RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TRBV7-7A0A0K0K1E9 115 aa11.01□□□□□ -0.65
PNKP-212ENST00000599454 C20orf202A1L168 122 aa11.01□□□□□ -0.65
PNKP-212ENST00000599454 KRTDAPP60985 99 aa11.01□□□□□ -0.65
PNKP-212ENST00000599454 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
PNKP-212ENST00000599454 CLEC2BQ92478 149 aa11.01□□□□□ -0.65
PNKP-212ENST00000599454 LINC00575Q6W349 94 aa10.98□□□□□ -0.65
PNKP-212ENST00000599454 OBSCN-AS1Q96MR7 158 aa10.98□□□□□ -0.65
PNKP-212ENST00000599454 IGFL1Q6UW32 110 aa10.96□□□□□ -0.65
PNKP-212ENST00000599454 SLC7A5P1Q8MH63 180 aa10.96□□□□□ -0.65
PNKP-212ENST00000599454 CFC1P0CG37 223 aa10.95□□□□□ -0.66
PNKP-212ENST00000599454 Q6ZQY7 126 aa10.95□□□□□ -0.66
PNKP-212ENST00000599454 hADV29S1A0JD25 119 aa10.94□□□□□ -0.66
PNKP-212ENST00000599454 OCIAD2Q56VL3 154 aa10.94□□□□□ -0.66
PNKP-212ENST00000599454 COA6Q5JTJ3 125 aaKnown RBP10.94□□□□□ -0.66
PNKP-212ENST00000599454 ATOH7Q8N100 152 aa10.91□□□□□ -0.66
PNKP-212ENST00000599454 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.89□□□□□ -0.67
PNKP-212ENST00000599454 LST1O00453 97 aa10.89□□□□□ -0.67
PNKP-212ENST00000599454 SNRPEP62304 92 aaKnown RBP10.89□□□□□ -0.67
PNKP-212ENST00000599454 PPDPFLQ8WWR9 84 aa10.89□□□□□ -0.67
PNKP-212ENST00000599454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
PNKP-212ENST00000599454 KRTAP9-7A8MTY7 169 aa10.87□□□□□ -0.67
PNKP-212ENST00000599454 Q96NJ1 140 aa10.87□□□□□ -0.67
PNKP-212ENST00000599454 SCGB1D1O95968 90 aa10.85□□□□□ -0.67
PNKP-212ENST00000599454 KRTAP9-8Q9BYQ0 159 aa10.85□□□□□ -0.67
PNKP-212ENST00000599454 C20orf166-AS1Q96NR2 134 aa10.84□□□□□ -0.67
PNKP-212ENST00000599454 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
PNKP-212ENST00000599454 SS18L2Q9UHA2 77 aa10.83□□□□□ -0.68
PNKP-212ENST00000599454 TRBV20-1A0A075B6N2 111 aa10.82□□□□□ -0.68
PNKP-212ENST00000599454 BVES-AS1Q5T3Y7 98 aa10.81□□□□□ -0.68
PNKP-212ENST00000599454 A8MUU9 505 aa10.8□□□□□ -0.68
PNKP-212ENST00000599454 H3BUT2 72 aa10.78□□□□□ -0.68
PNKP-212ENST00000599454 USH2AO75445 5202 aa10.77□□□□□ -0.69
PNKP-212ENST00000599454 SSPOA2VEC9 5147 aa10.76□□□□□ -0.69
PNKP-212ENST00000599454 HSBP1L1C9JCN9 74 aa10.73□□□□□ -0.69
PNKP-212ENST00000599454 TEN1Q86WV5 123 aa10.73□□□□□ -0.69
PNKP-212ENST00000599454 C12orf57Q99622 126 aa10.7□□□□□ -0.7
PNKP-212ENST00000599454 SNCGO76070 127 aa10.68□□□□□ -0.7
PNKP-212ENST00000599454 A0A087WSZ3 146 aa10.66□□□□□ -0.7
PNKP-212ENST00000599454 MT2AP02795 61 aa10.65□□□□□ -0.7
PNKP-212ENST00000599454 HIST1H4GQ99525 98 aa10.65□□□□□ -0.7
PNKP-212ENST00000599454 NDUFV3P56181 108 aaKnown RBP10.64□□□□□ -0.71
PNKP-212ENST00000599454 FAM236DA0A1B0GTK5 79 aa10.63□□□□□ -0.71
PNKP-212ENST00000599454 FAM236CP0DP71 79 aa10.63□□□□□ -0.71
PNKP-212ENST00000599454 DSCR10P59022 87 aa10.63□□□□□ -0.71
PNKP-212ENST00000599454 H0YGX0 51 aa10.61□□□□□ -0.71
PNKP-212ENST00000599454 S100A2P29034 98 aa10.6□□□□□ -0.71
PNKP-212ENST00000599454 HIST1H2BLQ99880 126 aa10.6□□□□□ -0.71
PNKP-212ENST00000599454 GHRHP01286 108 aa10.59□□□□□ -0.71
PNKP-212ENST00000599454 HIST3H2BBQ8N257 126 aa10.59□□□□□ -0.71
PNKP-212ENST00000599454 SIGMAR1Q99720 223 aa10.58□□□□□ -0.72
PNKP-212ENST00000599454 RBM12B-AS1Q9P1G2 102 aa10.58□□□□□ -0.72
PNKP-212ENST00000599454 FCGBPQ9Y6R7 5405 aaPredicted RBP10.58□□□□□ -0.72
PNKP-212ENST00000599454 H3BMG7 143 aa10.57□□□□□ -0.72
PNKP-212ENST00000599454 LINC00313P59037 77 aa10.57□□□□□ -0.72
PNKP-212ENST00000599454 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
PNKP-212ENST00000599454 MT1FP04733 61 aa10.56□□□□□ -0.72
PNKP-212ENST00000599454 KRTAP19-1Q8IUB9 90 aa10.56□□□□□ -0.72
PNKP-212ENST00000599454 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
PNKP-212ENST00000599454 LCE2BO14633 110 aa10.55□□□□□ -0.72
PNKP-212ENST00000599454 MPLKIPQ8TAP9 179 aa10.55□□□□□ -0.72
PNKP-212ENST00000599454 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
PNKP-212ENST00000599454 A0A1B0GX51 115 aa10.53□□□□□ -0.72
PNKP-212ENST00000599454 COX8AP10176 69 aa10.53□□□□□ -0.72
PNKP-212ENST00000599454 KRTAP9-3Q9BYQ3 159 aa10.53□□□□□ -0.72
PNKP-212ENST00000599454 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
PNKP-212ENST00000599454 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
PNKP-212ENST00000599454 DLEU1O43261 78 aa10.51□□□□□ -0.73
PNKP-212ENST00000599454 HRES1P13985 223 aa10.51□□□□□ -0.73
PNKP-212ENST00000599454 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
PNKP-212ENST00000599454 IGKV4-1P06312 121 aa10.5□□□□□ -0.73
PNKP-212ENST00000599454 FABP2P12104 132 aa10.5□□□□□ -0.73
PNKP-212ENST00000599454 TRBV7-4A0A0J9YYF1 115 aa10.45□□□□□ -0.74
PNKP-212ENST00000599454 NOTCH2NLQ7Z3S9 236 aa10.44□□□□□ -0.74
PNKP-212ENST00000599454 HIGD1BQ9P298 99 aa10.44□□□□□ -0.74
PNKP-212ENST00000599454 ANKRD29Q8N6D5 301 aa10.43□□□□□ -0.74
PNKP-212ENST00000599454 S100A6P06703 90 aa10.42□□□□□ -0.74
PNKP-212ENST00000599454 LINC00846Q9NV44 126 aa10.42□□□□□ -0.74
PNKP-212ENST00000599454 MTURNQ8N3F0 131 aa10.41□□□□□ -0.74
PNKP-212ENST00000599454 H3BQ85 93 aa10.39□□□□□ -0.75
PNKP-212ENST00000599454 LINC00472Q9H8W2 130 aa10.39□□□□□ -0.75
PNKP-212ENST00000599454 PRO1854Q9UHT4 67 aa10.39□□□□□ -0.75
PNKP-212ENST00000599454 IGHV6-1A0A0B4J1U7 121 aa10.37□□□□□ -0.75
PNKP-212ENST00000599454 C14orf144Q96I85 54 aa10.37□□□□□ -0.75
PNKP-212ENST00000599454 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
PNKP-212ENST00000599454 A6NJY4 79 aa10.35□□□□□ -0.75
PNKP-212ENST00000599454 DNAL4O96015 105 aa10.35□□□□□ -0.75
PNKP-212ENST00000599454 DEFB116Q30KQ4 102 aa10.35□□□□□ -0.75
PNKP-212ENST00000599454 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
PNKP-212ENST00000599454 C8orf87E5RJ46 101 aa10.33□□□□□ -0.76
PNKP-212ENST00000599454 TRIAP1O43715 76 aa10.33□□□□□ -0.76
PNKP-212ENST00000599454 CEND1Q8N111 149 aa10.33□□□□□ -0.76
PNKP-212ENST00000599454 TRACP01848 142 aa10.32□□□□□ -0.76
PNKP-212ENST00000599454 CCKP06307 115 aa10.32□□□□□ -0.76
PNKP-212ENST00000599454 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
PNKP-212ENST00000599454 MACF1Q9UPN3 7388 aaKnown RBP10.3□□□□□ -0.76
PNKP-212ENST00000599454 A0A1B0GV72 72 aa10.3□□□□□ -0.76
PNKP-212ENST00000599454 TMEM256-PLSCR3K7ERE1 68 aa10.3□□□□□ -0.76
PNKP-212ENST00000599454 KRTAP19-6Q3LI70 58 aa10.3□□□□□ -0.76
PNKP-212ENST00000599454 SPATA45Q537H7 98 aa10.29□□□□□ -0.76
PNKP-212ENST00000599454 PAM16Q9Y3D7 125 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms