RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SMIM11BQ8TCY0 68 aa7□□□□□ -1.29
RPS28-204ENST00000602140 NHP2Q9NX24 153 aaKnown RBP7□□□□□ -1.29
RPS28-204ENST00000602140 C20orf202A1L168 122 aa6.99□□□□□ -1.29
RPS28-204ENST00000602140 M0R2T5 61 aa6.99□□□□□ -1.29
RPS28-204ENST00000602140 TCL1BO95988 128 aa6.99□□□□□ -1.29
RPS28-204ENST00000602140 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
RPS28-204ENST00000602140 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
RPS28-204ENST00000602140 LOC105371267A0A1B0GV96 52 aa6.98□□□□□ -1.29
RPS28-204ENST00000602140 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
RPS28-204ENST00000602140 COA6Q5JTJ3 125 aaKnown RBP6.98□□□□□ -1.29
RPS28-204ENST00000602140 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
RPS28-204ENST00000602140 F8WEM9 126 aa6.96□□□□□ -1.3
RPS28-204ENST00000602140 S100A2P29034 98 aa6.95□□□□□ -1.3
RPS28-204ENST00000602140 VAMP3Q15836 100 aa6.94□□□□□ -1.3
RPS28-204ENST00000602140 HIST3H2BBQ8N257 126 aa6.94□□□□□ -1.3
RPS28-204ENST00000602140 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
RPS28-204ENST00000602140 Q6ZQY7 126 aa6.92□□□□□ -1.3
RPS28-204ENST00000602140 hADV29S1A0JD25 119 aa6.91□□□□□ -1.3
RPS28-204ENST00000602140 Q6JHZ5 121 aa6.91□□□□□ -1.3
RPS28-204ENST00000602140 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
RPS28-204ENST00000602140 TRBV7-7A0A0K0K1E9 115 aa6.9□□□□□ -1.3
RPS28-204ENST00000602140 IGFL1Q6UW32 110 aa6.9□□□□□ -1.3
RPS28-204ENST00000602140 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
RPS28-204ENST00000602140 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
RPS28-204ENST00000602140 OCIAD2Q56VL3 154 aa6.88□□□□□ -1.31
RPS28-204ENST00000602140 OBSCN-AS1Q96MR7 158 aa6.88□□□□□ -1.31
RPS28-204ENST00000602140 Q6Q795 121 aa6.86□□□□□ -1.31
RPS28-204ENST00000602140 ATP11AUNQ6ZP68 121 aa6.86□□□□□ -1.31
RPS28-204ENST00000602140 Q75L30 129 aa6.86□□□□□ -1.31
RPS28-204ENST00000602140 SMIM6P0DI80 62 aa6.85□□□□□ -1.31
RPS28-204ENST00000602140 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.85□□□□□ -1.31
RPS28-204ENST00000602140 HSBP1L1C9JCN9 74 aa6.84□□□□□ -1.31
RPS28-204ENST00000602140 C12orf57Q99622 126 aa6.83□□□□□ -1.32
RPS28-204ENST00000602140 SNHG12Q9BXW3 62 aa6.83□□□□□ -1.32
RPS28-204ENST00000602140 H3BUT2 72 aa6.82□□□□□ -1.32
RPS28-204ENST00000602140 LST1O00453 97 aa6.82□□□□□ -1.32
RPS28-204ENST00000602140 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
RPS28-204ENST00000602140 BVES-AS1Q5T3Y7 98 aa6.81□□□□□ -1.32
RPS28-204ENST00000602140 Q96NJ1 140 aa6.81□□□□□ -1.32
RPS28-204ENST00000602140 PYY3Q5JQD4 70 aa6.8□□□□□ -1.32
RPS28-204ENST00000602140 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
RPS28-204ENST00000602140 HIST1H4GQ99525 98 aa6.79□□□□□ -1.32
RPS28-204ENST00000602140 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
RPS28-204ENST00000602140 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
RPS28-204ENST00000602140 TEN1Q86WV5 123 aa6.74□□□□□ -1.33
RPS28-204ENST00000602140 A8MUU9 505 aa6.73□□□□□ -1.33
RPS28-204ENST00000602140 A0A087WSZ3 146 aa6.72□□□□□ -1.33
RPS28-204ENST00000602140 SNCGO76070 127 aa6.72□□□□□ -1.33
RPS28-204ENST00000602140 CFC1P0CG37 223 aa6.72□□□□□ -1.33
RPS28-204ENST00000602140 COX8AP10176 69 aa6.72□□□□□ -1.33
RPS28-204ENST00000602140 NDUFV3P56181 108 aaKnown RBP6.72□□□□□ -1.33
RPS28-204ENST00000602140 TRBV20-1A0A075B6N2 111 aa6.71□□□□□ -1.34
RPS28-204ENST00000602140 RAB37Q96AX2 223 aa6.71□□□□□ -1.34
RPS28-204ENST00000602140 FAM218AQ96MZ4 157 aa6.71□□□□□ -1.34
RPS28-204ENST00000602140 VAMP8Q9BV40 100 aa6.71□□□□□ -1.34
RPS28-204ENST00000602140 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
RPS28-204ENST00000602140 H0YGX0 51 aa6.7□□□□□ -1.34
RPS28-204ENST00000602140 DLEU1O43261 78 aa6.69□□□□□ -1.34
RPS28-204ENST00000602140 DSCR10P59022 87 aa6.69□□□□□ -1.34
RPS28-204ENST00000602140 TSTD3H0UI37 97 aa6.68□□□□□ -1.34
RPS28-204ENST00000602140 H3BMG7 143 aa6.68□□□□□ -1.34
RPS28-204ENST00000602140 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
RPS28-204ENST00000602140 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
RPS28-204ENST00000602140 C14orf144Q96I85 54 aa6.67□□□□□ -1.34
RPS28-204ENST00000602140 PAM16Q9Y3D7 125 aa6.67□□□□□ -1.34
RPS28-204ENST00000602140 FABP2P12104 132 aa6.65□□□□□ -1.34
RPS28-204ENST00000602140 SIGMAR1Q99720 223 aa6.65□□□□□ -1.34
RPS28-204ENST00000602140 A0A1W2PNM2 257 aa6.64□□□□□ -1.35
RPS28-204ENST00000602140 PCP4L1A6NKN8 68 aa6.64□□□□□ -1.35
RPS28-204ENST00000602140 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
RPS28-204ENST00000602140 A0A1B0GX51 115 aa6.63□□□□□ -1.35
RPS28-204ENST00000602140 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
RPS28-204ENST00000602140 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
RPS28-204ENST00000602140 LINC00313P59037 77 aa6.63□□□□□ -1.35
RPS28-204ENST00000602140 FAM236DA0A1B0GTK5 79 aa6.62□□□□□ -1.35
RPS28-204ENST00000602140 FAM236CP0DP71 79 aa6.62□□□□□ -1.35
RPS28-204ENST00000602140 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
RPS28-204ENST00000602140 IGKV4-1P06312 121 aa6.61□□□□□ -1.35
RPS28-204ENST00000602140 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
RPS28-204ENST00000602140 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
RPS28-204ENST00000602140 MT2AP02795 61 aa6.6□□□□□ -1.35
RPS28-204ENST00000602140 CEND1Q8N111 149 aa6.6□□□□□ -1.35
RPS28-204ENST00000602140 UQCR10Q9UDW1 63 aa6.6□□□□□ -1.35
RPS28-204ENST00000602140 ANKRD29Q8N6D5 301 aa6.59□□□□□ -1.35
RPS28-204ENST00000602140 USH2AO75445 5202 aa6.58□□□□□ -1.36
RPS28-204ENST00000602140 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
RPS28-204ENST00000602140 A0A1B0GV72 72 aa6.58□□□□□ -1.36
RPS28-204ENST00000602140 H3BS24 57 aa6.58□□□□□ -1.36
RPS28-204ENST00000602140 TRIAP1O43715 76 aa6.58□□□□□ -1.36
RPS28-204ENST00000602140 NOTCH2NLQ7Z3S9 236 aa6.58□□□□□ -1.36
RPS28-204ENST00000602140 SSPOA2VEC9 5147 aa6.57□□□□□ -1.36
RPS28-204ENST00000602140 DEFB116Q30KQ4 102 aa6.57□□□□□ -1.36
RPS28-204ENST00000602140 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
RPS28-204ENST00000602140 HRES1P13985 223 aa6.56□□□□□ -1.36
RPS28-204ENST00000602140 FXYD2P54710 66 aa6.56□□□□□ -1.36
RPS28-204ENST00000602140 MPLKIPQ8TAP9 179 aa6.56□□□□□ -1.36
RPS28-204ENST00000602140 DNAL4O96015 105 aa6.55□□□□□ -1.36
RPS28-204ENST00000602140 MT1FP04733 61 aa6.55□□□□□ -1.36
RPS28-204ENST00000602140 ORMDL1Q9P0S3 153 aa6.55□□□□□ -1.36
RPS28-204ENST00000602140 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms