa5.4□□□□□ -1.55
LIG4-204ENST00000611712 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.55
LIG4-204ENST00000611712 ZFHX3Q15911 3703 aa5.4□□□□□ -1.55
LIG4-204ENST00000611712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.55
LIG4-204ENST00000611712 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
LIG4-204ENST00000611712 ZNF861PO60384 105 aa5.39□□□□□ -1.55
LIG4-204ENST00000611712 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
LIG4-204ENST00000611712 FP248Q71RG6 208 aaPredicted RBP5.39□□□□□ -1.55
LIG4-204ENST00000611712 A8MUN3 132 aa5.38□□□□□ -1.55
LIG4-204ENST00000611712 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
LIG4-204ENST00000611712 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
LIG4-204ENST00000611712 MRPL34Q9BQ48 92 aaKnown RBP5.37□□□□□ -1.55
LIG4-204ENST00000611712 FAM229BQ4G0N7 80 aa5.37□□□□□ -1.55
LIG4-204ENST00000611712 A0A1B0GVX0 72 aa5.37□□□□□ -1.55
LIG4-204ENST00000611712 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
LIG4-204ENST00000611712 SPRR1BP22528 89 aa5.35□□□□□ -1.55
LIG4-204ENST00000611712 COA5Q86WW8 74 aa5.35□□□□□ -1.55
LIG4-204ENST00000611712 SPACA4Q8TDM5 124 aa5.34□□□□□ -1.55
LIG4-204ENST00000611712 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.55
LIG4-204ENST00000611712 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
LIG4-204ENST00000611712 PANO1I0J062 215 aa5.33□□□□□ -1.56
LIG4-204ENST00000611712 PKD1L1Q8TDX9 2849 aa5.33□□□□□ -1.56
LIG4-204ENST00000611712 LINC00313P59037 77 aa5.32□□□□□ -1.56
LIG4-204ENST00000611712 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
LIG4-204ENST00000611712 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
LIG4-204ENST00000611712 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
LIG4-204ENST00000611712 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
LIG4-204ENST00000611712 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
LIG4-204ENST00000611712 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
LIG4-204ENST00000611712 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
LIG4-204ENST00000611712 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
LIG4-204ENST00000611712 SSBP3-AS1Q7Z2R9 100 aa5.3□□□□□ -1.56
LIG4-204ENST00000611712 SEC61GP60059 68 aa5.3□□□□□ -1.56
LIG4-204ENST00000611712 ACYP2P14621 99 aa5.29□□□□□ -1.56
LIG4-204ENST00000611712 Q1T7F1 81 aa5.28□□□□□ -1.56
LIG4-204ENST00000611712 C8orf87E5RJ46 101 aa5.28□□□□□ -1.56
LIG4-204ENST00000611712 KRTAP29-1A8MX34 341 aaPredicted RBP5.26□□□□□ -1.57
LIG4-204ENST00000611712 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
LIG4-204ENST00000611712 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
LIG4-204ENST00000611712 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
LIG4-204ENST00000611712 ANK3Q12955 4377 aaKnown RBP5.26□□□□□ -1.57
LIG4-204ENST00000611712 SPINK1P00995 79 aa5.26□□□□□ -1.57
LIG4-204ENST00000611712 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
LIG4-204ENST00000611712 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
LIG4-204ENST00000611712 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
LIG4-204ENST00000611712 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
LIG4-204ENST00000611712 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
LIG4-204ENST00000611712 TRRAPQ9Y4A5 3859 aa5.24□□□□□ -1.57
LIG4-204ENST00000611712 LCE6AA0A183 80 aa5.23□□□□□ -1.57
LIG4-204ENST00000611712 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
LIG4-204ENST00000611712 A0A1B0GU69 56 aa5.22□□□□□ -1.57
LIG4-204ENST00000611712 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
LIG4-204ENST00000611712 Q96NJ1 140 aa5.21□□□□□ -1.57
LIG4-204ENST00000611712 CD164Q04900 197 aa5.21□□□□□ -1.58
LIG4-204ENST00000611712 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
LIG4-204ENST00000611712 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
LIG4-204ENST00000611712 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
LIG4-204ENST00000611712 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms