RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 LITAFQ99732 161 aa4.62□□□□□ -1.67
TGFB1-203ENST00000598758 SPANXCQ9NY87 97 aa4.62□□□□□ -1.67
TGFB1-203ENST00000598758 LINC00308Q8TCZ7 52 aa4.61□□□□□ -1.67
TGFB1-203ENST00000598758 CHCHD1Q96BP2 118 aaKnown RBP4.61□□□□□ -1.67
TGFB1-203ENST00000598758 PMCHL2Q9BQD1 86 aa4.61□□□□□ -1.67
TGFB1-203ENST00000598758 TRBV20-1A0A075B6N2 111 aa4.6□□□□□ -1.67
TGFB1-203ENST00000598758 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
TGFB1-203ENST00000598758 Q96NJ1 140 aa4.6□□□□□ -1.67
TGFB1-203ENST00000598758 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
TGFB1-203ENST00000598758 SPANXDQ9BXN6 97 aa4.6□□□□□ -1.67
TGFB1-203ENST00000598758 A8MUU9 505 aa4.59□□□□□ -1.67
TGFB1-203ENST00000598758 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.67
TGFB1-203ENST00000598758 UQCC3Q6UW78 93 aa4.59□□□□□ -1.67
TGFB1-203ENST00000598758 LINC00518Q8N0U6 118 aa4.59□□□□□ -1.67
TGFB1-203ENST00000598758 FAM236DA0A1B0GTK5 79 aa4.58□□□□□ -1.68
TGFB1-203ENST00000598758 FAM236CP0DP71 79 aa4.58□□□□□ -1.68
TGFB1-203ENST00000598758 PLNP26678 52 aa4.58□□□□□ -1.68
TGFB1-203ENST00000598758 HERVK_113P61574 105 aa4.58□□□□□ -1.68
TGFB1-203ENST00000598758 TRBV7-6A0A0J9YX20 115 aa4.57□□□□□ -1.68
TGFB1-203ENST00000598758 TRBV7-7A0A0K0K1E9 115 aa4.57□□□□□ -1.68
TGFB1-203ENST00000598758 DPM2O94777 84 aa4.57□□□□□ -1.68
TGFB1-203ENST00000598758 IGFL1Q6UW32 110 aa4.57□□□□□ -1.68
TGFB1-203ENST00000598758 HRES1P13985 223 aa4.56□□□□□ -1.68
TGFB1-203ENST00000598758 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
TGFB1-203ENST00000598758 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
TGFB1-203ENST00000598758 A0A1B0GWB2 263 aa4.55□□□□□ -1.68
TGFB1-203ENST00000598758 HSBP1O75506 76 aa4.55□□□□□ -1.68
TGFB1-203ENST00000598758 IGKCP01834 107 aa4.55□□□□□ -1.68
TGFB1-203ENST00000598758 PAM16Q9Y3D7 125 aa4.55□□□□□ -1.68
TGFB1-203ENST00000598758 E9PLD3 99 aa4.54□□□□□ -1.68
TGFB1-203ENST00000598758 LEPROTL1O95214 131 aa4.54□□□□□ -1.68
TGFB1-203ENST00000598758 TIMM17BO60830 172 aa4.53□□□□□ -1.68
TGFB1-203ENST00000598758 SVBPQ8N300 66 aa4.53□□□□□ -1.68
TGFB1-203ENST00000598758 CLEC2BQ92478 149 aa4.53□□□□□ -1.68
TGFB1-203ENST00000598758 APOC3P02656 99 aa4.52□□□□□ -1.69
TGFB1-203ENST00000598758 YPEL4Q96NS1 127 aa4.52□□□□□ -1.69
TGFB1-203ENST00000598758 TTTY13Q9BZ97 58 aa4.52□□□□□ -1.69
TGFB1-203ENST00000598758 F8WEM9 126 aa4.51□□□□□ -1.69
TGFB1-203ENST00000598758 SERF1AO75920 110 aa4.51□□□□□ -1.69
TGFB1-203ENST00000598758 SMIM6P0DI80 62 aa4.51□□□□□ -1.69
TGFB1-203ENST00000598758 FABP4P15090 132 aa4.51□□□□□ -1.69
TGFB1-203ENST00000598758 Q6JHZ5 121 aa4.5□□□□□ -1.69
TGFB1-203ENST00000598758 LST1O00453 97 aa4.49□□□□□ -1.69
TGFB1-203ENST00000598758 DSCR10P59022 87 aa4.49□□□□□ -1.69
TGFB1-203ENST00000598758 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
TGFB1-203ENST00000598758 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
TGFB1-203ENST00000598758 ZNF815PA8K554 130 aa4.48□□□□□ -1.69
TGFB1-203ENST00000598758 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
TGFB1-203ENST00000598758 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
TGFB1-203ENST00000598758 A4D1N5 150 aa4.47□□□□□ -1.69
TGFB1-203ENST00000598758 A6NDN8 102 aa4.47□□□□□ -1.69
TGFB1-203ENST00000598758 OCIAD2Q56VL3 154 aa4.47□□□□□ -1.69
TGFB1-203ENST00000598758 SMIM11BQ8TCY0 68 aa4.47□□□□□ -1.69
TGFB1-203ENST00000598758 C12orf57Q99622 126 aa4.47□□□□□ -1.69
TGFB1-203ENST00000598758 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
TGFB1-203ENST00000598758 HSPB8Q9UJY1 196 aa4.47□□□□□ -1.69
TGFB1-203ENST00000598758 Q6ZQY7 126 aa4.46□□□□□ -1.7
TGFB1-203ENST00000598758 TRAV13-2A0A0B4J235 113 aa4.45□□□□□ -1.7
TGFB1-203ENST00000598758 PCP4L1A6NKN8 68 aa4.45□□□□□ -1.7
TGFB1-203ENST00000598758 H3BUT2 72 aa4.45□□□□□ -1.7
TGFB1-203ENST00000598758 KMT2DO14686 5537 aa4.44□□□□□ -1.7
TGFB1-203ENST00000598758 LINC00575Q6W349 94 aa4.44□□□□□ -1.7
TGFB1-203ENST00000598758 TRGC2P03986 189 aa4.43□□□□□ -1.7
TGFB1-203ENST00000598758 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
TGFB1-203ENST00000598758 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
TGFB1-203ENST00000598758 A8MWP4 228 aa4.41□□□□□ -1.7
TGFB1-203ENST00000598758 HSBP1L1C9JCN9 74 aa4.41□□□□□ -1.7
TGFB1-203ENST00000598758 SYS1-DBNDD2H3BUS1 97 aa4.41□□□□□ -1.7
TGFB1-203ENST00000598758 Q6ZVH6 145 aa4.41□□□□□ -1.7
TGFB1-203ENST00000598758 MUSTN1Q8IVN3 82 aa4.41□□□□□ -1.7
TGFB1-203ENST00000598758 hADV29S1A0JD25 119 aa4.4□□□□□ -1.71
TGFB1-203ENST00000598758 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
TGFB1-203ENST00000598758 COLCA2A8K830 154 aa4.39□□□□□ -1.71
TGFB1-203ENST00000598758 IFITM1P13164 125 aa4.39□□□□□ -1.71
TGFB1-203ENST00000598758 LINC01545Q5VT33 79 aa4.39□□□□□ -1.71
TGFB1-203ENST00000598758 SCGB1D4Q6XE38 83 aa4.39□□□□□ -1.71
TGFB1-203ENST00000598758 A0A087WSZ3 146 aa4.38□□□□□ -1.71
TGFB1-203ENST00000598758 SIGMAR1Q99720 223 aa4.38□□□□□ -1.71
TGFB1-203ENST00000598758 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
TGFB1-203ENST00000598758 LINC00313P59037 77 aa4.37□□□□□ -1.71
TGFB1-203ENST00000598758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.37□□□□□ -1.71
TGFB1-203ENST00000598758 VAMP3Q15836 100 aa4.36□□□□□ -1.71
TGFB1-203ENST00000598758 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
TGFB1-203ENST00000598758 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
TGFB1-203ENST00000598758 SNHG12Q9BXW3 62 aa4.36□□□□□ -1.71
TGFB1-203ENST00000598758 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
TGFB1-203ENST00000598758 MTURNQ8N3F0 131 aa4.35□□□□□ -1.71
TGFB1-203ENST00000598758 PPDPFLQ8WWR9 84 aa4.35□□□□□ -1.71
TGFB1-203ENST00000598758 SNRPEP62304 92 aaKnown RBP4.34□□□□□ -1.71
TGFB1-203ENST00000598758 A6NN06 94 aa4.33□□□□□ -1.72
TGFB1-203ENST00000598758 UBE2V1Q13404 147 aa4.33□□□□□ -1.72
TGFB1-203ENST00000598758 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
TGFB1-203ENST00000598758 TSTD3H0UI37 97 aa4.32□□□□□ -1.72
TGFB1-203ENST00000598758 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
TGFB1-203ENST00000598758 SPINK7P58062 85 aa4.32□□□□□ -1.72
TGFB1-203ENST00000598758 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
TGFB1-203ENST00000598758 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
TGFB1-203ENST00000598758 A0A1W2PNM2 257 aa4.31□□□□□ -1.72
TGFB1-203ENST00000598758 IGKV4-1P06312 121 aa4.31□□□□□ -1.72
TGFB1-203ENST00000598758 MT1BP07438 61 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms