RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 A0A1B0GW54 56 aa10.25□□□□□ -0.77
SYDE1-204ENST00000600440 SMR3AQ99954 134 aa10.25□□□□□ -0.77
SYDE1-204ENST00000600440 SPAG11AQ6PDA7 123 aa10.24□□□□□ -0.77
SYDE1-204ENST00000600440 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
SYDE1-204ENST00000600440 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
SYDE1-204ENST00000600440 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
SYDE1-204ENST00000600440 COA5Q86WW8 74 aa10.23□□□□□ -0.77
SYDE1-204ENST00000600440 H0Y9J4 135 aa10.22□□□□□ -0.77
SYDE1-204ENST00000600440 TENM4Q6N022 2769 aa10.21□□□□□ -0.78
SYDE1-204ENST00000600440 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
SYDE1-204ENST00000600440 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
SYDE1-204ENST00000600440 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
SYDE1-204ENST00000600440 FBN1P35555 2871 aaKnown RBP10.19□□□□□ -0.78
SYDE1-204ENST00000600440 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
SYDE1-204ENST00000600440 ATP11AUNQ6ZP68 121 aa10.18□□□□□ -0.78
SYDE1-204ENST00000600440 ANK3Q12955 4377 aaKnown RBP10.17□□□□□ -0.78
SYDE1-204ENST00000600440 SPRR1AP35321 89 aa10.16□□□□□ -0.78
SYDE1-204ENST00000600440 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
SYDE1-204ENST00000600440 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.79
SYDE1-204ENST00000600440 KRTAP1-1Q07627 177 aa10.14□□□□□ -0.79
SYDE1-204ENST00000600440 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
SYDE1-204ENST00000600440 Q75L30 129 aa10.14□□□□□ -0.79
SYDE1-204ENST00000600440 MAST4O15021 2626 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 A6NN06 94 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 COL6A5A8TX70 2615 aa10.11□□□□□ -0.79
SYDE1-204ENST00000600440 NDUFS5O43920 106 aa10.1□□□□□ -0.79
SYDE1-204ENST00000600440 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
SYDE1-204ENST00000600440 DEFB131BA0A096LNP1 70 aa10.1□□□□□ -0.79
SYDE1-204ENST00000600440 SPINK7P58062 85 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 MOBPQ13875 183 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 CDC42SE1Q9NRR8 79 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 CSMD3Q7Z407 3707 aa10.08□□□□□ -0.8
SYDE1-204ENST00000600440 A8MWP4 228 aa10.06□□□□□ -0.8
SYDE1-204ENST00000600440 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
SYDE1-204ENST00000600440 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
SYDE1-204ENST00000600440 C7orf65Q6ZTY9 151 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 H3BPC8 53 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 TLX1NBP0CAT3 122 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 NSD1Q96L73 2696 aaPredicted RBP10.04□□□□□ -0.8
SYDE1-204ENST00000600440 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
SYDE1-204ENST00000600440 PRAC1Q96KF2 57 aa10.03□□□□□ -0.8
SYDE1-204ENST00000600440 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
SYDE1-204ENST00000600440 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
SYDE1-204ENST00000600440 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
SYDE1-204ENST00000600440 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
SYDE1-204ENST00000600440 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
SYDE1-204ENST00000600440 H3BNG1 76 aa9.98□□□□□ -0.81
SYDE1-204ENST00000600440 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
SYDE1-204ENST00000600440 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.82
SYDE1-204ENST00000600440 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
SYDE1-204ENST00000600440 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.82
SYDE1-204ENST00000600440 DNAH10OSP0CZ25 163 aa9.95□□□□□ -0.82
SYDE1-204ENST00000600440 STAB1Q9NY15 2570 aa9.95□□□□□ -0.82
SYDE1-204ENST00000600440 IGHV6-1A0A0B4J1U7 121 aa9.94□□□□□ -0.82
SYDE1-204ENST00000600440 IGLV9-49A0A0B4J1Y8 123 aa9.94□□□□□ -0.82
SYDE1-204ENST00000600440 HRES1P13985 223 aa9.94□□□□□ -0.82
SYDE1-204ENST00000600440 TENM2Q9NT68 2774 aa9.93□□□□□ -0.82
SYDE1-204ENST00000600440 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
SYDE1-204ENST00000600440 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
SYDE1-204ENST00000600440 INAFM1C9JVW0 142 aa9.92□□□□□ -0.82
SYDE1-204ENST00000600440 LINC00313P59037 77 aa9.92□□□□□ -0.82
SYDE1-204ENST00000600440 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
SYDE1-204ENST00000600440 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
SYDE1-204ENST00000600440 K7EIL1 84 aa9.86□□□□□ -0.83
SYDE1-204ENST00000600440 KRTAP10-11P60412 298 aa9.86□□□□□ -0.83
SYDE1-204ENST00000600440 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
SYDE1-204ENST00000600440 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
SYDE1-204ENST00000600440 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
SYDE1-204ENST00000600440 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
SYDE1-204ENST00000600440 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
SYDE1-204ENST00000600440 ANK2Q01484 3957 aa9.8□□□□□ -0.84
SYDE1-204ENST00000600440 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
SYDE1-204ENST00000600440 A0A087X002 238 aa9.79□□□□□ -0.84
SYDE1-204ENST00000600440 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
SYDE1-204ENST00000600440 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
SYDE1-204ENST00000600440 MDFIQ99750 246 aa9.76□□□□□ -0.85
SYDE1-204ENST00000600440 J3QKU1 62 aa9.75□□□□□ -0.85
SYDE1-204ENST00000600440 RETNLBQ9BQ08 111 aa9.75□□□□□ -0.85
SYDE1-204ENST00000600440 ANAPC11Q9NYG5 84 aa9.74□□□□□ -0.85
SYDE1-204ENST00000600440 Q6ZR54 194 aa9.74□□□□□ -0.85
SYDE1-204ENST00000600440 Q96NJ1 140 aa9.74□□□□□ -0.85
SYDE1-204ENST00000600440 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
SYDE1-204ENST00000600440 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
SYDE1-204ENST00000600440 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
SYDE1-204ENST00000600440 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
SYDE1-204ENST00000600440 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
SYDE1-204ENST00000600440 SPRR1BP22528 89 aa9.71□□□□□ -0.85
SYDE1-204ENST00000600440 H3BS24 57 aa9.71□□□□□ -0.86
SYDE1-204ENST00000600440 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
SYDE1-204ENST00000600440 Q5W150 140 aa9.69□□□□□ -0.86
SYDE1-204ENST00000600440 A0A1B0GU69 56 aa9.68□□□□□ -0.86
SYDE1-204ENST00000600440 LYSTQ99698 3801 aa9.67□□□□□ -0.86
SYDE1-204ENST00000600440 PANO1I0J062 215 aa9.66□□□□□ -0.86
SYDE1-204ENST00000600440 UBE2DNLQ8IWF7 75 aa9.65□□□□□ -0.86
SYDE1-204ENST00000600440 ACYP2P14621 99 aa9.64□□□□□ -0.87
SYDE1-204ENST00000600440 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms