RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CMYA5Q8N3K9 4069 aa12.92□□□□□ -0.34
SSBP3-216ENST00000610401 WIPF1O43516 503 aa12.91□□□□□ -0.34
SSBP3-216ENST00000610401 HCG22E2RYF7 251 aa12.91□□□□□ -0.34
SSBP3-216ENST00000610401 PHF5AQ7RTV0 110 aaKnown RBP12.9□□□□□ -0.34
SSBP3-216ENST00000610401 LINC00208Q96KT6 92 aa12.89□□□□□ -0.35
SSBP3-216ENST00000610401 KRTAP1-5Q9BYS1 174 aa12.89□□□□□ -0.35
SSBP3-216ENST00000610401 SPRR1AP35321 89 aa12.89□□□□□ -0.35
SSBP3-216ENST00000610401 UBE2AP49459 152 aa12.89□□□□□ -0.35
SSBP3-216ENST00000610401 ATP5EP56381 51 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-216ENST00000610401 KRTAP11-1Q8IUC1 163 aa12.88□□□□□ -0.35
SSBP3-216ENST00000610401 TLX1NBP0CAT3 122 aa12.86□□□□□ -0.35
SSBP3-216ENST00000610401 SPRR4Q96PI1 79 aa12.85□□□□□ -0.35
SSBP3-216ENST00000610401 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.36
SSBP3-216ENST00000610401 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
SSBP3-216ENST00000610401 H0Y9J4 135 aa12.81□□□□□ -0.36
SSBP3-216ENST00000610401 HUWE1Q7Z6Z7 4374 aaKnown RBP12.8□□□□□ -0.36
SSBP3-216ENST00000610401 hDV103S1A0JD37 113 aa12.8□□□□□ -0.36
SSBP3-216ENST00000610401 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
SSBP3-216ENST00000610401 DNAH7Q8WXX0 4024 aa12.78□□□□□ -0.36
SSBP3-216ENST00000610401 F8WDY8 70 aa12.77□□□□□ -0.37
SSBP3-216ENST00000610401 IGLV5-37A0A075B6J1 123 aa12.75□□□□□ -0.37
SSBP3-216ENST00000610401 IGLV9-49A0A0B4J1Y8 123 aa12.75□□□□□ -0.37
SSBP3-216ENST00000610401 MP68P56378 58 aa12.75□□□□□ -0.37
SSBP3-216ENST00000610401 A8MU10 97 aa12.73□□□□□ -0.37
SSBP3-216ENST00000610401 DNAH1Q9P2D7 4330 aa12.73□□□□□ -0.37
SSBP3-216ENST00000610401 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
SSBP3-216ENST00000610401 K7EIL1 84 aa12.72□□□□□ -0.37
SSBP3-216ENST00000610401 A8MUN3 132 aa12.71□□□□□ -0.37
SSBP3-216ENST00000610401 H0Y9P7 68 aa12.71□□□□□ -0.38
SSBP3-216ENST00000610401 C1orf195Q5TG92 126 aa12.7□□□□□ -0.38
SSBP3-216ENST00000610401 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
SSBP3-216ENST00000610401 ZCCHC13Q8WW36 166 aaKnown RBP12.69□□□□□ -0.38
SSBP3-216ENST00000610401 PCOTHQ58A44 107 aa12.69□□□□□ -0.38
SSBP3-216ENST00000610401 PANO1I0J062 215 aa12.69□□□□□ -0.38
SSBP3-216ENST00000610401 TRAV22A0A0B4J277 110 aa12.68□□□□□ -0.38
SSBP3-216ENST00000610401 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
SSBP3-216ENST00000610401 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
SSBP3-216ENST00000610401 TGP01266 2768 aa12.64□□□□□ -0.39
SSBP3-216ENST00000610401 LCE6AA0A183 80 aa12.63□□□□□ -0.39
SSBP3-216ENST00000610401 A0A1B0GW54 56 aa12.63□□□□□ -0.39
SSBP3-216ENST00000610401 NDUFS5O43920 106 aa12.63□□□□□ -0.39
SSBP3-216ENST00000610401 PRR15Q8IV56 129 aa12.61□□□□□ -0.39
SSBP3-216ENST00000610401 B9D2Q9BPU9 175 aa12.61□□□□□ -0.39
SSBP3-216ENST00000610401 FRAS1Q86XX4 4008 aa12.58□□□□□ -0.39
SSBP3-216ENST00000610401 V9GYY9 64 aa12.58□□□□□ -0.4
SSBP3-216ENST00000610401 DNAH3Q8TD57 4116 aa12.57□□□□□ -0.4
SSBP3-216ENST00000610401 KRTAP29-1A8MX34 341 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-216ENST00000610401 A8MWP4 228 aa12.53□□□□□ -0.4
SSBP3-216ENST00000610401 IGHV6-1A0A0B4J1U7 121 aa12.53□□□□□ -0.4
SSBP3-216ENST00000610401 CHKB-CPT1BH3BT56 60 aa12.53□□□□□ -0.4
SSBP3-216ENST00000610401 NDUFB1O75438 58 aa12.53□□□□□ -0.4
SSBP3-216ENST00000610401 PRR15LQ9BU68 103 aa12.52□□□□□ -0.41
SSBP3-216ENST00000610401 PLECQ15149 4684 aaKnown RBP12.51□□□□□ -0.41
SSBP3-216ENST00000610401 SPTSSBQ8NFR3 76 aa12.51□□□□□ -0.41
SSBP3-216ENST00000610401 LINC00472Q9H8W2 130 aa12.51□□□□□ -0.41
SSBP3-216ENST00000610401 Q1T7F1 81 aa12.51□□□□□ -0.41
SSBP3-216ENST00000610401 SPINK6Q6UWN8 80 aa12.5□□□□□ -0.41
SSBP3-216ENST00000610401 SEC61GP60059 68 aa12.5□□□□□ -0.41
SSBP3-216ENST00000610401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-216ENST00000610401 CYP4F30PQ9H0H9 118 aa12.46□□□□□ -0.42
SSBP3-216ENST00000610401 IGLV8-61A0A075B6I0 122 aa12.45□□□□□ -0.42
SSBP3-216ENST00000610401 MMP24-AS1A0A0U1RRL7 71 aa12.43□□□□□ -0.42
SSBP3-216ENST00000610401 MOBPQ13875 183 aa12.43□□□□□ -0.42
SSBP3-216ENST00000610401 C9orf163Q8N9P6 203 aa12.43□□□□□ -0.42
SSBP3-216ENST00000610401 SPAG11AQ6PDA7 123 aa12.42□□□□□ -0.42
SSBP3-216ENST00000610401 Q5VV11 94 aa12.41□□□□□ -0.42
SSBP3-216ENST00000610401 MDFIQ99750 246 aa12.41□□□□□ -0.42
SSBP3-216ENST00000610401 APLNQ9ULZ1 77 aa12.41□□□□□ -0.42
SSBP3-216ENST00000610401 A0A087X002 238 aa12.4□□□□□ -0.42
SSBP3-216ENST00000610401 NOTCH2NLQ7Z3S9 236 aa12.4□□□□□ -0.42
SSBP3-216ENST00000610401 FBN3Q75N90 2809 aa12.4□□□□□ -0.42
SSBP3-216ENST00000610401 COA5Q86WW8 74 aa12.4□□□□□ -0.42
SSBP3-216ENST00000610401 PMAIP1Q13794 54 aa12.38□□□□□ -0.43
SSBP3-216ENST00000610401 Q8N9P0 234 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-216ENST00000610401 A6NED7 52 aa12.36□□□□□ -0.43
SSBP3-216ENST00000610401 C14orf177Q52M58 125 aa12.36□□□□□ -0.43
SSBP3-216ENST00000610401 RETNLBQ9BQ08 111 aa12.36□□□□□ -0.43
SSBP3-216ENST00000610401 CD164Q04900 197 aa12.35□□□□□ -0.43
SSBP3-216ENST00000610401 CDK2AP2O75956 126 aa12.35□□□□□ -0.43
SSBP3-216ENST00000610401 NBDYA0A0U1RRE5 68 aa12.34□□□□□ -0.43
SSBP3-216ENST00000610401 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
SSBP3-216ENST00000610401 MEGF8Q7Z7M0 2845 aa12.32□□□□□ -0.44
SSBP3-216ENST00000610401 SPRR1BP22528 89 aa12.3□□□□□ -0.44
SSBP3-216ENST00000610401 C8orf17Q9NRJ1 99 aa12.3□□□□□ -0.44
SSBP3-216ENST00000610401 Q96NJ1 140 aa12.29□□□□□ -0.44
SSBP3-216ENST00000610401 PSORS1C2Q9UIG4 136 aa12.28□□□□□ -0.44
SSBP3-216ENST00000610401 STARD9Q9P2P6 4700 aa12.28□□□□□ -0.44
SSBP3-216ENST00000610401 CIRBP-AS1Q8TBR5 109 aa12.27□□□□□ -0.44
SSBP3-216ENST00000610401 SPANXA2-OT1Q8N9U9 137 aa12.24□□□□□ -0.45
SSBP3-216ENST00000610401 KRTAP13-1Q8IUC0 172 aa12.22□□□□□ -0.45
SSBP3-216ENST00000610401 DNAH8Q96JB1 4490 aa12.21□□□□□ -0.45
SSBP3-216ENST00000610401 LIMD2Q9BT23 127 aa12.21□□□□□ -0.46
SSBP3-216ENST00000610401 LCA10Q71F78 164 aa12.2□□□□□ -0.46
SSBP3-216ENST00000610401 IGLV7-46A0A075B6I9 117 aa12.2□□□□□ -0.46
SSBP3-216ENST00000610401 SPACA4Q8TDM5 124 aa12.2□□□□□ -0.46
SSBP3-216ENST00000610401 A0A1B0GVX0 72 aa12.2□□□□□ -0.46
SSBP3-216ENST00000610401 H3BPC8 53 aa12.2□□□□□ -0.46
SSBP3-216ENST00000610401 PRR26Q8N8Z3 221 aa12.2□□□□□ -0.46
SSBP3-216ENST00000610401 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-216ENST00000610401 RTL8CO15255 209 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms