RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
CDK11B-205ENST00000611150 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
CDK11B-205ENST00000611150 SPATA8Q6RVD6 105 aa10.92□□□□□ -0.66
CDK11B-205ENST00000611150 C16orf74Q96GX8 76 aa10.92□□□□□ -0.66
CDK11B-205ENST00000611150 REG3AQ06141 175 aa10.92□□□□□ -0.66
CDK11B-205ENST00000611150 ANGP03950 147 aaKnown RBP10.9□□□□□ -0.66
CDK11B-205ENST00000611150 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.89□□□□□ -0.678e-7■■■■■ 37.5
CDK11B-205ENST00000611150 C6orf48Q9UBA6 75 aa10.89□□□□□ -0.67
CDK11B-205ENST00000611150 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
CDK11B-205ENST00000611150 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
CDK11B-205ENST00000611150 C10orf99Q6UWK7 81 aa10.88□□□□□ -0.67
CDK11B-205ENST00000611150 ANK3Q12955 4377 aaKnown RBP10.87□□□□□ -0.67
CDK11B-205ENST00000611150 JMJD1CQ15652 2540 aa10.87□□□□□ -0.67
CDK11B-205ENST00000611150 REG3GQ6UW15 175 aa10.87□□□□□ -0.67
CDK11B-205ENST00000611150 ABCA2Q9BZC7 2435 aa10.85□□□□□ -0.67
CDK11B-205ENST00000611150 GYPEP15421 78 aa10.84□□□□□ -0.67
CDK11B-205ENST00000611150 RPL37AP61513 92 aaKnown RBP10.82□□□□□ -0.68
CDK11B-205ENST00000611150 SLURP1P55000 103 aa10.82□□□□□ -0.68
CDK11B-205ENST00000611150 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
CDK11B-205ENST00000611150 MIR22HGQ0VDD5 57 aa10.81□□□□□ -0.68
CDK11B-205ENST00000611150 DEFB136Q30KP8 78 aa10.81□□□□□ -0.68
CDK11B-205ENST00000611150 CUBNO60494 3623 aa10.78□□□□□ -0.68
CDK11B-205ENST00000611150 A8MWP4 228 aa10.77□□□□□ -0.69
CDK11B-205ENST00000611150 ATRQ13535 2644 aa10.76□□□□□ -0.69
CDK11B-205ENST00000611150 Q6ZRX8 168 aa10.76□□□□□ -0.69
CDK11B-205ENST00000611150 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
CDK11B-205ENST00000611150 FBN1P35555 2871 aaKnown RBP10.75□□□□□ -0.69
CDK11B-205ENST00000611150 A0A096LPF7 62 aa10.75□□□□□ -0.69
CDK11B-205ENST00000611150 A0A1B0GU69 56 aa10.75□□□□□ -0.69
CDK11B-205ENST00000611150 A0A087WSZ3 146 aa10.74□□□□□ -0.69
CDK11B-205ENST00000611150 UQCR11O14957 56 aa10.74□□□□□ -0.69
CDK11B-205ENST00000611150 EGFEM1PQ0D2K5 195 aa10.74□□□□□ -0.69
CDK11B-205ENST00000611150 TP53AIP1Q9HCN2 124 aa10.74□□□□□ -0.69
CDK11B-205ENST00000611150 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
CDK11B-205ENST00000611150 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
CDK11B-205ENST00000611150 MSMBP08118 114 aa10.73□□□□□ -0.69
CDK11B-205ENST00000611150 COL6A5A8TX70 2615 aa10.72□□□□□ -0.69
CDK11B-205ENST00000611150 IGKV2-24A0A0C4DH68 120 aa10.72□□□□□ -0.69
CDK11B-205ENST00000611150 CAMK2N2Q96S95 79 aa10.72□□□□□ -0.69
CDK11B-205ENST00000611150 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
CDK11B-205ENST00000611150 NOTCH3Q9UM47 2321 aa10.71□□□□□ -0.7
CDK11B-205ENST00000611150 ZNF861PO60384 105 aa10.7□□□□□ -0.7
CDK11B-205ENST00000611150 DNHD1Q96M86 4753 aa10.7□□□□□ -0.7
CDK11B-205ENST00000611150 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
CDK11B-205ENST00000611150 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
CDK11B-205ENST00000611150 IGFL1Q6UW32 110 aa10.69□□□□□ -0.7
CDK11B-205ENST00000611150 KRTAP25-1Q3LHN0 102 aa10.68□□□□□ -0.7
CDK11B-205ENST00000611150 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
CDK11B-205ENST00000611150 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
CDK11B-205ENST00000611150 X6R8D5 127 aa10.65□□□□□ -0.71
CDK11B-205ENST00000611150 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
CDK11B-205ENST00000611150 A0A0G2JQZ4 141 aa10.62□□□□□ -0.71
CDK11B-205ENST00000611150 MMP24-AS1A0A0U1RRL7 71 aa10.62□□□□□ -0.71
CDK11B-205ENST00000611150 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
CDK11B-205ENST00000611150 P0C880 135 aa10.62□□□□□ -0.71
CDK11B-205ENST00000611150 ACYP2P14621 99 aa10.62□□□□□ -0.71
CDK11B-205ENST00000611150 STAB1Q9NY15 2570 aa10.61□□□□□ -0.71
CDK11B-205ENST00000611150 KRTAP4-16G5E9R7 235 aaPredicted RBP10.61□□□□□ -0.71
CDK11B-205ENST00000611150 PRR34Q9NV39 138 aa10.61□□□□□ -0.71
CDK11B-205ENST00000611150 SPRR1AP35321 89 aa10.56□□□□□ -0.72
CDK11B-205ENST00000611150 LINC00472Q9H8W2 130 aa10.56□□□□□ -0.72
CDK11B-205ENST00000611150 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
CDK11B-205ENST00000611150 IGLV8-61A0A075B6I0 122 aa10.54□□□□□ -0.72
CDK11B-205ENST00000611150 C4orf3Q8WVX3 66 aa10.54□□□□□ -0.72
CDK11B-205ENST00000611150 RPL37AP8A6NKH3 93 aa10.53□□□□□ -0.72
CDK11B-205ENST00000611150 ANK2Q01484 3957 aa10.51□□□□□ -0.73
CDK11B-205ENST00000611150 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
CDK11B-205ENST00000611150 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
CDK11B-205ENST00000611150 FBN3Q75N90 2809 aa10.48□□□□□ -0.73
CDK11B-205ENST00000611150 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
CDK11B-205ENST00000611150 TENM1Q9UKZ4 2725 aa10.47□□□□□ -0.73
CDK11B-205ENST00000611150 LELP1Q5T871 98 aa10.47□□□□□ -0.73
CDK11B-205ENST00000611150 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
CDK11B-205ENST00000611150 A8MUU9 505 aa10.45□□□□□ -0.74
CDK11B-205ENST00000611150 PLA2G2DQ9UNK4 145 aa10.44□□□□□ -0.74
CDK11B-205ENST00000611150 DMAC1Q96GE9 116 aa10.44□□□□□ -0.74
CDK11B-205ENST00000611150 Q6YL49 198 aa10.43□□□□□ -0.74
CDK11B-205ENST00000611150 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
CDK11B-205ENST00000611150 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
CDK11B-205ENST00000611150 ALMS1Q8TCU4 4167 aa10.36□□□□□ -0.75
CDK11B-205ENST00000611150 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
CDK11B-205ENST00000611150 DNAH10OSP0CZ25 163 aa10.34□□□□□ -0.75
CDK11B-205ENST00000611150 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
CDK11B-205ENST00000611150 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
CDK11B-205ENST00000611150 C20orf166-AS1Q96NR2 134 aa10.31□□□□□ -0.76
CDK11B-205ENST00000611150 MRPL34Q9BQ48 92 aaKnown RBP10.3□□□□□ -0.76
CDK11B-205ENST00000611150 TLX1NBP0CAT3 122 aa10.29□□□□□ -0.76
CDK11B-205ENST00000611150 NDUFAF8A1L188 74 aa10.29□□□□□ -0.76
CDK11B-205ENST00000611150 LINC00304Q8N9R0 145 aa10.28□□□□□ -0.76
CDK11B-205ENST00000611150 PKD1L1Q8TDX9 2849 aa10.28□□□□□ -0.76
CDK11B-205ENST00000611150 TRRAPQ9Y4A5 3859 aa10.28□□□□□ -0.76
CDK11B-205ENST00000611150 CASC10Q5T4H9 136 aa10.26□□□□□ -0.77
CDK11B-205ENST00000611150 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
CDK11B-205ENST00000611150 KRTAP10-3P60369 221 aa10.24□□□□□ -0.77
CDK11B-205ENST00000611150 A0A1B0GVX0 72 aa10.21□□□□□ -0.78
CDK11B-205ENST00000611150 TENM2Q9NT68 2774 aa10.2□□□□□ -0.78
CDK11B-205ENST00000611150 K7EIL1 84 aa10.2□□□□□ -0.78
CDK11B-205ENST00000611150 SPINT4Q6UDR6 99 aa10.19□□□□□ -0.78
CDK11B-205ENST00000611150 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
CDK11B-205ENST00000611150 VWFP04275 2813 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 290 ms